RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
APP-209ENST00000440126 UACAQ9BZF9 1416 aa11.27□□□□□ -0.6
APP-209ENST00000440126 KIF14Q15058 1648 aa11.27□□□□□ -0.61
APP-209ENST00000440126 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
APP-209ENST00000440126 NUP160Q12769 1436 aa11.26□□□□□ -0.61
APP-209ENST00000440126 CARMIL2Q6F5E8 1435 aa11.26□□□□□ -0.61
APP-209ENST00000440126 MPHOSPH9Q99550 1183 aa11.25□□□□□ -0.61
APP-209ENST00000440126 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
APP-209ENST00000440126 ABCC5O15440 1437 aa11.24□□□□□ -0.61
APP-209ENST00000440126 DAPK1P53355 1430 aa11.24□□□□□ -0.61
APP-209ENST00000440126 TCOF1Q13428 1488 aaKnown RBP11.24□□□□□ -0.61
APP-209ENST00000440126 EIF5BO60841 1220 aaKnown RBP11.23□□□□□ -0.61
APP-209ENST00000440126 TROQ12816 1431 aaPredicted RBP11.23□□□□□ -0.61
APP-209ENST00000440126 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
APP-209ENST00000440126 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
APP-209ENST00000440126 HNRNPMP52272 730 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■□□□□ 8.3
APP-209ENST00000440126 CHD1O14646 1710 aa11.22□□□□□ -0.61
APP-209ENST00000440126 MIA2Q96PC5 1412 aa11.21□□□□□ -0.61
APP-209ENST00000440126 PTPRGP23470 1445 aa11.21□□□□□ -0.61
APP-209ENST00000440126 ERCC6L2Q5T890 1561 aa11.21□□□□□ -0.62
APP-209ENST00000440126 ATP10BO94823 1461 aa11.2□□□□□ -0.62
APP-209ENST00000440126 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
APP-209ENST00000440126 CAMSAP2Q08AD1 1489 aa11.2□□□□□ -0.62
APP-209ENST00000440126 GPATCH8Q9UKJ3 1502 aaKnown RBP11.2□□□□□ -0.62
APP-209ENST00000440126 CNGB1Q14028 1251 aaPredicted RBP11.2□□□□□ -0.62
APP-209ENST00000440126 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
APP-209ENST00000440126 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
APP-209ENST00000440126 DNMT1P26358 1616 aaKnown RBP11.16□□□□□ -0.62
APP-209ENST00000440126 ABCA8O94911 1581 aa11.15□□□□□ -0.62
APP-209ENST00000440126 HSPA5P11021 654 aaKnown RBP11.14□□□□□ -0.63
APP-209ENST00000440126 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
APP-209ENST00000440126 PKD2Q13563 968 aa11.13□□□□□ -0.63
APP-209ENST00000440126 AKNAQ7Z591 1439 aa11.13□□□□□ -0.63
APP-209ENST00000440126 KDM5BQ9UGL1 1544 aa11.13□□□□□ -0.63
APP-209ENST00000440126 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
APP-209ENST00000440126 TIMELESSQ9UNS1 1208 aa11.13□□□□□ -0.63
APP-209ENST00000440126 NCOA1Q15788 1441 aa11.12□□□□□ -0.63
APP-209ENST00000440126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.632e-7■■□□□ 12.3
APP-209ENST00000440126 CDC42BPAQ5VT25 1732 aa11.12□□□□□ -0.63
APP-209ENST00000440126 TSPY4P0CV99 314 aa11.11□□□□□ -0.63
APP-209ENST00000440126 TSPY10P0CW01 314 aa11.11□□□□□ -0.63
APP-209ENST00000440126 ANKRD30BQ9BXX2 1392 aa11.1□□□□□ -0.63
APP-209ENST00000440126 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
APP-209ENST00000440126 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
APP-209ENST00000440126 DAXXQ9UER7 740 aaPredicted RBP11.1□□□□□ -0.63
APP-209ENST00000440126 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
APP-209ENST00000440126 ABCC10Q5T3U5 1492 aa11.1□□□□□ -0.63
APP-209ENST00000440126 ROCK1Q13464 1354 aa11.09□□□□□ -0.63
APP-209ENST00000440126 ITSN2Q9NZM3 1697 aa11.09□□□□□ -0.63
APP-209ENST00000440126 NUP155O75694 1391 aa11.09□□□□□ -0.63
APP-209ENST00000440126 ANKRD30AQ9BXX3 1397 aa11.09□□□□□ -0.63
APP-209ENST00000440126 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.63
APP-209ENST00000440126 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.63
APP-209ENST00000440126 PZPP20742 1482 aa11.08□□□□□ -0.64
APP-209ENST00000440126 ANP32CO43423 234 aa11.08□□□□□ -0.64
APP-209ENST00000440126 WASHC2AQ641Q2 1341 aa11.07□□□□□ -0.64
APP-209ENST00000440126 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
APP-209ENST00000440126 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
APP-209ENST00000440126 KIF15Q9NS87 1388 aa11.06□□□□□ -0.64
APP-209ENST00000440126 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
APP-209ENST00000440126 TTC37Q6PGP7 1564 aa11.05□□□□□ -0.64
APP-209ENST00000440126 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
APP-209ENST00000440126 RGL3Q3MIN7 710 aa11.04□□□□□ -0.64
APP-209ENST00000440126 CDC42BPBQ9Y5S2 1711 aa11.03□□□□□ -0.64
APP-209ENST00000440126 BCANQ96GW7 911 aa11.03□□□□□ -0.64
APP-209ENST00000440126 SAMD9LQ8IVG5 1584 aa11.03□□□□□ -0.64
APP-209ENST00000440126 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
APP-209ENST00000440126 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
APP-209ENST00000440126 CROCC2H7BZ55 1655 aa11.03□□□□□ -0.64
APP-209ENST00000440126 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.64
APP-209ENST00000440126 CCDC184Q52MB2 194 aa11.02□□□□□ -0.65
APP-209ENST00000440126 MYT1LQ9UL68 1186 aa11.02□□□□□ -0.65
APP-209ENST00000440126 TEX14Q8IWB6 1497 aa11.02□□□□□ -0.65
APP-209ENST00000440126 MBD5Q9P267 1494 aa11.01□□□□□ -0.65
APP-209ENST00000440126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.01□□□□□ -0.65
APP-209ENST00000440126 KIAA1107Q9UPP5 1409 aa11□□□□□ -0.65
APP-209ENST00000440126 AFAP1Q8N556 730 aa11□□□□□ -0.65
APP-209ENST00000440126 DCAF11Q8TEB1 546 aa11□□□□□ -0.65
APP-209ENST00000440126 SHROOM2Q13796 1616 aa11□□□□□ -0.65
APP-209ENST00000440126 ADGRL2O95490 1459 aa10.99□□□□□ -0.65
APP-209ENST00000440126 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
APP-209ENST00000440126 SALL2Q9Y467 1007 aaPredicted RBP10.98□□□□□ -0.65
APP-209ENST00000440126 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
APP-209ENST00000440126 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
APP-209ENST00000440126 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
APP-209ENST00000440126 KIF7Q2M1P5 1343 aa10.97□□□□□ -0.65
APP-209ENST00000440126 ZCCHC11Q5TAX3 1644 aaKnown RBP10.96□□□□□ -0.65
APP-209ENST00000440126 PLEKHH2Q8IVE3 1493 aa10.96□□□□□ -0.66
APP-209ENST00000440126 SUPT16HQ9Y5B9 1047 aaKnown RBP10.95□□□□□ -0.66
APP-209ENST00000440126 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
APP-209ENST00000440126 CLASP1Q7Z460 1538 aa10.95□□□□□ -0.66
APP-209ENST00000440126 FAM9BQ8IZU0 186 aa10.95□□□□□ -0.66
APP-209ENST00000440126 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
APP-209ENST00000440126 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
APP-209ENST00000440126 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
APP-209ENST00000440126 UBE2Q2Q8WVN8 375 aa10.94□□□□□ -0.66
APP-209ENST00000440126 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
APP-209ENST00000440126 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
APP-209ENST00000440126 USP47Q96K76 1375 aa10.94□□□□□ -0.66
APP-209ENST00000440126 SHANK2Q9UPX8 1470 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms