RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 NUP160Q12769 1436 aa8.04□□□□□ -1.12
CCDC140-202ENST00000440903 POTEJP0CG39 1038 aa8.04□□□□□ -1.12
CCDC140-202ENST00000440903 IQGAP2Q13576 1575 aa8.03□□□□□ -1.12
CCDC140-202ENST00000440903 CEP170Q5SW79 1584 aa8.03□□□□□ -1.12
CCDC140-202ENST00000440903 UBTFP17480 764 aaKnown RBP8.03□□□□□ -1.12
CCDC140-202ENST00000440903 ATN1P54259 1190 aaPredicted RBP8.02□□□□□ -1.13
CCDC140-202ENST00000440903 KIAA0586Q9BVV6 1533 aa8.02□□□□□ -1.13
CCDC140-202ENST00000440903 CLASP1Q7Z460 1538 aa8□□□□□ -1.13
CCDC140-202ENST00000440903 CARMIL2Q6F5E8 1435 aa7.99□□□□□ -1.13
CCDC140-202ENST00000440903 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
CCDC140-202ENST00000440903 TNIKQ9UKE5 1360 aa7.98□□□□□ -1.13
CCDC140-202ENST00000440903 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
CCDC140-202ENST00000440903 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
CCDC140-202ENST00000440903 KIF12Q96FN5 646 aa7.96□□□□□ -1.14
CCDC140-202ENST00000440903 UGGT2Q9NYU1 1516 aa7.96□□□□□ -1.14
CCDC140-202ENST00000440903 SHROOM2Q13796 1616 aa7.96□□□□□ -1.14
CCDC140-202ENST00000440903 SEC24BO95487 1268 aa7.95□□□□□ -1.14
CCDC140-202ENST00000440903 DNAJC5Q9H3Z4 198 aa7.95□□□□□ -1.14
CCDC140-202ENST00000440903 BMP2KQ9NSY1 1161 aaPredicted RBP7.95□□□□□ -1.14
CCDC140-202ENST00000440903 KIAA0556O60303 1618 aa7.94□□□□□ -1.14
CCDC140-202ENST00000440903 PLEKHG5O94827 1062 aa7.94□□□□□ -1.14
CCDC140-202ENST00000440903 CLIP1P30622 1438 aa7.94□□□□□ -1.14
CCDC140-202ENST00000440903 CEP162Q5TB80 1403 aa7.94□□□□□ -1.14
CCDC140-202ENST00000440903 PRG4Q92954 1404 aaPredicted RBP7.94□□□□□ -1.14
CCDC140-202ENST00000440903 JPH4Q96JJ6 628 aa7.93□□□□□ -1.14
CCDC140-202ENST00000440903 SAMD9Q5K651 1589 aa7.93□□□□□ -1.14
CCDC140-202ENST00000440903 TIE1P35590 1138 aa7.92□□□□□ -1.14
CCDC140-202ENST00000440903 RANGAP1P46060 587 aaPredicted RBP7.92□□□□□ -1.14
CCDC140-202ENST00000440903 TRPC6Q9Y210 931 aa7.92□□□□□ -1.14
CCDC140-202ENST00000440903 POTEFA5A3E0 1075 aa7.91□□□□□ -1.14
CCDC140-202ENST00000440903 MAP3K13O43283 966 aa7.91□□□□□ -1.14
CCDC140-202ENST00000440903 ARHGEF11O15085 1522 aa7.91□□□□□ -1.14
CCDC140-202ENST00000440903 FMN1Q68DA7 1419 aa7.9□□□□□ -1.14
CCDC140-202ENST00000440903 DISP1Q96F81 1524 aa7.89□□□□□ -1.15
CCDC140-202ENST00000440903 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
CCDC140-202ENST00000440903 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
CCDC140-202ENST00000440903 ARHGAP35Q9NRY4 1499 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 FHOD3Q2V2M9 1422 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 MIER1Q8N108 512 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 RIMBP3CA6NJZ7 1639 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 RIMBP3BA6NNM3 1639 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 RIMBP3Q9UFD9 1639 aa7.88□□□□□ -1.15
CCDC140-202ENST00000440903 PTPRGP23470 1445 aa7.87□□□□□ -1.15
CCDC140-202ENST00000440903 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
CCDC140-202ENST00000440903 HECW1Q76N89 1606 aa7.86□□□□□ -1.15
CCDC140-202ENST00000440903 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
CCDC140-202ENST00000440903 TTLL13PA6NNM8 815 aa7.86□□□□□ -1.15
CCDC140-202ENST00000440903 P3H3Q8IVL6 736 aa7.85□□□□□ -1.15
CCDC140-202ENST00000440903 ERCC6L2Q5T890 1561 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 ARAP1Q96P48 1450 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 FYCO1Q9BQS8 1478 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 RASEFQ8IZ41 740 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 TRIM35Q9UPQ4 493 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 RAPGEF6Q8TEU7 1601 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 VPS8Q8N3P4 1428 aa7.84□□□□□ -1.15
CCDC140-202ENST00000440903 ABCC2Q92887 1545 aa7.83□□□□□ -1.16
CCDC140-202ENST00000440903 CCDC18Q5T9S5 1454 aa7.83□□□□□ -1.16
CCDC140-202ENST00000440903 SLAIN1Q8ND83 568 aa7.83□□□□□ -1.16
CCDC140-202ENST00000440903 UACAQ9BZF9 1416 aa7.83□□□□□ -1.16
CCDC140-202ENST00000440903 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
CCDC140-202ENST00000440903 IER5LQ5T953 404 aa7.82□□□□□ -1.16
CCDC140-202ENST00000440903 PROM2Q8N271 834 aa7.82□□□□□ -1.16
CCDC140-202ENST00000440903 UHRF1BP1LA0JNW5 1464 aa7.81□□□□□ -1.16
CCDC140-202ENST00000440903 ABCA8O94911 1581 aa7.81□□□□□ -1.16
CCDC140-202ENST00000440903 CASKIN1Q8WXD9 1431 aa7.81□□□□□ -1.16
CCDC140-202ENST00000440903 ATP1B4Q9UN42 357 aaPredicted RBP7.81□□□□□ -1.16
CCDC140-202ENST00000440903 PCDHB13Q9Y5F0 798 aa7.81□□□□□ -1.16
CCDC140-202ENST00000440903 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
CCDC140-202ENST00000440903 PLCD3Q8N3E9 789 aa7.79□□□□□ -1.16
CCDC140-202ENST00000440903 ST18O60284 1047 aa7.78□□□□□ -1.16
CCDC140-202ENST00000440903 PLCG2P16885 1265 aa7.78□□□□□ -1.16
CCDC140-202ENST00000440903 CYB5RLQ6IPT4 315 aa7.78□□□□□ -1.16
CCDC140-202ENST00000440903 SGIP1Q9BQI5 828 aa7.78□□□□□ -1.16
CCDC140-202ENST00000440903 CDK11AQ9UQ88 783 aaPredicted RBP7.78□□□□□ -1.16
CCDC140-202ENST00000440903 ADCY10Q96PN6 1610 aa7.78□□□□□ -1.16
CCDC140-202ENST00000440903 CFAP43Q8NDM7 1665 aa7.77□□□□□ -1.17
CCDC140-202ENST00000440903 NUP153P49790 1475 aaKnown RBP7.77□□□□□ -1.17
CCDC140-202ENST00000440903 EPRSP07814 1512 aaKnown RBP7.77□□□□□ -1.17
CCDC140-202ENST00000440903 ZCCHC11Q5TAX3 1644 aaKnown RBP7.76□□□□□ -1.17
CCDC140-202ENST00000440903 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
CCDC140-202ENST00000440903 EHBP1L1Q8N3D4 1523 aa7.75□□□□□ -1.17
CCDC140-202ENST00000440903 TMEM106CQ9BVX2 250 aa7.75□□□□□ -1.17
CCDC140-202ENST00000440903 TIAM1Q13009 1591 aa7.75□□□□□ -1.17
CCDC140-202ENST00000440903 MTUS2Q5JR59 1369 aa7.74□□□□□ -1.17
CCDC140-202ENST00000440903 MAPKBP1O60336 1514 aa7.74□□□□□ -1.17
CCDC140-202ENST00000440903 MAP3K1Q13233 1512 aa7.74□□□□□ -1.17
CCDC140-202ENST00000440903 CDK13Q14004 1512 aaKnown RBP7.74□□□□□ -1.17
CCDC140-202ENST00000440903 ZBTB47Q9UFB7 747 aaPredicted RBP7.74□□□□□ -1.17
CCDC140-202ENST00000440903 ARID3CA6NKF2 412 aa7.73□□□□□ -1.17
CCDC140-202ENST00000440903 KIF14Q15058 1648 aa7.73□□□□□ -1.17
CCDC140-202ENST00000440903 WDR7Q9Y4E6 1490 aa7.73□□□□□ -1.17
CCDC140-202ENST00000440903 PLEKHD1A6NEE1 506 aa7.72□□□□□ -1.17
CCDC140-202ENST00000440903 IFNL1Q8IU54 200 aa7.72□□□□□ -1.17
CCDC140-202ENST00000440903 TROQ12816 1431 aaPredicted RBP7.71□□□□□ -1.17
CCDC140-202ENST00000440903 ASXL2Q76L83 1435 aa7.71□□□□□ -1.17
CCDC140-202ENST00000440903 ATP10BO94823 1461 aa7.71□□□□□ -1.18
CCDC140-202ENST00000440903 FAM212AQ96EL1 285 aa7.71□□□□□ -1.18
CCDC140-202ENST00000440903 MMRN1Q13201 1228 aa7.7□□□□□ -1.18
CCDC140-202ENST00000440903 SUPT6HQ7KZ85 1726 aaKnown RBP7.69□□□□□ -1.18
CCDC140-202ENST00000440903 LRRC9Q6ZRR7 1453 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms