RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 MIA2Q96PC5 1412 aa6.47□□□□□ -1.37
SCN3A-204ENST00000440431 UACAQ9BZF9 1416 aa6.47□□□□□ -1.37
SCN3A-204ENST00000440431 SAMD9LQ8IVG5 1584 aa6.46□□□□□ -1.37
SCN3A-204ENST00000440431 NAIPQ13075 1403 aa6.46□□□□□ -1.38
SCN3A-204ENST00000440431 ITSN2Q9NZM3 1697 aa6.46□□□□□ -1.38
SCN3A-204ENST00000440431 NEFLP07196 543 aa6.46□□□□□ -1.38
SCN3A-204ENST00000440431 PTPRGP23470 1445 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 MBD5Q9P267 1494 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 HFM1A2PYH4 1435 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 ABCC5O15440 1437 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 MTUS2Q5JR59 1369 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 RAB3GAP2Q9H2M9 1393 aa6.45□□□□□ -1.38
SCN3A-204ENST00000440431 ZNF644Q9H582 1327 aaPredicted RBP6.44□□□□□ -1.38
SCN3A-204ENST00000440431 ARHGEF12Q9NZN5 1544 aa6.44□□□□□ -1.38
SCN3A-204ENST00000440431 CAMSAP2Q08AD1 1489 aa6.43□□□□□ -1.38
SCN3A-204ENST00000440431 ADGBQ8N7X0 1667 aa6.43□□□□□ -1.38
SCN3A-204ENST00000440431 AKNAQ7Z591 1439 aa6.43□□□□□ -1.38
SCN3A-204ENST00000440431 DAPK1P53355 1430 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 ADGRL2O95490 1459 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 ARID3CA6NKF2 412 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 SETD5Q9C0A6 1442 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 SCAF1Q9H7N4 1312 aaKnown RBP6.42□□□□□ -1.38
SCN3A-204ENST00000440431 ARHGEF5Q12774 1597 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 MYO5CQ9NQX4 1742 aa6.42□□□□□ -1.38
SCN3A-204ENST00000440431 ABCA9Q8IUA7 1624 aa6.41□□□□□ -1.38
SCN3A-204ENST00000440431 TSPY4P0CV99 314 aa6.41□□□□□ -1.38
SCN3A-204ENST00000440431 TSPY10P0CW01 314 aa6.41□□□□□ -1.38
SCN3A-204ENST00000440431 PLEKHD1A6NEE1 506 aa6.4□□□□□ -1.38
SCN3A-204ENST00000440431 MAST1Q9Y2H9 1570 aa6.4□□□□□ -1.39
SCN3A-204ENST00000440431 RIMBP3CA6NJZ7 1639 aa6.4□□□□□ -1.39
SCN3A-204ENST00000440431 RIMBP3BA6NNM3 1639 aa6.4□□□□□ -1.39
SCN3A-204ENST00000440431 RIMBP3Q9UFD9 1639 aa6.4□□□□□ -1.39
SCN3A-204ENST00000440431 ZNF777Q9ULD5 760 aaPredicted RBP6.39□□□□□ -1.39
SCN3A-204ENST00000440431 ROCK1Q13464 1354 aa6.39□□□□□ -1.39
SCN3A-204ENST00000440431 POLR3GLQ9BT43 218 aa6.39□□□□□ -1.39
SCN3A-204ENST00000440431 NCOA1Q15788 1441 aa6.38□□□□□ -1.39
SCN3A-204ENST00000440431 ARAP3Q8WWN8 1544 aa6.38□□□□□ -1.39
SCN3A-204ENST00000440431 SHANK2Q9UPX8 1470 aa6.38□□□□□ -1.39
SCN3A-204ENST00000440431 ABCC1P33527 1531 aa6.38□□□□□ -1.39
SCN3A-204ENST00000440431 PZPP20742 1482 aa6.37□□□□□ -1.39
SCN3A-204ENST00000440431 PPRC1Q5VV67 1664 aaKnown RBP6.37□□□□□ -1.39
SCN3A-204ENST00000440431 SYCP2Q9BX26 1530 aa6.36□□□□□ -1.39
SCN3A-204ENST00000440431 SLC4A1APQ9BWU0 796 aaKnown RBP6.36□□□□□ -1.39
SCN3A-204ENST00000440431 PLXNC1O60486 1568 aa6.36□□□□□ -1.39
SCN3A-204ENST00000440431 KDM5DQ9BY66 1539 aa6.36□□□□□ -1.39
SCN3A-204ENST00000440431 WDR7Q9Y4E6 1490 aa6.36□□□□□ -1.39
SCN3A-204ENST00000440431 PLCH2O75038 1416 aa6.36□□□□□ -1.39
SCN3A-204ENST00000440431 MAP3K4Q9Y6R4 1608 aa6.35□□□□□ -1.39
SCN3A-204ENST00000440431 CLSPNQ9HAW4 1339 aa6.35□□□□□ -1.39
SCN3A-204ENST00000440431 STAG3Q9UJ98 1225 aa6.35□□□□□ -1.39
SCN3A-204ENST00000440431 INO80Q9ULG1 1556 aaPredicted RBP6.35□□□□□ -1.39
SCN3A-204ENST00000440431 OSCARQ8IYS5 282 aa6.35□□□□□ -1.39
SCN3A-204ENST00000440431 BCANQ96GW7 911 aa6.35□□□□□ -1.39
SCN3A-204ENST00000440431 UNC13BO14795 1591 aa6.34□□□□□ -1.39
SCN3A-204ENST00000440431 MAGI2Q86UL8 1455 aa6.34□□□□□ -1.39
SCN3A-204ENST00000440431 ASXL2Q76L83 1435 aa6.34□□□□□ -1.39
SCN3A-204ENST00000440431 KIAA1107Q9UPP5 1409 aa6.34□□□□□ -1.4
SCN3A-204ENST00000440431 DEPDC5O75140 1603 aa6.33□□□□□ -1.4
SCN3A-204ENST00000440431 MROH1Q8NDA8 1641 aa6.33□□□□□ -1.4
SCN3A-204ENST00000440431 KIDINS220Q9ULH0 1771 aa6.33□□□□□ -1.4
SCN3A-204ENST00000440431 ZFYVE16Q7Z3T8 1539 aa6.33□□□□□ -1.4
SCN3A-204ENST00000440431 TRAPPC8Q9Y2L5 1435 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 NEFMP07197 916 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 SIGLEC1Q9BZZ2 1709 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 FRMPD1Q5SYB0 1578 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 C9orf84Q5VXU9 1444 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 KIF13AQ9H1H9 1805 aa6.32□□□□□ -1.4
SCN3A-204ENST00000440431 KDM5CP41229 1560 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 VWDEQ8N2E2 1590 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 NEUROD1Q13562 356 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 CCDC141Q6ZP82 1450 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 GLI2P10070 1586 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 RICTORQ6R327 1708 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 BCORL1Q5H9F3 1711 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 ARHGAP5Q13017 1502 aa6.31□□□□□ -1.4
SCN3A-204ENST00000440431 IQGAP3Q86VI3 1631 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 RRP7BPQ9NSQ0 103 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 SIN3AQ96ST3 1273 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 CFDP1Q9UEE9 299 aaPredicted RBP6.3□□□□□ -1.4
SCN3A-204ENST00000440431 DIP2BQ9P265 1576 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 TEX14Q8IWB6 1497 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 ANKRD30BQ9BXX2 1392 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 CHIC2Q9UKJ5 165 aa6.3□□□□□ -1.4
SCN3A-204ENST00000440431 PLA2R1Q13018 1463 aa6.29□□□□□ -1.4
SCN3A-204ENST00000440431 HNRNPMP52272 730 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCN3A-204ENST00000440431 ERICH6Q7L0X2 663 aa6.28□□□□□ -1.4
SCN3A-204ENST00000440431 ZNF326Q5BKZ1 582 aaKnown RBP6.28□□□□□ -1.4
SCN3A-204ENST00000440431 TONSLQ96HA7 1378 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 E9PCH4 1651 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 ANP32CO43423 234 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 FANCAO15360 1455 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 ABCA6Q8N139 1617 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 PHF23Q9BUL5 403 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-204ENST00000440431 RPRD2Q5VT52 1461 aaKnown RBP6.27□□□□□ -1.41
SCN3A-204ENST00000440431 ANKRD50Q9ULJ7 1429 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 CHGAP10645 457 aaKnown RBP6.27□□□□□ -1.41
SCN3A-204ENST00000440431 KCNH8Q96L42 1107 aa6.27□□□□□ -1.41
SCN3A-204ENST00000440431 FAM135AQ9P2D6 1515 aa6.26□□□□□ -1.41
SCN3A-204ENST00000440431 PLEKHH2Q8IVE3 1493 aa6.26□□□□□ -1.41
SCN3A-204ENST00000440431 RTEL1-TNFRSF6BF6WH68 1400 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms