RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
TRIM13-205ENST00000442421 MLECQ14165 292 aa21.42■■□□□ 1.02
TRIM13-205ENST00000442421 SCAPERQ9BY12 1400 aa21.42■■□□□ 1.02
TRIM13-205ENST00000442421 PLCH2O75038 1416 aa21.41■■□□□ 1.02
TRIM13-205ENST00000442421 KIF14Q15058 1648 aa21.39■■□□□ 1.01
TRIM13-205ENST00000442421 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
TRIM13-205ENST00000442421 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
TRIM13-205ENST00000442421 ARHGEF12Q9NZN5 1544 aa21.35■■□□□ 1.01
TRIM13-205ENST00000442421 LRRIQ1Q96JM4 1722 aa21.35■■□□□ 1.01
TRIM13-205ENST00000442421 PREX1Q8TCU6 1659 aa21.34■■□□□ 1.01
TRIM13-205ENST00000442421 ATP10AO60312 1499 aa21.34■■□□□ 1.01
TRIM13-205ENST00000442421 FMN1Q68DA7 1419 aa21.34■■□□□ 1.01
TRIM13-205ENST00000442421 ARHGAP35Q9NRY4 1499 aa21.33■■□□□ 1.01
TRIM13-205ENST00000442421 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
TRIM13-205ENST00000442421 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
TRIM13-205ENST00000442421 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
TRIM13-205ENST00000442421 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
TRIM13-205ENST00000442421 KDM5CP41229 1560 aa21.28■■□□□ 1
TRIM13-205ENST00000442421 ZNF518AQ6AHZ1 1483 aa21.28■■□□□ 1
TRIM13-205ENST00000442421 CDC42BPBQ9Y5S2 1711 aa21.27■■□□□ 1
TRIM13-205ENST00000442421 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
TRIM13-205ENST00000442421 CEBPAP49715 358 aaPredicted RBP21.26■□□□□ 0.99
TRIM13-205ENST00000442421 CERKQ8TCT0 537 aa21.26■□□□□ 0.99
TRIM13-205ENST00000442421 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
TRIM13-205ENST00000442421 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
TRIM13-205ENST00000442421 STRCQ7RTU9 1775 aa21.25■□□□□ 0.99
TRIM13-205ENST00000442421 SETD1BQ9UPS6 1966 aaKnown RBP21.23■□□□□ 0.99
TRIM13-205ENST00000442421 CLIP1P30622 1438 aa21.23■□□□□ 0.99
TRIM13-205ENST00000442421 ABCA6Q8N139 1617 aa21.23■□□□□ 0.99
TRIM13-205ENST00000442421 AFAP1Q8N556 730 aa21.23■□□□□ 0.99
TRIM13-205ENST00000442421 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
TRIM13-205ENST00000442421 MYT1LQ9UL68 1186 aa21.2■□□□□ 0.98
TRIM13-205ENST00000442421 C3P01024 1663 aa21.2■□□□□ 0.98
TRIM13-205ENST00000442421 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
TRIM13-205ENST00000442421 ITSN2Q9NZM3 1697 aa21.19■□□□□ 0.98
TRIM13-205ENST00000442421 ABCC1P33527 1531 aa21.16■□□□□ 0.98
TRIM13-205ENST00000442421 UHRF1BP1Q6BDS2 1440 aa21.16■□□□□ 0.98
TRIM13-205ENST00000442421 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
TRIM13-205ENST00000442421 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.98
TRIM13-205ENST00000442421 TRAPPC8Q9Y2L5 1435 aa21.13■□□□□ 0.97
TRIM13-205ENST00000442421 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
TRIM13-205ENST00000442421 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
TRIM13-205ENST00000442421 AGLP35573 1532 aa21.1■□□□□ 0.97
TRIM13-205ENST00000442421 DMRT2Q9Y5R5 561 aa21.09■□□□□ 0.97
TRIM13-205ENST00000442421 CASKIN1Q8WXD9 1431 aa21.09■□□□□ 0.97
TRIM13-205ENST00000442421 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
TRIM13-205ENST00000442421 SAMD9LQ8IVG5 1584 aa21.04■□□□□ 0.96
TRIM13-205ENST00000442421 SUPT6HQ7KZ85 1726 aaKnown RBP21.03■□□□□ 0.96
TRIM13-205ENST00000442421 PTPRTO14522 1441 aa21.03■□□□□ 0.96
TRIM13-205ENST00000442421 MROH2AA6NES4 1674 aa21.02■□□□□ 0.95
TRIM13-205ENST00000442421 FYCO1Q9BQS8 1478 aa21.01■□□□□ 0.95
TRIM13-205ENST00000442421 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
TRIM13-205ENST00000442421 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
TRIM13-205ENST00000442421 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
TRIM13-205ENST00000442421 LTBP4Q8N2S1 1624 aa20.99■□□□□ 0.95
TRIM13-205ENST00000442421 DISP3Q9P2K9 1392 aa20.98■□□□□ 0.95
TRIM13-205ENST00000442421 NCOA1Q15788 1441 aa20.97■□□□□ 0.95
TRIM13-205ENST00000442421 CLTCQ00610 1675 aaKnown RBP20.97■□□□□ 0.95
TRIM13-205ENST00000442421 CAMSAP1Q5T5Y3 1602 aa20.96■□□□□ 0.95
TRIM13-205ENST00000442421 GPATCH8Q9UKJ3 1502 aaKnown RBP20.95■□□□□ 0.94
TRIM13-205ENST00000442421 ATP7AQ04656 1500 aa20.94■□□□□ 0.94
TRIM13-205ENST00000442421 INO80Q9ULG1 1556 aaPredicted RBP20.93■□□□□ 0.94
TRIM13-205ENST00000442421 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
TRIM13-205ENST00000442421 ILDR2Q71H61 639 aa20.93■□□□□ 0.94
TRIM13-205ENST00000442421 SPAG9O60271 1321 aaKnown RBP20.93■□□□□ 0.94
TRIM13-205ENST00000442421 NPATQ14207 1427 aa20.93■□□□□ 0.94
TRIM13-205ENST00000442421 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
TRIM13-205ENST00000442421 SPATA31D1Q6ZQQ2 1576 aa20.91■□□□□ 0.94
TRIM13-205ENST00000442421 MYO3AQ8NEV4 1616 aa20.91■□□□□ 0.94
TRIM13-205ENST00000442421 ZNF142P52746 1687 aaPredicted RBP20.9■□□□□ 0.94
TRIM13-205ENST00000442421 ZMYM3Q14202 1370 aa20.9■□□□□ 0.94
TRIM13-205ENST00000442421 IQSEC2Q5JU85 1478 aa20.88■□□□□ 0.93
TRIM13-205ENST00000442421 A2MP01023 1474 aa20.88■□□□□ 0.93
TRIM13-205ENST00000442421 ADGBQ8N7X0 1667 aa20.86■□□□□ 0.93
TRIM13-205ENST00000442421 PLEKHH2Q8IVE3 1493 aa20.86■□□□□ 0.93
TRIM13-205ENST00000442421 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
TRIM13-205ENST00000442421 NCKAP5LQ9HCH0 1330 aa20.85■□□□□ 0.93
TRIM13-205ENST00000442421 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
TRIM13-205ENST00000442421 CEP170BQ9Y4F5 1589 aaPredicted RBP20.85■□□□□ 0.93
TRIM13-205ENST00000442421 CCNB3Q8WWL7 1395 aa20.85■□□□□ 0.93
TRIM13-205ENST00000442421 PTPRKQ15262 1439 aa20.82■□□□□ 0.92
TRIM13-205ENST00000442421 ZNF335Q9H4Z2 1342 aaPredicted RBP20.81■□□□□ 0.92
TRIM13-205ENST00000442421 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
TRIM13-205ENST00000442421 SOCS7O14512 581 aa20.81■□□□□ 0.92
TRIM13-205ENST00000442421 GGT6Q6P531 493 aa20.81■□□□□ 0.92
TRIM13-205ENST00000442421 MTUS2Q5JR59 1369 aa20.81■□□□□ 0.92
TRIM13-205ENST00000442421 PLA2R1Q13018 1463 aa20.8■□□□□ 0.92
TRIM13-205ENST00000442421 TCOF1Q13428 1488 aaKnown RBP20.78■□□□□ 0.92
TRIM13-205ENST00000442421 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
TRIM13-205ENST00000442421 EHBP1L1Q8N3D4 1523 aa20.75■□□□□ 0.91
TRIM13-205ENST00000442421 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-205ENST00000442421 PKD2Q13563 968 aa20.74■□□□□ 0.91
TRIM13-205ENST00000442421 DNMT1P26358 1616 aaKnown RBP20.74■□□□□ 0.91
TRIM13-205ENST00000442421 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
TRIM13-205ENST00000442421 UBAP1LF5GYI3 381 aa20.73■□□□□ 0.91
TRIM13-205ENST00000442421 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
TRIM13-205ENST00000442421 PPP6R1Q9UPN7 881 aa20.7■□□□□ 0.9
TRIM13-205ENST00000442421 RTEL1-TNFRSF6BF6WH68 1400 aa20.69■□□□□ 0.9
TRIM13-205ENST00000442421 CEP162Q5TB80 1403 aa20.68■□□□□ 0.9
TRIM13-205ENST00000442421 DHX29Q7Z478 1369 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms