RNA–Protein interactions for RNA: ENST00000442138.6

PRRC1-202, Transcript of proline rich coiled-coil 1, humanhuman

TSL 1 (best) BASIC

Gene PRRC1, Length 5,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC1-202ENST00000442138 DCTN1Q14203 1278 aa8.7□□□□□ -1.02
PRRC1-202ENST00000442138 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.7□□□□□ -1.02
PRRC1-202ENST00000442138 ARGLU1Q9NWB6 273 aaPredicted RBP8.7□□□□□ -1.02
PRRC1-202ENST00000442138 TPM1P09493 284 aa8.7□□□□□ -1.02
PRRC1-202ENST00000442138 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
PRRC1-202ENST00000442138 CCAR2Q8N163 923 aaKnown RBP8.69□□□□□ -1.02
PRRC1-202ENST00000442138 SKOR2Q2VWA4 1001 aaPredicted RBP8.69□□□□□ -1.02
PRRC1-202ENST00000442138 KDM2AQ9Y2K7 1162 aa8.69□□□□□ -1.02
PRRC1-202ENST00000442138 AK7Q96M32 723 aa8.69□□□□□ -1.02
PRRC1-202ENST00000442138 H0YHG0 523 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 FAM13BQ9NYF5 915 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 HSP90B2PQ58FF3 399 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 NEFHP12036 1026 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 PDE4CQ08493 712 aa8.68□□□□□ -1.02
PRRC1-202ENST00000442138 RUFY1Q96T51 708 aa8.67□□□□□ -1.02
PRRC1-202ENST00000442138 IPO7O95373 1038 aaKnown RBP8.67□□□□□ -1.02
PRRC1-202ENST00000442138 FBLN2P98095 1184 aa8.67□□□□□ -1.02
PRRC1-202ENST00000442138 GSE1Q14687 1217 aa8.67□□□□□ -1.02
PRRC1-202ENST00000442138 GOLGA6L19H0YKK7 550 aa8.66□□□□□ -1.02
PRRC1-202ENST00000442138 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
PRRC1-202ENST00000442138 TSPY4P0CV99 314 aa8.65□□□□□ -1.02
PRRC1-202ENST00000442138 TSPY10P0CW01 314 aa8.65□□□□□ -1.02
PRRC1-202ENST00000442138 NEXNQ0ZGT2 675 aa8.65□□□□□ -1.02
PRRC1-202ENST00000442138 NEUROD2Q15784 382 aa8.65□□□□□ -1.03
PRRC1-202ENST00000442138 RASSF8Q8NHQ8 419 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 RWDD1Q9H446 243 aaPredicted RBP8.64□□□□□ -1.03
PRRC1-202ENST00000442138 ISY1Q9ULR0 285 aaKnown RBP8.64□□□□□ -1.03
PRRC1-202ENST00000442138 TPM2P07951 284 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 CHMP4CQ96CF2 233 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 BECN2A8MW95 431 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 IPO8O15397 1037 aaKnown RBP8.64□□□□□ -1.03
PRRC1-202ENST00000442138 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 KIF16BQ96L93 1317 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 ATP6V1DQ9Y5K8 247 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 NPHP1O15259 732 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 USP8P40818 1118 aa8.64□□□□□ -1.03
PRRC1-202ENST00000442138 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
PRRC1-202ENST00000442138 FAM43AQ8N2R8 423 aa8.63□□□□□ -1.03
PRRC1-202ENST00000442138 DIAPH3Q9NSV4 1193 aa8.63□□□□□ -1.03
PRRC1-202ENST00000442138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■□□□□ 10.7
PRRC1-202ENST00000442138 ERCC4Q92889 916 aaPredicted RBP8.63□□□□□ -1.03
PRRC1-202ENST00000442138 TIMELESSQ9UNS1 1208 aa8.63□□□□□ -1.03
PRRC1-202ENST00000442138 TPD52L1Q16890 204 aaPredicted RBP8.62□□□□□ -1.03
PRRC1-202ENST00000442138 HIRIP3Q9BW71 556 aaPredicted RBP8.62□□□□□ -1.03
PRRC1-202ENST00000442138 SF3A1Q15459 793 aaKnown RBP8.62□□□□□ -1.03
PRRC1-202ENST00000442138 HSP90AB3PQ58FF7 597 aa8.62□□□□□ -1.03
PRRC1-202ENST00000442138 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
PRRC1-202ENST00000442138 ST18O60284 1047 aa8.61□□□□□ -1.03
PRRC1-202ENST00000442138 ZRSR2Q15696 482 aaKnown RBP8.61□□□□□ -1.03
PRRC1-202ENST00000442138 ZNF592Q92610 1267 aa8.61□□□□□ -1.03
PRRC1-202ENST00000442138 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
PRRC1-202ENST00000442138 MNS1Q8NEH6 495 aa8.61□□□□□ -1.03
PRRC1-202ENST00000442138 INCENPQ9NQS7 918 aa8.61□□□□□ -1.03
PRRC1-202ENST00000442138 CREBRFQ8IUR6 639 aa8.61□□□□□ -1.03
PRRC1-202ENST00000442138 DYDC1Q8WWB3 177 aa8.6□□□□□ -1.03
PRRC1-202ENST00000442138 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
PRRC1-202ENST00000442138 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
PRRC1-202ENST00000442138 PMFBP1Q8TBY8 1022 aa8.6□□□□□ -1.03
PRRC1-202ENST00000442138 ANKRD20A12PQ8NF67 263 aa8.6□□□□□ -1.03
PRRC1-202ENST00000442138 GOLGA6L7A0A1B0GV03 622 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 PES1O00541 588 aaKnown RBP8.59□□□□□ -1.03
PRRC1-202ENST00000442138 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.59□□□□□ -1.03
PRRC1-202ENST00000442138 CHMP4AQ9BY43 222 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 TAF3Q5VWG9 929 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 LEKR1Q6ZMV7 388 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 PLCD4Q9BRC7 762 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
PRRC1-202ENST00000442138 TSPYL1Q9H0U9 437 aa8.58□□□□□ -1.04
PRRC1-202ENST00000442138 DEF6Q9H4E7 631 aa8.58□□□□□ -1.04
PRRC1-202ENST00000442138 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
PRRC1-202ENST00000442138 GPATCH3Q96I76 525 aa8.58□□□□□ -1.04
PRRC1-202ENST00000442138 MFAP1P55081 439 aaKnown RBP8.57□□□□□ -1.04
PRRC1-202ENST00000442138 CAGE1Q8TC20 777 aa8.56□□□□□ -1.04
PRRC1-202ENST00000442138 HMGN5P82970 282 aaKnown RBP8.56□□□□□ -1.04
PRRC1-202ENST00000442138 CCDC173Q0VFZ6 552 aa8.56□□□□□ -1.04
PRRC1-202ENST00000442138 MYO6Q9UM54 1294 aa8.56□□□□□ -1.04
PRRC1-202ENST00000442138 CARD11Q9BXL7 1154 aa8.56□□□□□ -1.04
PRRC1-202ENST00000442138 NPM1P06748 294 aaKnown RBP eCLIP8.55□□□□□ -1.04
PRRC1-202ENST00000442138 U2SURPO15042 1029 aaKnown RBP8.55□□□□□ -1.04
PRRC1-202ENST00000442138 KIAA0754O94854 1291 aa8.55□□□□□ -1.04
PRRC1-202ENST00000442138 CCDC47Q96A33 483 aaKnown RBP8.55□□□□□ -1.04
PRRC1-202ENST00000442138 FBXO3Q9UK99 471 aa8.54□□□□□ -1.04
PRRC1-202ENST00000442138 MARCH6O60337 910 aa8.54□□□□□ -1.04
PRRC1-202ENST00000442138 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
PRRC1-202ENST00000442138 HOOK1Q9UJC3 728 aaKnown RBP8.53□□□□□ -1.04
PRRC1-202ENST00000442138 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
PRRC1-202ENST00000442138 H3BQV1 296 aa8.53□□□□□ -1.04
PRRC1-202ENST00000442138 IFFO2Q5TF58 517 aa8.53□□□□□ -1.04
PRRC1-202ENST00000442138 PLPPR3Q6T4P5 718 aa8.53□□□□□ -1.04
PRRC1-202ENST00000442138 PRKCSHP14314 528 aaPredicted RBP8.52□□□□□ -1.05
PRRC1-202ENST00000442138 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
PRRC1-202ENST00000442138 MTUS2Q5JR59 1369 aa8.52□□□□□ -1.05
PRRC1-202ENST00000442138 CCDC39Q9UFE4 941 aa8.52□□□□□ -1.05
PRRC1-202ENST00000442138 PCMTD1Q96MG8 357 aaPredicted RBP8.52□□□□□ -1.05
PRRC1-202ENST00000442138 APBB1O00213 710 aa8.51□□□□□ -1.05
PRRC1-202ENST00000442138 R3HCC1Q9Y3T6 440 aaKnown RBP8.51□□□□□ -1.05
PRRC1-202ENST00000442138 FAM184AQ8NB25 1140 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms