RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
PLOD3-205ENST00000440925 TSPOAP1O95153 1857 aa22.97■■□□□ 1.27
PLOD3-205ENST00000440925 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
PLOD3-205ENST00000440925 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
PLOD3-205ENST00000440925 FGD6Q6ZV73 1430 aa22.96■■□□□ 1.27
PLOD3-205ENST00000440925 MIA2Q96PC5 1412 aa22.96■■□□□ 1.27
PLOD3-205ENST00000440925 ARHGEF12Q9NZN5 1544 aa22.96■■□□□ 1.27
PLOD3-205ENST00000440925 FANCAO15360 1455 aa22.95■■□□□ 1.26
PLOD3-205ENST00000440925 AKNAQ7Z591 1439 aa22.95■■□□□ 1.26
PLOD3-205ENST00000440925 COL17A1Q9UMD9 1497 aaPredicted RBP22.95■■□□□ 1.26
PLOD3-205ENST00000440925 HNRNPMP52272 730 aaKnown RBP eCLIP22.94■■□□□ 1.26
PLOD3-205ENST00000440925 ARHGAP5Q13017 1502 aa22.93■■□□□ 1.26
PLOD3-205ENST00000440925 SAMD9LQ8IVG5 1584 aa22.92■■□□□ 1.26
PLOD3-205ENST00000440925 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
PLOD3-205ENST00000440925 TCOF1Q13428 1488 aaKnown RBP22.9■■□□□ 1.26
PLOD3-205ENST00000440925 NEO1Q92859 1461 aa22.9■■□□□ 1.26
PLOD3-205ENST00000440925 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
PLOD3-205ENST00000440925 AFAP1Q8N556 730 aa22.87■■□□□ 1.25
PLOD3-205ENST00000440925 SCAPERQ9BY12 1400 aa22.87■■□□□ 1.25
PLOD3-205ENST00000440925 ITSN2Q9NZM3 1697 aa22.87■■□□□ 1.25
PLOD3-205ENST00000440925 PTPN23Q9H3S7 1636 aa22.86■■□□□ 1.25
PLOD3-205ENST00000440925 CAMSAP2Q08AD1 1489 aa22.86■■□□□ 1.25
PLOD3-205ENST00000440925 TRAPPC8Q9Y2L5 1435 aa22.86■■□□□ 1.25
PLOD3-205ENST00000440925 RAPGEF3O95398 923 aa22.86■■□□□ 1.25
PLOD3-205ENST00000440925 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
PLOD3-205ENST00000440925 KIAA1107Q9UPP5 1409 aa22.85■■□□□ 1.25
PLOD3-205ENST00000440925 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
PLOD3-205ENST00000440925 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
PLOD3-205ENST00000440925 ADGRL1O94910 1474 aa22.82■■□□□ 1.24
PLOD3-205ENST00000440925 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
PLOD3-205ENST00000440925 ABCC1P33527 1531 aa22.82■■□□□ 1.24
PLOD3-205ENST00000440925 ABCC5O15440 1437 aa22.8■■□□□ 1.24
PLOD3-205ENST00000440925 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
PLOD3-205ENST00000440925 DENND4BO75064 1496 aaPredicted RBP22.76■■□□□ 1.23
PLOD3-205ENST00000440925 PLEKHH2Q8IVE3 1493 aa22.76■■□□□ 1.23
PLOD3-205ENST00000440925 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
PLOD3-205ENST00000440925 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
PLOD3-205ENST00000440925 RSPH4AQ5TD94 716 aa22.74■■□□□ 1.23
PLOD3-205ENST00000440925 FRMPD1Q5SYB0 1578 aa22.74■■□□□ 1.23
PLOD3-205ENST00000440925 DAPK1P53355 1430 aa22.73■■□□□ 1.23
PLOD3-205ENST00000440925 ARHGEF5Q12774 1597 aa22.72■■□□□ 1.23
PLOD3-205ENST00000440925 ITGAEP38570 1179 aa22.72■■□□□ 1.23
PLOD3-205ENST00000440925 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
PLOD3-205ENST00000440925 RICTORQ6R327 1708 aa22.7■■□□□ 1.22
PLOD3-205ENST00000440925 TRIM26Q12899 539 aaPredicted RBP22.69■■□□□ 1.22
PLOD3-205ENST00000440925 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
PLOD3-205ENST00000440925 CCDC141Q6ZP82 1450 aa22.68■■□□□ 1.22
PLOD3-205ENST00000440925 KDM5CP41229 1560 aa22.67■■□□□ 1.22
PLOD3-205ENST00000440925 ZNF518AQ6AHZ1 1483 aa22.66■■□□□ 1.22
PLOD3-205ENST00000440925 SPAG9O60271 1321 aaKnown RBP22.66■■□□□ 1.22
PLOD3-205ENST00000440925 TSPY4P0CV99 314 aa22.66■■□□□ 1.22
PLOD3-205ENST00000440925 TSPY10P0CW01 314 aa22.66■■□□□ 1.22
PLOD3-205ENST00000440925 MLH3Q9UHC1 1453 aa22.64■■□□□ 1.21
PLOD3-205ENST00000440925 KDM6BO15054 1643 aa22.64■■□□□ 1.21
PLOD3-205ENST00000440925 YEATS2Q9ULM3 1422 aa22.63■■□□□ 1.21
PLOD3-205ENST00000440925 RTEL1-TNFRSF6BF6WH68 1400 aa22.62■■□□□ 1.21
PLOD3-205ENST00000440925 C9orf84Q5VXU9 1444 aa22.62■■□□□ 1.21
PLOD3-205ENST00000440925 NCOA1Q15788 1441 aa22.61■■□□□ 1.21
PLOD3-205ENST00000440925 KIDINS220Q9ULH0 1771 aa22.61■■□□□ 1.21
PLOD3-205ENST00000440925 ZMYM4Q5VZL5 1548 aa22.6■■□□□ 1.21
PLOD3-205ENST00000440925 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
PLOD3-205ENST00000440925 RRP7BPQ9NSQ0 103 aa22.59■■□□□ 1.21
PLOD3-205ENST00000440925 SHANK2Q9UPX8 1470 aa22.59■■□□□ 1.21
PLOD3-205ENST00000440925 ADGRL2O95490 1459 aa22.57■■□□□ 1.2
PLOD3-205ENST00000440925 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
PLOD3-205ENST00000440925 CROCC2H7BZ55 1655 aa22.57■■□□□ 1.2
PLOD3-205ENST00000440925 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
PLOD3-205ENST00000440925 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
PLOD3-205ENST00000440925 ROCK1Q13464 1354 aa22.55■■□□□ 1.2
PLOD3-205ENST00000440925 ATP7AQ04656 1500 aa22.55■■□□□ 1.2
PLOD3-205ENST00000440925 HECW2Q9P2P5 1572 aa22.53■■□□□ 1.2
PLOD3-205ENST00000440925 MYT1LQ9UL68 1186 aa22.52■■□□□ 1.2
PLOD3-205ENST00000440925 ABCA6Q8N139 1617 aa22.51■■□□□ 1.19
PLOD3-205ENST00000440925 PCGF6Q9BYE7 350 aa22.51■■□□□ 1.19
PLOD3-205ENST00000440925 ANKRD30AQ9BXX3 1397 aa22.5■■□□□ 1.19
PLOD3-205ENST00000440925 DIP2CQ9Y2E4 1556 aa22.5■■□□□ 1.19
PLOD3-205ENST00000440925 NAIPQ13075 1403 aa22.5■■□□□ 1.19
PLOD3-205ENST00000440925 ATP10AO60312 1499 aa22.5■■□□□ 1.19
PLOD3-205ENST00000440925 DHX29Q7Z478 1369 aaKnown RBP22.5■■□□□ 1.19
PLOD3-205ENST00000440925 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
PLOD3-205ENST00000440925 SIGLEC1Q9BZZ2 1709 aa22.48■■□□□ 1.19
PLOD3-205ENST00000440925 PLXNC1O60486 1568 aa22.46■■□□□ 1.19
PLOD3-205ENST00000440925 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
PLOD3-205ENST00000440925 A2MP01023 1474 aa22.45■■□□□ 1.18
PLOD3-205ENST00000440925 ADGBQ8N7X0 1667 aa22.44■■□□□ 1.18
PLOD3-205ENST00000440925 ARHGEF40Q8TER5 1519 aa22.42■■□□□ 1.18
PLOD3-205ENST00000440925 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
PLOD3-205ENST00000440925 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
PLOD3-205ENST00000440925 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
PLOD3-205ENST00000440925 KIF3BO15066 747 aa22.38■■□□□ 1.17
PLOD3-205ENST00000440925 REREQ9P2R6 1566 aa22.38■■□□□ 1.17
PLOD3-205ENST00000440925 AGLP35573 1532 aa22.35■■□□□ 1.17
PLOD3-205ENST00000440925 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
PLOD3-205ENST00000440925 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
PLOD3-205ENST00000440925 HRCP23327 699 aa22.32■■□□□ 1.16
PLOD3-205ENST00000440925 GCC2Q8IWJ2 1684 aa22.32■■□□□ 1.16
PLOD3-205ENST00000440925 GGT6Q6P531 493 aa22.3■■□□□ 1.16
PLOD3-205ENST00000440925 MLECQ14165 292 aa22.29■■□□□ 1.16
PLOD3-205ENST00000440925 MROH1Q8NDA8 1641 aa22.28■■□□□ 1.16
PLOD3-205ENST00000440925 BCORL1Q5H9F3 1711 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms