RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
NR1I3-211ENST00000442691 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
NR1I3-211ENST00000442691 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NR1I3-211ENST00000442691 FKBP8Q14318 412 aa13.82□□□□□ -0.2
NR1I3-211ENST00000442691 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
NR1I3-211ENST00000442691 KIF14Q15058 1648 aa13.79□□□□□ -0.2
NR1I3-211ENST00000442691 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
NR1I3-211ENST00000442691 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
NR1I3-211ENST00000442691 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
NR1I3-211ENST00000442691 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NR1I3-211ENST00000442691 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-211ENST00000442691 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
NR1I3-211ENST00000442691 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
NR1I3-211ENST00000442691 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
NR1I3-211ENST00000442691 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
NR1I3-211ENST00000442691 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
NR1I3-211ENST00000442691 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
NR1I3-211ENST00000442691 GPATCH8Q9UKJ3 1502 aaKnown RBP13.69□□□□□ -0.22
NR1I3-211ENST00000442691 WDR7Q9Y4E6 1490 aa13.69□□□□□ -0.22
NR1I3-211ENST00000442691 AKNAQ7Z591 1439 aa13.68□□□□□ -0.22
NR1I3-211ENST00000442691 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
NR1I3-211ENST00000442691 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
NR1I3-211ENST00000442691 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
NR1I3-211ENST00000442691 CAPN15O75808 1086 aa13.67□□□□□ -0.22
NR1I3-211ENST00000442691 PREX2Q70Z35 1606 aa13.67□□□□□ -0.22
NR1I3-211ENST00000442691 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
NR1I3-211ENST00000442691 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
NR1I3-211ENST00000442691 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
NR1I3-211ENST00000442691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
NR1I3-211ENST00000442691 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
NR1I3-211ENST00000442691 PLEKHH2Q8IVE3 1493 aa13.64□□□□□ -0.23
NR1I3-211ENST00000442691 HRCP23327 699 aa13.64□□□□□ -0.23
NR1I3-211ENST00000442691 CAMSAP2Q08AD1 1489 aa13.63□□□□□ -0.23
NR1I3-211ENST00000442691 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
NR1I3-211ENST00000442691 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
NR1I3-211ENST00000442691 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
NR1I3-211ENST00000442691 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
NR1I3-211ENST00000442691 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
NR1I3-211ENST00000442691 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-211ENST00000442691 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
NR1I3-211ENST00000442691 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
NR1I3-211ENST00000442691 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
NR1I3-211ENST00000442691 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
NR1I3-211ENST00000442691 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
NR1I3-211ENST00000442691 PLCH2O75038 1416 aa13.61□□□□□ -0.23
NR1I3-211ENST00000442691 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
NR1I3-211ENST00000442691 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
NR1I3-211ENST00000442691 DAPK1P53355 1430 aa13.59□□□□□ -0.23
NR1I3-211ENST00000442691 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
NR1I3-211ENST00000442691 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
NR1I3-211ENST00000442691 POLA2Q14181 598 aa13.58□□□□□ -0.24
NR1I3-211ENST00000442691 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
NR1I3-211ENST00000442691 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
NR1I3-211ENST00000442691 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-211ENST00000442691 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
NR1I3-211ENST00000442691 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
NR1I3-211ENST00000442691 ABCC5O15440 1437 aa13.56□□□□□ -0.24
NR1I3-211ENST00000442691 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
NR1I3-211ENST00000442691 SAMD9LQ8IVG5 1584 aa13.55□□□□□ -0.24
NR1I3-211ENST00000442691 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
NR1I3-211ENST00000442691 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
NR1I3-211ENST00000442691 GLI2P10070 1586 aa13.54□□□□□ -0.24
NR1I3-211ENST00000442691 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
NR1I3-211ENST00000442691 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
NR1I3-211ENST00000442691 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
NR1I3-211ENST00000442691 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
NR1I3-211ENST00000442691 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NR1I3-211ENST00000442691 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
NR1I3-211ENST00000442691 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
NR1I3-211ENST00000442691 ABCC1P33527 1531 aa13.52□□□□□ -0.25
NR1I3-211ENST00000442691 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NR1I3-211ENST00000442691 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
NR1I3-211ENST00000442691 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
NR1I3-211ENST00000442691 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-211ENST00000442691 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
NR1I3-211ENST00000442691 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
NR1I3-211ENST00000442691 FANCAO15360 1455 aa13.48□□□□□ -0.25
NR1I3-211ENST00000442691 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
NR1I3-211ENST00000442691 ITGAEP38570 1179 aa13.48□□□□□ -0.25
NR1I3-211ENST00000442691 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
NR1I3-211ENST00000442691 NEO1Q92859 1461 aa13.48□□□□□ -0.25
NR1I3-211ENST00000442691 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
NR1I3-211ENST00000442691 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
NR1I3-211ENST00000442691 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NR1I3-211ENST00000442691 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-211ENST00000442691 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
NR1I3-211ENST00000442691 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
NR1I3-211ENST00000442691 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NR1I3-211ENST00000442691 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
NR1I3-211ENST00000442691 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
NR1I3-211ENST00000442691 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-211ENST00000442691 ABCB7O75027 752 aa13.44□□□□□ -0.26
NR1I3-211ENST00000442691 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
NR1I3-211ENST00000442691 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
NR1I3-211ENST00000442691 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
NR1I3-211ENST00000442691 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
NR1I3-211ENST00000442691 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
NR1I3-211ENST00000442691 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
NR1I3-211ENST00000442691 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
NR1I3-211ENST00000442691 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms