RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MYO5CQ9NQX4 1742 aa19.29■□□□□ 0.68
USP1-203ENST00000442679 ARHGAP5Q13017 1502 aa19.29■□□□□ 0.68
USP1-203ENST00000442679 GPATCH8Q9UKJ3 1502 aaKnown RBP19.28■□□□□ 0.68
USP1-203ENST00000442679 RAPGEF3O95398 923 aa19.27■□□□□ 0.68
USP1-203ENST00000442679 CFAP74Q9C0B2 1584 aa19.27■□□□□ 0.67
USP1-203ENST00000442679 CFDP1Q9UEE9 299 aaPredicted RBP19.26■□□□□ 0.67
USP1-203ENST00000442679 NCOA2Q15596 1464 aa19.26■□□□□ 0.67
USP1-203ENST00000442679 ZNF777Q9ULD5 760 aaPredicted RBP19.25■□□□□ 0.67
USP1-203ENST00000442679 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
USP1-203ENST00000442679 SCAPERQ9BY12 1400 aa19.24■□□□□ 0.67
USP1-203ENST00000442679 DENND4BO75064 1496 aaPredicted RBP19.23■□□□□ 0.67
USP1-203ENST00000442679 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
USP1-203ENST00000442679 SUPT6HQ7KZ85 1726 aaKnown RBP19.23■□□□□ 0.67
USP1-203ENST00000442679 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
USP1-203ENST00000442679 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
USP1-203ENST00000442679 CDC42BPAQ5VT25 1732 aa19.22■□□□□ 0.67
USP1-203ENST00000442679 AFAP1Q8N556 730 aa19.16■□□□□ 0.66
USP1-203ENST00000442679 ZNF644Q9H582 1327 aaPredicted RBP19.16■□□□□ 0.66
USP1-203ENST00000442679 POGZQ7Z3K3 1410 aa19.16■□□□□ 0.66
USP1-203ENST00000442679 HNRNPMP52272 730 aaKnown RBP eCLIP19.15■□□□□ 0.662e-9■■■■■ 36.1
USP1-203ENST00000442679 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
USP1-203ENST00000442679 ARHGEF12Q9NZN5 1544 aa19.14■□□□□ 0.65
USP1-203ENST00000442679 ITSN2Q9NZM3 1697 aa19.14■□□□□ 0.65
USP1-203ENST00000442679 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
USP1-203ENST00000442679 ABCC1P33527 1531 aa19.13■□□□□ 0.65
USP1-203ENST00000442679 SAMD9LQ8IVG5 1584 aa19.13■□□□□ 0.65
USP1-203ENST00000442679 PLEKHH2Q8IVE3 1493 aa19.12■□□□□ 0.65
USP1-203ENST00000442679 MYOM3Q5VTT5 1437 aa19.12■□□□□ 0.65
USP1-203ENST00000442679 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
USP1-203ENST00000442679 RICTORQ6R327 1708 aa19.11■□□□□ 0.65
USP1-203ENST00000442679 ZNF518AQ6AHZ1 1483 aa19.11■□□□□ 0.65
USP1-203ENST00000442679 TRAPPC8Q9Y2L5 1435 aa19.11■□□□□ 0.65
USP1-203ENST00000442679 MYT1LQ9UL68 1186 aa19.1■□□□□ 0.65
USP1-203ENST00000442679 SYCP2Q9BX26 1530 aa19.08■□□□□ 0.64
USP1-203ENST00000442679 MAGI2Q86UL8 1455 aa19.08■□□□□ 0.64
USP1-203ENST00000442679 MIA2Q96PC5 1412 aa19.08■□□□□ 0.64
USP1-203ENST00000442679 ZMYM4Q5VZL5 1548 aa19.07■□□□□ 0.64
USP1-203ENST00000442679 CAMSAP2Q08AD1 1489 aa19.07■□□□□ 0.64
USP1-203ENST00000442679 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
USP1-203ENST00000442679 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
USP1-203ENST00000442679 KDM5CP41229 1560 aa19.04■□□□□ 0.64
USP1-203ENST00000442679 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
USP1-203ENST00000442679 YEATS2Q9ULM3 1422 aa19.04■□□□□ 0.64
USP1-203ENST00000442679 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
USP1-203ENST00000442679 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
USP1-203ENST00000442679 FGD6Q6ZV73 1430 aa19.02■□□□□ 0.64
USP1-203ENST00000442679 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
USP1-203ENST00000442679 ARID4BQ4LE39 1312 aaPredicted RBP19■□□□□ 0.63
USP1-203ENST00000442679 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
USP1-203ENST00000442679 ATP10AO60312 1499 aa18.98■□□□□ 0.63
USP1-203ENST00000442679 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
USP1-203ENST00000442679 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
USP1-203ENST00000442679 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
USP1-203ENST00000442679 PTPN23Q9H3S7 1636 aa18.97■□□□□ 0.63
USP1-203ENST00000442679 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
USP1-203ENST00000442679 ARHGEF5Q12774 1597 aa18.96■□□□□ 0.63
USP1-203ENST00000442679 TCOF1Q13428 1488 aaKnown RBP18.96■□□□□ 0.63
USP1-203ENST00000442679 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
USP1-203ENST00000442679 KDM4FA0A1W2PPD8 638 aa18.94■□□□□ 0.62
USP1-203ENST00000442679 RTEL1-TNFRSF6BF6WH68 1400 aa18.93■□□□□ 0.62
USP1-203ENST00000442679 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
USP1-203ENST00000442679 KIDINS220Q9ULH0 1771 aa18.93■□□□□ 0.62
USP1-203ENST00000442679 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
USP1-203ENST00000442679 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
USP1-203ENST00000442679 INO80Q9ULG1 1556 aaPredicted RBP18.9■□□□□ 0.62
USP1-203ENST00000442679 ABCC5O15440 1437 aa18.9■□□□□ 0.62
USP1-203ENST00000442679 MLECQ14165 292 aa18.89■□□□□ 0.61
USP1-203ENST00000442679 DAPK1P53355 1430 aa18.88■□□□□ 0.61
USP1-203ENST00000442679 REREQ9P2R6 1566 aa18.86■□□□□ 0.61
USP1-203ENST00000442679 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
USP1-203ENST00000442679 A2MP01023 1474 aa18.85■□□□□ 0.61
USP1-203ENST00000442679 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
USP1-203ENST00000442679 DHX29Q7Z478 1369 aaKnown RBP18.84■□□□□ 0.61
USP1-203ENST00000442679 DNMT1P26358 1616 aaKnown RBP18.84■□□□□ 0.61
USP1-203ENST00000442679 MAST1Q9Y2H9 1570 aa18.84■□□□□ 0.61
USP1-203ENST00000442679 SHANK2Q9UPX8 1470 aa18.83■□□□□ 0.6
USP1-203ENST00000442679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.82■□□□□ 0.6
USP1-203ENST00000442679 AGLP35573 1532 aa18.82■□□□□ 0.6
USP1-203ENST00000442679 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
USP1-203ENST00000442679 ITGAEP38570 1179 aa18.81■□□□□ 0.6
USP1-203ENST00000442679 RRP7BPQ9NSQ0 103 aa18.81■□□□□ 0.6
USP1-203ENST00000442679 RRBP1Q9P2E9 1410 aaKnown RBP18.81■□□□□ 0.6
USP1-203ENST00000442679 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
USP1-203ENST00000442679 ANKRD30AQ9BXX3 1397 aa18.79■□□□□ 0.6
USP1-203ENST00000442679 PLXNC1O60486 1568 aa18.78■□□□□ 0.6
USP1-203ENST00000442679 CROCC2H7BZ55 1655 aa18.78■□□□□ 0.6
USP1-203ENST00000442679 ADAMTSL3P82987 1691 aa18.78■□□□□ 0.6
USP1-203ENST00000442679 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
USP1-203ENST00000442679 PTPRKQ15262 1439 aa18.77■□□□□ 0.6
USP1-203ENST00000442679 KIF3BO15066 747 aa18.77■□□□□ 0.6
USP1-203ENST00000442679 GGT6Q6P531 493 aa18.77■□□□□ 0.6
USP1-203ENST00000442679 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
USP1-203ENST00000442679 ESF1Q9H501 851 aaKnown RBP18.75■□□□□ 0.59
USP1-203ENST00000442679 MADDQ8WXG6 1647 aa18.74■□□□□ 0.59
USP1-203ENST00000442679 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
USP1-203ENST00000442679 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
USP1-203ENST00000442679 PTPRMP28827 1452 aa18.71■□□□□ 0.59
USP1-203ENST00000442679 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
USP1-203ENST00000442679 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
USP1-203ENST00000442679 ROCK1Q13464 1354 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms