RNA–Protein interactions for RNA: ENST00000440480.6

CDKN1C-204, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-204ENST00000440480 TTC37Q6PGP7 1564 aa31.98■■■□□ 2.71
CDKN1C-204ENST00000440480 PLCH2O75038 1416 aa31.95■■■□□ 2.7
CDKN1C-204ENST00000440480 CDC42BPAQ5VT25 1732 aa31.94■■■□□ 2.7
CDKN1C-204ENST00000440480 EFCAB2Q5VUJ9 269 aa31.91■■■□□ 2.7
CDKN1C-204ENST00000440480 CAMSAP2Q08AD1 1489 aa31.9■■■□□ 2.7
CDKN1C-204ENST00000440480 ARHGAP5Q13017 1502 aa31.89■■■□□ 2.7
CDKN1C-204ENST00000440480 PREX2Q70Z35 1606 aa31.88■■■□□ 2.69
CDKN1C-204ENST00000440480 ABCA9Q8IUA7 1624 aa31.85■■■□□ 2.69
CDKN1C-204ENST00000440480 PTPRKQ15262 1439 aa31.85■■■□□ 2.69
CDKN1C-204ENST00000440480 MYO5CQ9NQX4 1742 aa31.84■■■□□ 2.69
CDKN1C-204ENST00000440480 CDC42BPBQ9Y5S2 1711 aa31.84■■■□□ 2.69
CDKN1C-204ENST00000440480 HNRNPMP52272 730 aaKnown RBP eCLIP31.82■■■□□ 2.68
CDKN1C-204ENST00000440480 CHIC2Q9UKJ5 165 aa31.82■■■□□ 2.68
CDKN1C-204ENST00000440480 CD109Q6YHK3 1445 aa31.8■■■□□ 2.68
CDKN1C-204ENST00000440480 ABCC5O15440 1437 aa31.8■■■□□ 2.68
CDKN1C-204ENST00000440480 DAPK1P53355 1430 aa31.8■■■□□ 2.68
CDKN1C-204ENST00000440480 RSPH4AQ5TD94 716 aa31.79■■■□□ 2.68
CDKN1C-204ENST00000440480 ARAP3Q8WWN8 1544 aa31.79■■■□□ 2.68
CDKN1C-204ENST00000440480 FAM69CQ0P6D2 419 aa31.77■■■□□ 2.68
CDKN1C-204ENST00000440480 DIP2BQ9P265 1576 aa31.77■■■□□ 2.68
CDKN1C-204ENST00000440480 SAMD9LQ8IVG5 1584 aa31.75■■■□□ 2.67
CDKN1C-204ENST00000440480 PLEKHH2Q8IVE3 1493 aa31.75■■■□□ 2.67
CDKN1C-204ENST00000440480 TSPY4P0CV99 314 aa31.75■■■□□ 2.67
CDKN1C-204ENST00000440480 TSPY10P0CW01 314 aa31.75■■■□□ 2.67
CDKN1C-204ENST00000440480 KIAA1107Q9UPP5 1409 aa31.74■■■□□ 2.67
CDKN1C-204ENST00000440480 DNMT1P26358 1616 aaKnown RBP31.73■■■□□ 2.67
CDKN1C-204ENST00000440480 FANCAO15360 1455 aa31.73■■■□□ 2.67
CDKN1C-204ENST00000440480 SETD5Q9C0A6 1442 aa31.72■■■□□ 2.67
CDKN1C-204ENST00000440480 MBD5Q9P267 1494 aa31.72■■■□□ 2.67
CDKN1C-204ENST00000440480 GLI2P10070 1586 aa31.7■■■□□ 2.67
CDKN1C-204ENST00000440480 RRP7BPQ9NSQ0 103 aa31.7■■■□□ 2.66
CDKN1C-204ENST00000440480 KIF13AQ9H1H9 1805 aa31.68■■■□□ 2.66
CDKN1C-204ENST00000440480 AKNAQ7Z591 1439 aa31.67■■■□□ 2.66
CDKN1C-204ENST00000440480 HFM1A2PYH4 1435 aa31.66■■■□□ 2.66
CDKN1C-204ENST00000440480 ROCK1Q13464 1354 aa31.65■■■□□ 2.66
CDKN1C-204ENST00000440480 RAB3GAP2Q9H2M9 1393 aa31.65■■■□□ 2.66
CDKN1C-204ENST00000440480 SYCP2Q9BX26 1530 aa31.65■■■□□ 2.66
CDKN1C-204ENST00000440480 ARHGEF5Q12774 1597 aa31.64■■■□□ 2.66
CDKN1C-204ENST00000440480 CCDC141Q6ZP82 1450 aa31.64■■■□□ 2.66
CDKN1C-204ENST00000440480 TRHP20396 242 aaPredicted RBP31.63■■■□□ 2.65
CDKN1C-204ENST00000440480 MAP3K4Q9Y6R4 1608 aa31.63■■■□□ 2.65
CDKN1C-204ENST00000440480 ARHGEF12Q9NZN5 1544 aa31.62■■■□□ 2.65
CDKN1C-204ENST00000440480 NAIPQ13075 1403 aa31.61■■■□□ 2.65
CDKN1C-204ENST00000440480 C9orf84Q5VXU9 1444 aa31.6■■■□□ 2.65
CDKN1C-204ENST00000440480 ABCC1P33527 1531 aa31.59■■■□□ 2.65
CDKN1C-204ENST00000440480 ANKRD30AQ9BXX3 1397 aa31.59■■■□□ 2.65
CDKN1C-204ENST00000440480 SHANK2Q9UPX8 1470 aa31.58■■■□□ 2.65
CDKN1C-204ENST00000440480 NCOA1Q15788 1441 aa31.58■■■□□ 2.65
CDKN1C-204ENST00000440480 SCAPERQ9BY12 1400 aa31.58■■■□□ 2.65
CDKN1C-204ENST00000440480 ADGRL1O94910 1474 aa31.58■■■□□ 2.65
CDKN1C-204ENST00000440480 AFAP1Q8N556 730 aa31.56■■■□□ 2.64
CDKN1C-204ENST00000440480 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
CDKN1C-204ENST00000440480 TRAPPC8Q9Y2L5 1435 aa31.55■■■□□ 2.64
CDKN1C-204ENST00000440480 ADGRL2O95490 1459 aa31.54■■■□□ 2.64
CDKN1C-204ENST00000440480 NEO1Q92859 1461 aa31.53■■■□□ 2.64
CDKN1C-204ENST00000440480 CROCC2H7BZ55 1655 aa31.51■■■□□ 2.64
CDKN1C-204ENST00000440480 CFAP74Q9C0B2 1584 aa31.51■■■□□ 2.63
CDKN1C-204ENST00000440480 CLSPNQ9HAW4 1339 aa31.5■■■□□ 2.63
CDKN1C-204ENST00000440480 SPAG9O60271 1321 aaKnown RBP31.49■■■□□ 2.63
CDKN1C-204ENST00000440480 PPRC1Q5VV67 1664 aaKnown RBP31.47■■■□□ 2.63
CDKN1C-204ENST00000440480 KIF15Q9NS87 1388 aa31.43■■■□□ 2.62
CDKN1C-204ENST00000440480 MYT1LQ9UL68 1186 aa31.43■■■□□ 2.62
CDKN1C-204ENST00000440480 ADGBQ8N7X0 1667 aa31.43■■■□□ 2.62
CDKN1C-204ENST00000440480 TEX14Q8IWB6 1497 aa31.42■■■□□ 2.62
CDKN1C-204ENST00000440480 MAST1Q9Y2H9 1570 aa31.42■■■□□ 2.62
CDKN1C-204ENST00000440480 ACIN1Q9UKV3 1341 aaKnown RBP31.42■■■□□ 2.62
CDKN1C-204ENST00000440480 RTEL1-TNFRSF6BF6WH68 1400 aa31.4■■■□□ 2.62
CDKN1C-204ENST00000440480 ZNF518AQ6AHZ1 1483 aa31.4■■■□□ 2.62
CDKN1C-204ENST00000440480 GCC2Q8IWJ2 1684 aa31.4■■■□□ 2.62
CDKN1C-204ENST00000440480 DHX57Q6P158 1386 aaKnown RBP31.39■■■□□ 2.62
CDKN1C-204ENST00000440480 ANKRD50Q9ULJ7 1429 aa31.39■■■□□ 2.61
CDKN1C-204ENST00000440480 RAPGEF3O95398 923 aa31.38■■■□□ 2.61
CDKN1C-204ENST00000440480 TRIM52Q96A61 297 aa31.38■■■□□ 2.61
CDKN1C-204ENST00000440480 DENND4BO75064 1496 aaPredicted RBP31.37■■■□□ 2.61
CDKN1C-204ENST00000440480 POGZQ7Z3K3 1410 aa31.37■■■□□ 2.61
CDKN1C-204ENST00000440480 KDM6BO15054 1643 aa31.32■■■□□ 2.6
CDKN1C-204ENST00000440480 PLXNC1O60486 1568 aa31.29■■■□□ 2.6
CDKN1C-204ENST00000440480 ZFYVE16Q7Z3T8 1539 aa31.28■■■□□ 2.6
CDKN1C-204ENST00000440480 ATP7AQ04656 1500 aa31.27■■■□□ 2.6
CDKN1C-204ENST00000440480 DUOX2Q9NRD8 1548 aa31.25■■■□□ 2.59
CDKN1C-204ENST00000440480 MLH3Q9UHC1 1453 aa31.25■■■□□ 2.59
CDKN1C-204ENST00000440480 KDM5CP41229 1560 aa31.24■■■□□ 2.59
CDKN1C-204ENST00000440480 INO80Q9ULG1 1556 aaPredicted RBP31.22■■■□□ 2.59
CDKN1C-204ENST00000440480 MPHOSPH9Q99550 1183 aa31.2■■■□□ 2.59
CDKN1C-204ENST00000440480 ERBINQ96RT1 1412 aa31.19■■■□□ 2.58
CDKN1C-204ENST00000440480 DHX29Q7Z478 1369 aaKnown RBP31.17■■■□□ 2.58
CDKN1C-204ENST00000440480 COL17A1Q9UMD9 1497 aaPredicted RBP31.16■■■□□ 2.58
CDKN1C-204ENST00000440480 NUP155O75694 1391 aa31.16■■■□□ 2.58
CDKN1C-204ENST00000440480 SLC4A1APQ9BWU0 796 aaKnown RBP31.16■■■□□ 2.58
CDKN1C-204ENST00000440480 KIDINS220Q9ULH0 1771 aa31.15■■■□□ 2.58
CDKN1C-204ENST00000440480 HECW2Q9P2P5 1572 aa31.15■■■□□ 2.58
CDKN1C-204ENST00000440480 RICTORQ6R327 1708 aa31.14■■■□□ 2.58
CDKN1C-204ENST00000440480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.11■■■□□ 2.57
CDKN1C-204ENST00000440480 FRMPD1Q5SYB0 1578 aa31.1■■■□□ 2.57
CDKN1C-204ENST00000440480 A2MP01023 1474 aa31.08■■■□□ 2.57
CDKN1C-204ENST00000440480 KIF3BO15066 747 aa31.08■■■□□ 2.57
CDKN1C-204ENST00000440480 ZNF316A6NFI3 1004 aaPredicted RBP31.08■■■□□ 2.57
CDKN1C-204ENST00000440480 MAGI2Q86UL8 1455 aa31.06■■■□□ 2.56
CDKN1C-204ENST00000440480 ZMYM4Q5VZL5 1548 aa31.04■■■□□ 2.56
CDKN1C-204ENST00000440480 YEATS2Q9ULM3 1422 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms