RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 DAPK1P53355 1430 aa20.3■□□□□ 0.84
LIMD1-202ENST00000440097 GPATCH8Q9UKJ3 1502 aaKnown RBP20.27■□□□□ 0.84
LIMD1-202ENST00000440097 ABCC5O15440 1437 aa20.26■□□□□ 0.83
LIMD1-202ENST00000440097 CAMSAP2Q08AD1 1489 aa20.25■□□□□ 0.83
LIMD1-202ENST00000440097 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
LIMD1-202ENST00000440097 TONSLQ96HA7 1378 aa20.24■□□□□ 0.83
LIMD1-202ENST00000440097 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
LIMD1-202ENST00000440097 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
LIMD1-202ENST00000440097 GCC2Q8IWJ2 1684 aa20.23■□□□□ 0.83
LIMD1-202ENST00000440097 DNMT1P26358 1616 aaKnown RBP20.22■□□□□ 0.83
LIMD1-202ENST00000440097 ADCY10Q96PN6 1610 aa20.22■□□□□ 0.83
LIMD1-202ENST00000440097 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
LIMD1-202ENST00000440097 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
LIMD1-202ENST00000440097 KDM6BO15054 1643 aa20.2■□□□□ 0.82
LIMD1-202ENST00000440097 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
LIMD1-202ENST00000440097 MPHOSPH9Q99550 1183 aa20.18■□□□□ 0.82
LIMD1-202ENST00000440097 FOXD1Q16676 465 aa20.16■□□□□ 0.82
LIMD1-202ENST00000440097 KCNH8Q96L42 1107 aa20.16■□□□□ 0.82
LIMD1-202ENST00000440097 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
LIMD1-202ENST00000440097 ABCC10Q5T3U5 1492 aa20.14■□□□□ 0.81
LIMD1-202ENST00000440097 CDC42BPAQ5VT25 1732 aa20.13■□□□□ 0.81
LIMD1-202ENST00000440097 TSPY4P0CV99 314 aa20.13■□□□□ 0.81
LIMD1-202ENST00000440097 TSPY10P0CW01 314 aa20.13■□□□□ 0.81
LIMD1-202ENST00000440097 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
LIMD1-202ENST00000440097 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
LIMD1-202ENST00000440097 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
LIMD1-202ENST00000440097 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
LIMD1-202ENST00000440097 ABCC2Q92887 1545 aa20.11■□□□□ 0.81
LIMD1-202ENST00000440097 NCOA1Q15788 1441 aa20.1■□□□□ 0.81
LIMD1-202ENST00000440097 SUPT16HQ9Y5B9 1047 aaKnown RBP20.1■□□□□ 0.81
LIMD1-202ENST00000440097 HIRIP3Q9BW71 556 aaPredicted RBP20.1■□□□□ 0.81
LIMD1-202ENST00000440097 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
LIMD1-202ENST00000440097 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
LIMD1-202ENST00000440097 ADGBQ8N7X0 1667 aa20.04■□□□□ 0.8
LIMD1-202ENST00000440097 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
LIMD1-202ENST00000440097 ARHGAP5Q13017 1502 aa20.03■□□□□ 0.8
LIMD1-202ENST00000440097 CROCC2H7BZ55 1655 aa20.02■□□□□ 0.8
LIMD1-202ENST00000440097 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
LIMD1-202ENST00000440097 ADGRL2O95490 1459 aa20.01■□□□□ 0.79
LIMD1-202ENST00000440097 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
LIMD1-202ENST00000440097 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIMD1-202ENST00000440097 PREX2Q70Z35 1606 aa19.99■□□□□ 0.79
LIMD1-202ENST00000440097 CDC42BPBQ9Y5S2 1711 aa19.98■□□□□ 0.79
LIMD1-202ENST00000440097 KIF15Q9NS87 1388 aa19.97■□□□□ 0.79
LIMD1-202ENST00000440097 DDX10Q13206 875 aaKnown RBP19.97■□□□□ 0.79
LIMD1-202ENST00000440097 SAMD9LQ8IVG5 1584 aa19.97■□□□□ 0.79
LIMD1-202ENST00000440097 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
LIMD1-202ENST00000440097 SHANK2Q9UPX8 1470 aa19.97■□□□□ 0.79
LIMD1-202ENST00000440097 TSHZ2Q9NRE2 1034 aa19.96■□□□□ 0.79
LIMD1-202ENST00000440097 L3MBTL2Q969R5 705 aa19.96■□□□□ 0.79
LIMD1-202ENST00000440097 CCDC141Q6ZP82 1450 aa19.96■□□□□ 0.79
LIMD1-202ENST00000440097 PKD2Q13563 968 aa19.95■□□□□ 0.78
LIMD1-202ENST00000440097 ANKRD30BQ9BXX2 1392 aa19.95■□□□□ 0.78
LIMD1-202ENST00000440097 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
LIMD1-202ENST00000440097 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
LIMD1-202ENST00000440097 NUP155O75694 1391 aa19.95■□□□□ 0.78
LIMD1-202ENST00000440097 UHRF1BP1LA0JNW5 1464 aa19.94■□□□□ 0.78
LIMD1-202ENST00000440097 SYCP2Q9BX26 1530 aa19.94■□□□□ 0.78
LIMD1-202ENST00000440097 KDM5BQ9UGL1 1544 aa19.93■□□□□ 0.78
LIMD1-202ENST00000440097 PZPP20742 1482 aa19.93■□□□□ 0.78
LIMD1-202ENST00000440097 ARHGEF5Q12774 1597 aa19.92■□□□□ 0.78
LIMD1-202ENST00000440097 MYO5CQ9NQX4 1742 aa19.91■□□□□ 0.78
LIMD1-202ENST00000440097 EFCAB2Q5VUJ9 269 aa19.91■□□□□ 0.78
LIMD1-202ENST00000440097 ANP32EQ9BTT0 268 aa19.9■□□□□ 0.78
LIMD1-202ENST00000440097 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
LIMD1-202ENST00000440097 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
LIMD1-202ENST00000440097 KIAA1107Q9UPP5 1409 aa19.87■□□□□ 0.77
LIMD1-202ENST00000440097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.773e-6■■■■□ 20.1
LIMD1-202ENST00000440097 PLCH2O75038 1416 aa19.86■□□□□ 0.77
LIMD1-202ENST00000440097 PLEKHH2Q8IVE3 1493 aa19.85■□□□□ 0.77
LIMD1-202ENST00000440097 ZNF326Q5BKZ1 582 aaKnown RBP19.85■□□□□ 0.77
LIMD1-202ENST00000440097 NPM1P06748 294 aaKnown RBP eCLIP19.84■□□□□ 0.77
LIMD1-202ENST00000440097 EIF4G2P78344 907 aaKnown RBP eCLIP19.82■□□□□ 0.76
LIMD1-202ENST00000440097 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
LIMD1-202ENST00000440097 MYT1LQ9UL68 1186 aa19.81■□□□□ 0.76
LIMD1-202ENST00000440097 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
LIMD1-202ENST00000440097 ARHGEF12Q9NZN5 1544 aa19.79■□□□□ 0.76
LIMD1-202ENST00000440097 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
LIMD1-202ENST00000440097 TEX14Q8IWB6 1497 aa19.78■□□□□ 0.76
LIMD1-202ENST00000440097 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
LIMD1-202ENST00000440097 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
LIMD1-202ENST00000440097 ASXL2Q76L83 1435 aa19.75■□□□□ 0.75
LIMD1-202ENST00000440097 TRAPPC8Q9Y2L5 1435 aa19.75■□□□□ 0.75
LIMD1-202ENST00000440097 ANP32CO43423 234 aa19.74■□□□□ 0.75
LIMD1-202ENST00000440097 MAST1Q9Y2H9 1570 aa19.73■□□□□ 0.75
LIMD1-202ENST00000440097 ABCC1P33527 1531 aa19.73■□□□□ 0.75
LIMD1-202ENST00000440097 KDM2AQ9Y2K7 1162 aa19.72■□□□□ 0.75
LIMD1-202ENST00000440097 FAM135AQ9P2D6 1515 aa19.72■□□□□ 0.75
LIMD1-202ENST00000440097 FANCAO15360 1455 aa19.72■□□□□ 0.75
LIMD1-202ENST00000440097 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
LIMD1-202ENST00000440097 BCL11AQ9H165 835 aa19.71■□□□□ 0.75
LIMD1-202ENST00000440097 BCANQ96GW7 911 aa19.7■□□□□ 0.74
LIMD1-202ENST00000440097 DUOX2Q9NRD8 1548 aa19.69■□□□□ 0.74
LIMD1-202ENST00000440097 PLXNC1O60486 1568 aa19.69■□□□□ 0.74
LIMD1-202ENST00000440097 WASHC2AQ641Q2 1341 aa19.67■□□□□ 0.74
LIMD1-202ENST00000440097 DCAF11Q8TEB1 546 aa19.67■□□□□ 0.74
LIMD1-202ENST00000440097 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
LIMD1-202ENST00000440097 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
LIMD1-202ENST00000440097 C11orf95C9JLR9 678 aaPredicted RBP19.65■□□□□ 0.74
LIMD1-202ENST00000440097 ERBINQ96RT1 1412 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms