RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 DNMT1P26358 1616 aaKnown RBP28.56■■■□□ 2.16
SNX17-203ENST00000440760 MYO5CQ9NQX4 1742 aa28.56■■■□□ 2.16
SNX17-203ENST00000440760 RAB3GAP2Q9H2M9 1393 aa28.54■■■□□ 2.16
SNX17-203ENST00000440760 ASXL2Q76L83 1435 aa28.53■■■□□ 2.16
SNX17-203ENST00000440760 DAPK1P53355 1430 aa28.52■■■□□ 2.16
SNX17-203ENST00000440760 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
SNX17-203ENST00000440760 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
SNX17-203ENST00000440760 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
SNX17-203ENST00000440760 ABCC5O15440 1437 aa28.49■■■□□ 2.15
SNX17-203ENST00000440760 SAMD9LQ8IVG5 1584 aa28.49■■■□□ 2.15
SNX17-203ENST00000440760 ARHGAP5Q13017 1502 aa28.49■■■□□ 2.15
SNX17-203ENST00000440760 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
SNX17-203ENST00000440760 NPM1P06748 294 aaKnown RBP eCLIP28.46■■■□□ 2.15
SNX17-203ENST00000440760 HFM1A2PYH4 1435 aa28.46■■■□□ 2.15
SNX17-203ENST00000440760 GCC2Q8IWJ2 1684 aa28.43■■■□□ 2.14
SNX17-203ENST00000440760 NAIPQ13075 1403 aa28.42■■■□□ 2.14
SNX17-203ENST00000440760 ABCA9Q8IUA7 1624 aa28.41■■■□□ 2.14
SNX17-203ENST00000440760 DHX57Q6P158 1386 aaKnown RBP28.41■■■□□ 2.14
SNX17-203ENST00000440760 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
SNX17-203ENST00000440760 PLCH2O75038 1416 aa28.38■■■□□ 2.13
SNX17-203ENST00000440760 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
SNX17-203ENST00000440760 ADGBQ8N7X0 1667 aa28.37■■■□□ 2.13
SNX17-203ENST00000440760 ZEB1P37275 1124 aaPredicted RBP28.37■■■□□ 2.13
SNX17-203ENST00000440760 AKNAQ7Z591 1439 aa28.36■■■□□ 2.13
SNX17-203ENST00000440760 ARHGEF5Q12774 1597 aa28.35■■■□□ 2.13
SNX17-203ENST00000440760 KDM6BO15054 1643 aa28.35■■■□□ 2.13
SNX17-203ENST00000440760 MBD5Q9P267 1494 aa28.34■■■□□ 2.13
SNX17-203ENST00000440760 HNRNPMP52272 730 aaKnown RBP eCLIP28.34■■■□□ 2.13
SNX17-203ENST00000440760 ROCK1Q13464 1354 aa28.31■■■□□ 2.12
SNX17-203ENST00000440760 MAPKBP1O60336 1514 aa28.3■■■□□ 2.12
SNX17-203ENST00000440760 ARAP3Q8WWN8 1544 aa28.29■■■□□ 2.12
SNX17-203ENST00000440760 CCDC141Q6ZP82 1450 aa28.29■■■□□ 2.12
SNX17-203ENST00000440760 SHANK2Q9UPX8 1470 aa28.29■■■□□ 2.12
SNX17-203ENST00000440760 ABCC1P33527 1531 aa28.28■■■□□ 2.12
SNX17-203ENST00000440760 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
SNX17-203ENST00000440760 C9orf84Q5VXU9 1444 aa28.27■■■□□ 2.12
SNX17-203ENST00000440760 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
SNX17-203ENST00000440760 EFCAB2Q5VUJ9 269 aa28.25■■■□□ 2.11
SNX17-203ENST00000440760 PLEKHH2Q8IVE3 1493 aa28.25■■■□□ 2.11
SNX17-203ENST00000440760 NCOA1Q15788 1441 aa28.24■■■□□ 2.11
SNX17-203ENST00000440760 FANCAO15360 1455 aa28.23■■■□□ 2.11
SNX17-203ENST00000440760 KIAA1107Q9UPP5 1409 aa28.22■■■□□ 2.11
SNX17-203ENST00000440760 ANKRD30AQ9BXX3 1397 aa28.19■■■□□ 2.1
SNX17-203ENST00000440760 TSPY4P0CV99 314 aa28.17■■■□□ 2.1
SNX17-203ENST00000440760 TSPY10P0CW01 314 aa28.17■■■□□ 2.1
SNX17-203ENST00000440760 CD109Q6YHK3 1445 aa28.16■■■□□ 2.1
SNX17-203ENST00000440760 TRAPPC8Q9Y2L5 1435 aa28.15■■■□□ 2.1
SNX17-203ENST00000440760 MAST1Q9Y2H9 1570 aa28.15■■■□□ 2.1
SNX17-203ENST00000440760 ADGRL1O94910 1474 aa28.12■■■□□ 2.09
SNX17-203ENST00000440760 CLSPNQ9HAW4 1339 aa28.12■■■□□ 2.09
SNX17-203ENST00000440760 RSPH4AQ5TD94 716 aa28.11■■■□□ 2.09
SNX17-203ENST00000440760 DIP2BQ9P265 1576 aa28.11■■■□□ 2.09
SNX17-203ENST00000440760 MAP3K4Q9Y6R4 1608 aa28.1■■■□□ 2.09
SNX17-203ENST00000440760 KIF15Q9NS87 1388 aa28.1■■■□□ 2.09
SNX17-203ENST00000440760 CFAP74Q9C0B2 1584 aa28.08■■■□□ 2.09
SNX17-203ENST00000440760 TRIM52Q96A61 297 aa28.08■■■□□ 2.09
SNX17-203ENST00000440760 ANKRD50Q9ULJ7 1429 aa28.07■■■□□ 2.08
SNX17-203ENST00000440760 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
SNX17-203ENST00000440760 GLI2P10070 1586 aa28.06■■■□□ 2.08
SNX17-203ENST00000440760 SCAPERQ9BY12 1400 aa28.05■■■□□ 2.08
SNX17-203ENST00000440760 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
SNX17-203ENST00000440760 ZFYVE16Q7Z3T8 1539 aa28.03■■■□□ 2.08
SNX17-203ENST00000440760 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
SNX17-203ENST00000440760 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
SNX17-203ENST00000440760 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
SNX17-203ENST00000440760 TSPOAP1O95153 1857 aa27.97■■■□□ 2.07
SNX17-203ENST00000440760 SPAG9O60271 1321 aaKnown RBP27.97■■■□□ 2.07
SNX17-203ENST00000440760 ATP7AQ04656 1500 aa27.95■■■□□ 2.07
SNX17-203ENST00000440760 KIF13AQ9H1H9 1805 aa27.94■■■□□ 2.06
SNX17-203ENST00000440760 PZPP20742 1482 aa27.94■■■□□ 2.06
SNX17-203ENST00000440760 NEO1Q92859 1461 aa27.94■■■□□ 2.06
SNX17-203ENST00000440760 SIN3AQ96ST3 1273 aa27.93■■■□□ 2.06
SNX17-203ENST00000440760 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
SNX17-203ENST00000440760 DUOX2Q9NRD8 1548 aa27.93■■■□□ 2.06
SNX17-203ENST00000440760 PPRC1Q5VV67 1664 aaKnown RBP27.92■■■□□ 2.06
SNX17-203ENST00000440760 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
SNX17-203ENST00000440760 RTEL1-TNFRSF6BF6WH68 1400 aa27.92■■■□□ 2.06
SNX17-203ENST00000440760 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
SNX17-203ENST00000440760 KIDINS220Q9ULH0 1771 aa27.88■■■□□ 2.05
SNX17-203ENST00000440760 KDM5CP41229 1560 aa27.88■■■□□ 2.05
SNX17-203ENST00000440760 NEUROD1Q13562 356 aa27.88■■■□□ 2.05
SNX17-203ENST00000440760 FOXD1Q16676 465 aa27.88■■■□□ 2.05
SNX17-203ENST00000440760 SLC4A1APQ9BWU0 796 aaKnown RBP27.86■■■□□ 2.05
SNX17-203ENST00000440760 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
SNX17-203ENST00000440760 UNC13BO14795 1591 aa27.85■■■□□ 2.05
SNX17-203ENST00000440760 ERBINQ96RT1 1412 aa27.85■■■□□ 2.05
SNX17-203ENST00000440760 MYT1LQ9UL68 1186 aa27.85■■■□□ 2.05
SNX17-203ENST00000440760 ACIN1Q9UKV3 1341 aaKnown RBP27.85■■■□□ 2.05
SNX17-203ENST00000440760 NUP155O75694 1391 aa27.84■■■□□ 2.05
SNX17-203ENST00000440760 HECW2Q9P2P5 1572 aa27.83■■■□□ 2.05
SNX17-203ENST00000440760 RICTORQ6R327 1708 aa27.83■■■□□ 2.05
SNX17-203ENST00000440760 RAPGEF3O95398 923 aa27.8■■■□□ 2.04
SNX17-203ENST00000440760 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
SNX17-203ENST00000440760 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
SNX17-203ENST00000440760 ABCA6Q8N139 1617 aa27.76■■■□□ 2.03
SNX17-203ENST00000440760 TEX14Q8IWB6 1497 aa27.76■■■□□ 2.03
SNX17-203ENST00000440760 MLH3Q9UHC1 1453 aa27.76■■■□□ 2.03
SNX17-203ENST00000440760 MAGI2Q86UL8 1455 aa27.75■■■□□ 2.03
SNX17-203ENST00000440760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.75■■■□□ 2.032e-6■□□□□ 10.1
SNX17-203ENST00000440760 IQGAP3Q86VI3 1631 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms