RNA–Protein interactions for RNA: ENST00000441787.5

PRDM15-205, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-205ENST00000441787 CCDC180Q9P1Z9 1646 aa13.03□□□□□ -0.32
PRDM15-205ENST00000441787 NUTM2FA1L443 756 aa13.03□□□□□ -0.32
PRDM15-205ENST00000441787 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
PRDM15-205ENST00000441787 PKD2Q13563 968 aa13.03□□□□□ -0.32
PRDM15-205ENST00000441787 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
PRDM15-205ENST00000441787 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.02□□□□□ -0.32
PRDM15-205ENST00000441787 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.32
PRDM15-205ENST00000441787 GNL2Q13823 731 aaKnown RBP13.02□□□□□ -0.33
PRDM15-205ENST00000441787 TNIKQ9UKE5 1360 aa13.02□□□□□ -0.33
PRDM15-205ENST00000441787 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
PRDM15-205ENST00000441787 CHMP4BQ9H444 224 aaKnown RBP13.01□□□□□ -0.33
PRDM15-205ENST00000441787 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
PRDM15-205ENST00000441787 HSCBQ8IWL3 235 aa13.01□□□□□ -0.33
PRDM15-205ENST00000441787 CARMIL1Q5VZK9 1371 aa13.01□□□□□ -0.33
PRDM15-205ENST00000441787 MS4A1P11836 297 aa13□□□□□ -0.33
PRDM15-205ENST00000441787 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
PRDM15-205ENST00000441787 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRDM15-205ENST00000441787 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
PRDM15-205ENST00000441787 LTV1Q96GA3 475 aaPredicted RBP12.99□□□□□ -0.33
PRDM15-205ENST00000441787 DRC7Q8IY82 874 aa12.98□□□□□ -0.33
PRDM15-205ENST00000441787 MCCP23508 829 aa12.98□□□□□ -0.33
PRDM15-205ENST00000441787 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
PRDM15-205ENST00000441787 ERICH6BQ5W0A0 696 aa12.97□□□□□ -0.33
PRDM15-205ENST00000441787 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
PRDM15-205ENST00000441787 SOGA1O94964 1423 aa12.97□□□□□ -0.33
PRDM15-205ENST00000441787 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
PRDM15-205ENST00000441787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRDM15-205ENST00000441787 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.343e-8■■■■■ 32
PRDM15-205ENST00000441787 PDE4CQ08493 712 aa12.94□□□□□ -0.34
PRDM15-205ENST00000441787 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
PRDM15-205ENST00000441787 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
PRDM15-205ENST00000441787 GORABQ5T7V8 394 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
PRDM15-205ENST00000441787 KIF3BO15066 747 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 ARHGAP35Q9NRY4 1499 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 KIAA1211Q6ZU35 1233 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
PRDM15-205ENST00000441787 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
PRDM15-205ENST00000441787 G3V3G9 751 aa12.92□□□□□ -0.34
PRDM15-205ENST00000441787 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
PRDM15-205ENST00000441787 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
PRDM15-205ENST00000441787 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
PRDM15-205ENST00000441787 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
PRDM15-205ENST00000441787 HSP90B1P14625 803 aaKnown RBP12.91□□□□□ -0.34
PRDM15-205ENST00000441787 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
PRDM15-205ENST00000441787 NUP155O75694 1391 aa12.91□□□□□ -0.34
PRDM15-205ENST00000441787 NACADO15069 1562 aa12.91□□□□□ -0.34
PRDM15-205ENST00000441787 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
PRDM15-205ENST00000441787 SETD5Q9C0A6 1442 aa12.89□□□□□ -0.35
PRDM15-205ENST00000441787 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
PRDM15-205ENST00000441787 GZF1Q9H116 711 aaPredicted RBP12.89□□□□□ -0.35
PRDM15-205ENST00000441787 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
PRDM15-205ENST00000441787 ABCC8Q09428 1581 aa12.88□□□□□ -0.35
PRDM15-205ENST00000441787 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
PRDM15-205ENST00000441787 NRDCO43847 1150 aa12.88□□□□□ -0.35
PRDM15-205ENST00000441787 MPHOSPH9Q99550 1183 aa12.88□□□□□ -0.35
PRDM15-205ENST00000441787 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
PRDM15-205ENST00000441787 EID1Q9Y6B2 187 aa12.87□□□□□ -0.35
PRDM15-205ENST00000441787 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
PRDM15-205ENST00000441787 ARID3AQ99856 593 aa12.87□□□□□ -0.35
PRDM15-205ENST00000441787 AMPHP49418 695 aa12.87□□□□□ -0.35
PRDM15-205ENST00000441787 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
PRDM15-205ENST00000441787 WASHC2CQ9Y4E1 1318 aa12.86□□□□□ -0.35
PRDM15-205ENST00000441787 MFAP1P55081 439 aaKnown RBP12.86□□□□□ -0.35
PRDM15-205ENST00000441787 SPAG9O60271 1321 aaKnown RBP12.86□□□□□ -0.35
PRDM15-205ENST00000441787 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
PRDM15-205ENST00000441787 MSH5O43196 834 aa12.86□□□□□ -0.35
PRDM15-205ENST00000441787 CREBRFQ8IUR6 639 aa12.86□□□□□ -0.35
PRDM15-205ENST00000441787 SLKQ9H2G2 1235 aaPredicted RBP12.86□□□□□ -0.35
PRDM15-205ENST00000441787 EFCAB2Q5VUJ9 269 aa12.85□□□□□ -0.35
PRDM15-205ENST00000441787 PRM3Q9NNZ6 103 aa12.85□□□□□ -0.35
PRDM15-205ENST00000441787 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
PRDM15-205ENST00000441787 FRAT2O75474 233 aaPredicted RBP12.85□□□□□ -0.35
PRDM15-205ENST00000441787 RRP7AQ9Y3A4 280 aaKnown RBP12.85□□□□□ -0.35
PRDM15-205ENST00000441787 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
PRDM15-205ENST00000441787 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
PRDM15-205ENST00000441787 MSNP26038 577 aaKnown RBP12.84□□□□□ -0.35
PRDM15-205ENST00000441787 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
PRDM15-205ENST00000441787 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
PRDM15-205ENST00000441787 CHAF1AQ13111 956 aaPredicted RBP12.83□□□□□ -0.36
PRDM15-205ENST00000441787 BAZ1AQ9NRL2 1556 aaPredicted RBP12.83□□□□□ -0.36
PRDM15-205ENST00000441787 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
PRDM15-205ENST00000441787 NGEFQ8N5V2 710 aa12.82□□□□□ -0.36
PRDM15-205ENST00000441787 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
PRDM15-205ENST00000441787 CALD1Q05682 793 aaKnown RBP12.82□□□□□ -0.36
PRDM15-205ENST00000441787 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
PRDM15-205ENST00000441787 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
PRDM15-205ENST00000441787 RASSF8Q8NHQ8 419 aa12.81□□□□□ -0.36
PRDM15-205ENST00000441787 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
PRDM15-205ENST00000441787 ANKRD30AQ9BXX3 1397 aa12.8□□□□□ -0.36
PRDM15-205ENST00000441787 ELL2O00472 640 aaPredicted RBP12.8□□□□□ -0.36
PRDM15-205ENST00000441787 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
PRDM15-205ENST00000441787 EIF3AQ14152 1382 aaKnown RBP12.8□□□□□ -0.36
PRDM15-205ENST00000441787 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
PRDM15-205ENST00000441787 GPATCH3Q96I76 525 aa12.79□□□□□ -0.36
PRDM15-205ENST00000441787 EVA1CP58658 441 aa12.79□□□□□ -0.36
PRDM15-205ENST00000441787 RAB3GAP2Q9H2M9 1393 aa12.79□□□□□ -0.36
PRDM15-205ENST00000441787 RAD21O60216 631 aa12.78□□□□□ -0.36
PRDM15-205ENST00000441787 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms