RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 PIAS4Q8N2W9 510 aaPredicted RBP18.68■□□□□ 0.58
EBF3-203ENST00000440978 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
EBF3-203ENST00000440978 FANCAO15360 1455 aa18.66■□□□□ 0.58
EBF3-203ENST00000440978 KDM6BO15054 1643 aa18.65■□□□□ 0.58
EBF3-203ENST00000440978 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
EBF3-203ENST00000440978 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
EBF3-203ENST00000440978 CDC42BPAQ5VT25 1732 aa18.64■□□□□ 0.57
EBF3-203ENST00000440978 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
EBF3-203ENST00000440978 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
EBF3-203ENST00000440978 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
EBF3-203ENST00000440978 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
EBF3-203ENST00000440978 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
EBF3-203ENST00000440978 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
EBF3-203ENST00000440978 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
EBF3-203ENST00000440978 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
EBF3-203ENST00000440978 ADGRL1O94910 1474 aa18.57■□□□□ 0.56
EBF3-203ENST00000440978 COL17A1Q9UMD9 1497 aaPredicted RBP18.57■□□□□ 0.56
EBF3-203ENST00000440978 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
EBF3-203ENST00000440978 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
EBF3-203ENST00000440978 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
EBF3-203ENST00000440978 MYOM3Q5VTT5 1437 aa18.53■□□□□ 0.56
EBF3-203ENST00000440978 SCAPERQ9BY12 1400 aa18.53■□□□□ 0.56
EBF3-203ENST00000440978 ABCC1P33527 1531 aa18.53■□□□□ 0.56
EBF3-203ENST00000440978 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
EBF3-203ENST00000440978 MIA2Q96PC5 1412 aa18.51■□□□□ 0.55
EBF3-203ENST00000440978 RICTORQ6R327 1708 aa18.5■□□□□ 0.55
EBF3-203ENST00000440978 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
EBF3-203ENST00000440978 POGZQ7Z3K3 1410 aa18.49■□□□□ 0.55
EBF3-203ENST00000440978 KIAA1107Q9UPP5 1409 aa18.49■□□□□ 0.55
EBF3-203ENST00000440978 ADRA2BP18089 450 aa18.49■□□□□ 0.55
EBF3-203ENST00000440978 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
EBF3-203ENST00000440978 ZNF518AQ6AHZ1 1483 aa18.48■□□□□ 0.55
EBF3-203ENST00000440978 PLPPR3Q6T4P5 718 aa18.48■□□□□ 0.55
EBF3-203ENST00000440978 RAPGEF3O95398 923 aa18.47■□□□□ 0.55
EBF3-203ENST00000440978 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
EBF3-203ENST00000440978 ZMYM4Q5VZL5 1548 aa18.46■□□□□ 0.55
EBF3-203ENST00000440978 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
EBF3-203ENST00000440978 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
EBF3-203ENST00000440978 KDM5CP41229 1560 aa18.44■□□□□ 0.54
EBF3-203ENST00000440978 FGD6Q6ZV73 1430 aa18.44■□□□□ 0.54
EBF3-203ENST00000440978 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
EBF3-203ENST00000440978 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
EBF3-203ENST00000440978 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
EBF3-203ENST00000440978 MBD5Q9P267 1494 aa18.41■□□□□ 0.54
EBF3-203ENST00000440978 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
EBF3-203ENST00000440978 RSPH4AQ5TD94 716 aa18.41■□□□□ 0.54
EBF3-203ENST00000440978 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
EBF3-203ENST00000440978 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
EBF3-203ENST00000440978 ARHGEF5Q12774 1597 aa18.4■□□□□ 0.54
EBF3-203ENST00000440978 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
EBF3-203ENST00000440978 MLH3Q9UHC1 1453 aa18.39■□□□□ 0.54
EBF3-203ENST00000440978 PPARGC1BQ86YN6 1023 aaKnown RBP18.39■□□□□ 0.53
EBF3-203ENST00000440978 HECW2Q9P2P5 1572 aa18.38■□□□□ 0.53
EBF3-203ENST00000440978 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
EBF3-203ENST00000440978 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
EBF3-203ENST00000440978 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
EBF3-203ENST00000440978 SPAG9O60271 1321 aaKnown RBP18.34■□□□□ 0.53
EBF3-203ENST00000440978 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
EBF3-203ENST00000440978 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
EBF3-203ENST00000440978 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
EBF3-203ENST00000440978 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
EBF3-203ENST00000440978 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
EBF3-203ENST00000440978 TSPY4P0CV99 314 aa18.31■□□□□ 0.52
EBF3-203ENST00000440978 TSPY10P0CW01 314 aa18.31■□□□□ 0.52
EBF3-203ENST00000440978 MYT1LQ9UL68 1186 aa18.31■□□□□ 0.52
EBF3-203ENST00000440978 DNMT1P26358 1616 aaKnown RBP18.31■□□□□ 0.52
EBF3-203ENST00000440978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
EBF3-203ENST00000440978 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
EBF3-203ENST00000440978 ATP10AO60312 1499 aa18.3■□□□□ 0.52
EBF3-203ENST00000440978 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
EBF3-203ENST00000440978 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
EBF3-203ENST00000440978 ABCA6Q8N139 1617 aa18.29■□□□□ 0.52
EBF3-203ENST00000440978 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
EBF3-203ENST00000440978 CROCC2H7BZ55 1655 aa18.28■□□□□ 0.52
EBF3-203ENST00000440978 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
EBF3-203ENST00000440978 DAPK1P53355 1430 aa18.28■□□□□ 0.52
EBF3-203ENST00000440978 C9orf84Q5VXU9 1444 aa18.28■□□□□ 0.52
EBF3-203ENST00000440978 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
EBF3-203ENST00000440978 ABCC5O15440 1437 aa18.27■□□□□ 0.52
EBF3-203ENST00000440978 ADGBQ8N7X0 1667 aa18.24■□□□□ 0.51
EBF3-203ENST00000440978 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
EBF3-203ENST00000440978 A2MP01023 1474 aa18.21■□□□□ 0.51
EBF3-203ENST00000440978 AGLP35573 1532 aa18.21■□□□□ 0.51
EBF3-203ENST00000440978 ARID4BQ4LE39 1312 aaPredicted RBP18.19■□□□□ 0.5
EBF3-203ENST00000440978 ADGRL2O95490 1459 aa18.18■□□□□ 0.5
EBF3-203ENST00000440978 SIGLEC1Q9BZZ2 1709 aa18.18■□□□□ 0.5
EBF3-203ENST00000440978 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
EBF3-203ENST00000440978 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
EBF3-203ENST00000440978 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
EBF3-203ENST00000440978 DUOX2Q9NRD8 1548 aa18.15■□□□□ 0.5
EBF3-203ENST00000440978 NCOA1Q15788 1441 aa18.15■□□□□ 0.5
EBF3-203ENST00000440978 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
EBF3-203ENST00000440978 KIF15Q9NS87 1388 aa18.14■□□□□ 0.49
EBF3-203ENST00000440978 PTPRKQ15262 1439 aa18.14■□□□□ 0.49
EBF3-203ENST00000440978 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
EBF3-203ENST00000440978 EIF2AK4Q9P2K8 1649 aaKnown RBP18.12■□□□□ 0.49
EBF3-203ENST00000440978 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
EBF3-203ENST00000440978 ADAMTSL3P82987 1691 aa18.11■□□□□ 0.49
EBF3-203ENST00000440978 ITGAEP38570 1179 aa18.1■□□□□ 0.49
EBF3-203ENST00000440978 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms