RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 PREX2Q70Z35 1606 aa31.78■■■□□ 2.68
TSSC4-206ENST00000440813 CDC42BPAQ5VT25 1732 aa31.77■■■□□ 2.68
TSSC4-206ENST00000440813 LRRC9Q6ZRR7 1453 aa31.77■■■□□ 2.68
TSSC4-206ENST00000440813 KANK4Q5T7N3 995 aaPredicted RBP31.76■■■□□ 2.67
TSSC4-206ENST00000440813 CCNB3Q8WWL7 1395 aa31.76■■■□□ 2.67
TSSC4-206ENST00000440813 ADGRL1O94910 1474 aa31.76■■■□□ 2.67
TSSC4-206ENST00000440813 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
TSSC4-206ENST00000440813 DENND4BO75064 1496 aaPredicted RBP31.74■■■□□ 2.67
TSSC4-206ENST00000440813 SCAPERQ9BY12 1400 aa31.73■■■□□ 2.67
TSSC4-206ENST00000440813 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
TSSC4-206ENST00000440813 ZNF777Q9ULD5 760 aaPredicted RBP31.7■■■□□ 2.67
TSSC4-206ENST00000440813 NCOA2Q15596 1464 aa31.7■■■□□ 2.66
TSSC4-206ENST00000440813 FRMPD1Q5SYB0 1578 aa31.68■■■□□ 2.66
TSSC4-206ENST00000440813 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
TSSC4-206ENST00000440813 RICTORQ6R327 1708 aa31.66■■■□□ 2.66
TSSC4-206ENST00000440813 POGZQ7Z3K3 1410 aa31.62■■■□□ 2.65
TSSC4-206ENST00000440813 ITSN2Q9NZM3 1697 aa31.6■■■□□ 2.65
TSSC4-206ENST00000440813 SAMD9LQ8IVG5 1584 aa31.59■■■□□ 2.65
TSSC4-206ENST00000440813 ABCC1P33527 1531 aa31.59■■■□□ 2.65
TSSC4-206ENST00000440813 ARHGEF12Q9NZN5 1544 aa31.56■■■□□ 2.64
TSSC4-206ENST00000440813 AFAP1Q8N556 730 aa31.56■■■□□ 2.64
TSSC4-206ENST00000440813 ZNF518AQ6AHZ1 1483 aa31.53■■■□□ 2.64
TSSC4-206ENST00000440813 ZNF644Q9H582 1327 aaPredicted RBP31.53■■■□□ 2.64
TSSC4-206ENST00000440813 HNRNPMP52272 730 aaKnown RBP eCLIP31.53■■■□□ 2.64
TSSC4-206ENST00000440813 ZMYM4Q5VZL5 1548 aa31.53■■■□□ 2.64
TSSC4-206ENST00000440813 TRAPPC8Q9Y2L5 1435 aa31.52■■■□□ 2.64
TSSC4-206ENST00000440813 SYCP2Q9BX26 1530 aa31.5■■■□□ 2.63
TSSC4-206ENST00000440813 PLEKHH2Q8IVE3 1493 aa31.5■■■□□ 2.63
TSSC4-206ENST00000440813 MYT1LQ9UL68 1186 aa31.49■■■□□ 2.63
TSSC4-206ENST00000440813 YEATS2Q9ULM3 1422 aa31.47■■■□□ 2.63
TSSC4-206ENST00000440813 KIAA1107Q9UPP5 1409 aa31.47■■■□□ 2.63
TSSC4-206ENST00000440813 MAGI2Q86UL8 1455 aa31.46■■■□□ 2.63
TSSC4-206ENST00000440813 ZFYVE16Q7Z3T8 1539 aa31.46■■■□□ 2.63
TSSC4-206ENST00000440813 KDM5CP41229 1560 aa31.46■■■□□ 2.63
TSSC4-206ENST00000440813 ARHGEF40Q8TER5 1519 aa31.45■■■□□ 2.63
TSSC4-206ENST00000440813 MYOM3Q5VTT5 1437 aa31.44■■■□□ 2.62
TSSC4-206ENST00000440813 CAMSAP2Q08AD1 1489 aa31.42■■■□□ 2.62
TSSC4-206ENST00000440813 HECW2Q9P2P5 1572 aa31.39■■■□□ 2.62
TSSC4-206ENST00000440813 KDM4FA0A1W2PPD8 638 aa31.38■■■□□ 2.61
TSSC4-206ENST00000440813 PPARGC1BQ86YN6 1023 aaKnown RBP31.38■■■□□ 2.61
TSSC4-206ENST00000440813 MLH3Q9UHC1 1453 aa31.37■■■□□ 2.61
TSSC4-206ENST00000440813 MBD5Q9P267 1494 aa31.36■■■□□ 2.61
TSSC4-206ENST00000440813 MIA2Q96PC5 1412 aa31.36■■■□□ 2.61
TSSC4-206ENST00000440813 SPAG9O60271 1321 aaKnown RBP31.36■■■□□ 2.61
TSSC4-206ENST00000440813 ARID4BQ4LE39 1312 aaPredicted RBP31.36■■■□□ 2.61
TSSC4-206ENST00000440813 ATP10AO60312 1499 aa31.33■■■□□ 2.61
TSSC4-206ENST00000440813 KIDINS220Q9ULH0 1771 aa31.3■■■□□ 2.6
TSSC4-206ENST00000440813 DIP2CQ9Y2E4 1556 aa31.29■■■□□ 2.6
TSSC4-206ENST00000440813 ABCA6Q8N139 1617 aa31.28■■■□□ 2.6
TSSC4-206ENST00000440813 C9orf84Q5VXU9 1444 aa31.28■■■□□ 2.6
TSSC4-206ENST00000440813 CCDC141Q6ZP82 1450 aa31.27■■■□□ 2.6
TSSC4-206ENST00000440813 FGD6Q6ZV73 1430 aa31.27■■■□□ 2.6
TSSC4-206ENST00000440813 RSPH4AQ5TD94 716 aa31.27■■■□□ 2.6
TSSC4-206ENST00000440813 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
TSSC4-206ENST00000440813 ATP7AQ04656 1500 aa31.25■■■□□ 2.59
TSSC4-206ENST00000440813 PTPN23Q9H3S7 1636 aa31.25■■■□□ 2.59
TSSC4-206ENST00000440813 SIGLEC1Q9BZZ2 1709 aa31.25■■■□□ 2.59
TSSC4-206ENST00000440813 ARHGEF5Q12774 1597 aa31.23■■■□□ 2.59
TSSC4-206ENST00000440813 INO80Q9ULG1 1556 aaPredicted RBP31.23■■■□□ 2.59
TSSC4-206ENST00000440813 TSPY4P0CV99 314 aa31.2■■■□□ 2.59
TSSC4-206ENST00000440813 TSPY10P0CW01 314 aa31.2■■■□□ 2.59
TSSC4-206ENST00000440813 MLECQ14165 292 aa31.19■■■□□ 2.58
TSSC4-206ENST00000440813 BCORL1Q5H9F3 1711 aa31.18■■■□□ 2.58
TSSC4-206ENST00000440813 RTEL1-TNFRSF6BF6WH68 1400 aa31.17■■■□□ 2.58
TSSC4-206ENST00000440813 TCOF1Q13428 1488 aaKnown RBP31.17■■■□□ 2.58
TSSC4-206ENST00000440813 REREQ9P2R6 1566 aa31.15■■■□□ 2.58
TSSC4-206ENST00000440813 FAM50AQ14320 339 aaKnown RBP31.15■■■□□ 2.58
TSSC4-206ENST00000440813 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
TSSC4-206ENST00000440813 A2MP01023 1474 aa31.1■■■□□ 2.57
TSSC4-206ENST00000440813 ABCC5O15440 1437 aa31.09■■■□□ 2.57
TSSC4-206ENST00000440813 AGLP35573 1532 aa31.08■■■□□ 2.57
TSSC4-206ENST00000440813 ADGBQ8N7X0 1667 aa31.07■■■□□ 2.56
TSSC4-206ENST00000440813 MADDQ8WXG6 1647 aa31.07■■■□□ 2.56
TSSC4-206ENST00000440813 MAST1Q9Y2H9 1570 aa31.06■■■□□ 2.56
TSSC4-206ENST00000440813 DAPK1P53355 1430 aa31.06■■■□□ 2.56
TSSC4-206ENST00000440813 DNMT1P26358 1616 aaKnown RBP31.06■■■□□ 2.56
TSSC4-206ENST00000440813 PLXNC1O60486 1568 aa31.02■■■□□ 2.56
TSSC4-206ENST00000440813 CROCC2H7BZ55 1655 aa31.02■■■□□ 2.56
TSSC4-206ENST00000440813 DHX29Q7Z478 1369 aaKnown RBP31.02■■■□□ 2.56
TSSC4-206ENST00000440813 CHIC2Q9UKJ5 165 aa31■■■□□ 2.55
TSSC4-206ENST00000440813 SHANK2Q9UPX8 1470 aa31■■■□□ 2.55
TSSC4-206ENST00000440813 RIMS1Q86UR5 1692 aaKnown RBP31■■■□□ 2.55
TSSC4-206ENST00000440813 FER1L4A9Z1Z3 1794 aa30.97■■■□□ 2.55
TSSC4-206ENST00000440813 PTPRMP28827 1452 aa30.97■■■□□ 2.55
TSSC4-206ENST00000440813 GGT6Q6P531 493 aa30.94■■■□□ 2.54
TSSC4-206ENST00000440813 PLPPR3Q6T4P5 718 aa30.94■■■□□ 2.54
TSSC4-206ENST00000440813 RRP7BPQ9NSQ0 103 aa30.94■■■□□ 2.54
TSSC4-206ENST00000440813 KIF3BO15066 747 aa30.92■■■□□ 2.54
TSSC4-206ENST00000440813 ESF1Q9H501 851 aaKnown RBP30.92■■■□□ 2.54
TSSC4-206ENST00000440813 ITGAEP38570 1179 aa30.9■■■□□ 2.54
TSSC4-206ENST00000440813 KIF15Q9NS87 1388 aa30.9■■■□□ 2.54
TSSC4-206ENST00000440813 ANKRD30AQ9BXX3 1397 aa30.89■■■□□ 2.54
TSSC4-206ENST00000440813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.87■■■□□ 2.53
TSSC4-206ENST00000440813 RRBP1Q9P2E9 1410 aaKnown RBP30.87■■■□□ 2.53
TSSC4-206ENST00000440813 DUOX2Q9NRD8 1548 aa30.86■■■□□ 2.53
TSSC4-206ENST00000440813 PTPRKQ15262 1439 aa30.85■■■□□ 2.53
TSSC4-206ENST00000440813 NCOA1Q15788 1441 aa30.84■■■□□ 2.53
TSSC4-206ENST00000440813 CEBPAP49715 358 aaPredicted RBP30.83■■■□□ 2.53
TSSC4-206ENST00000440813 ADGRL2O95490 1459 aa30.82■■■□□ 2.52
TSSC4-206ENST00000440813 CNTLNQ9NXG0 1405 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms