RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
PCNX1-202ENST00000439984 KIAA2012Q0VF49 1180 aa18.7■□□□□ 0.58
PCNX1-202ENST00000439984 DRC7Q8IY82 874 aa18.7■□□□□ 0.58
PCNX1-202ENST00000439984 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
PCNX1-202ENST00000439984 KNSTRNQ9Y448 316 aa18.69■□□□□ 0.58
PCNX1-202ENST00000439984 FAM13BQ9NYF5 915 aa18.68■□□□□ 0.58
PCNX1-202ENST00000439984 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
PCNX1-202ENST00000439984 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
PCNX1-202ENST00000439984 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.58
PCNX1-202ENST00000439984 MFAP1P55081 439 aaKnown RBP18.63■□□□□ 0.57
PCNX1-202ENST00000439984 NFKBIBQ15653 356 aa18.6■□□□□ 0.57
PCNX1-202ENST00000439984 GOLGA6L6A8MZA4 724 aa18.6■□□□□ 0.57
PCNX1-202ENST00000439984 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
PCNX1-202ENST00000439984 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
PCNX1-202ENST00000439984 EXOC6Q8TAG9 804 aa18.59■□□□□ 0.57
PCNX1-202ENST00000439984 MSH5O43196 834 aa18.58■□□□□ 0.57
PCNX1-202ENST00000439984 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
PCNX1-202ENST00000439984 TAOK2Q9UL54 1235 aa18.58■□□□□ 0.56
PCNX1-202ENST00000439984 PTMSP20962 102 aa18.57■□□□□ 0.56
PCNX1-202ENST00000439984 ZNF771Q7L3S4 317 aaPredicted RBP18.55■□□□□ 0.56
PCNX1-202ENST00000439984 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
PCNX1-202ENST00000439984 PLIN1O60240 522 aa18.54■□□□□ 0.56
PCNX1-202ENST00000439984 RAB3GAP2Q9H2M9 1393 aa18.54■□□□□ 0.56
PCNX1-202ENST00000439984 CALD1Q05682 793 aaKnown RBP18.54■□□□□ 0.56
PCNX1-202ENST00000439984 GOLGA6L4A6NEF3 574 aa18.54■□□□□ 0.56
PCNX1-202ENST00000439984 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
PCNX1-202ENST00000439984 CADPSQ9ULU8 1353 aa18.52■□□□□ 0.56
PCNX1-202ENST00000439984 NRDCO43847 1150 aa18.52■□□□□ 0.55
PCNX1-202ENST00000439984 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
PCNX1-202ENST00000439984 FAM161AQ3B820 660 aa18.51■□□□□ 0.55
PCNX1-202ENST00000439984 CFAP53Q96M91 514 aa18.51■□□□□ 0.55
PCNX1-202ENST00000439984 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
PCNX1-202ENST00000439984 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-202ENST00000439984 CFDP1Q9UEE9 299 aaPredicted RBP18.5■□□□□ 0.55
PCNX1-202ENST00000439984 DDX11L8A8MPP1 907 aa18.49■□□□□ 0.55
PCNX1-202ENST00000439984 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
PCNX1-202ENST00000439984 ARHGAP35Q9NRY4 1499 aa18.48■□□□□ 0.55
PCNX1-202ENST00000439984 FOXD1Q16676 465 aa18.47■□□□□ 0.55
PCNX1-202ENST00000439984 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.55
PCNX1-202ENST00000439984 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.55
PCNX1-202ENST00000439984 UBE2Q2Q8WVN8 375 aa18.45■□□□□ 0.54
PCNX1-202ENST00000439984 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
PCNX1-202ENST00000439984 MS4A1P11836 297 aa18.45■□□□□ 0.54
PCNX1-202ENST00000439984 FHOD3Q2V2M9 1422 aa18.44■□□□□ 0.54
PCNX1-202ENST00000439984 APBB1O00213 710 aa18.44■□□□□ 0.54
PCNX1-202ENST00000439984 MAPK8IP3Q9UPT6 1336 aa18.44■□□□□ 0.54
PCNX1-202ENST00000439984 RRP1P56182 461 aaKnown RBP18.44■□□□□ 0.54
PCNX1-202ENST00000439984 DDX49Q9Y6V7 483 aaKnown RBP18.44■□□□□ 0.54
PCNX1-202ENST00000439984 CRBNQ96SW2 442 aa18.43■□□□□ 0.54
PCNX1-202ENST00000439984 DHX57Q6P158 1386 aaKnown RBP18.43■□□□□ 0.54
PCNX1-202ENST00000439984 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
PCNX1-202ENST00000439984 R3HCC1Q9Y3T6 440 aaKnown RBP18.42■□□□□ 0.54
PCNX1-202ENST00000439984 ZBED9Q6R2W3 1325 aa18.42■□□□□ 0.54
PCNX1-202ENST00000439984 SYAP1Q96A49 352 aaPredicted RBP18.42■□□□□ 0.54
PCNX1-202ENST00000439984 FRAT2O75474 233 aaPredicted RBP18.41■□□□□ 0.54
PCNX1-202ENST00000439984 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.4■□□□□ 0.54
PCNX1-202ENST00000439984 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
PCNX1-202ENST00000439984 CDCA8Q53HL2 280 aa18.39■□□□□ 0.53
PCNX1-202ENST00000439984 NAP1L2Q9ULW6 460 aaPredicted RBP18.39■□□□□ 0.53
PCNX1-202ENST00000439984 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
PCNX1-202ENST00000439984 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
PCNX1-202ENST00000439984 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
PCNX1-202ENST00000439984 CLUAP1Q96AJ1 413 aa18.39■□□□□ 0.53
PCNX1-202ENST00000439984 KCNJ4P48050 445 aa18.39■□□□□ 0.53
PCNX1-202ENST00000439984 STAG3Q9UJ98 1225 aa18.38■□□□□ 0.53
PCNX1-202ENST00000439984 ITPRIPQ8IWB1 547 aa18.38■□□□□ 0.53
PCNX1-202ENST00000439984 NOL8Q76FK4 1167 aaKnown RBP18.38■□□□□ 0.53
PCNX1-202ENST00000439984 PMFBP1Q8TBY8 1022 aa18.37■□□□□ 0.53
PCNX1-202ENST00000439984 DCAF11Q8TEB1 546 aa18.37■□□□□ 0.53
PCNX1-202ENST00000439984 MCCP23508 829 aa18.37■□□□□ 0.53
PCNX1-202ENST00000439984 FGD1P98174 961 aa18.37■□□□□ 0.53
PCNX1-202ENST00000439984 FMN1Q68DA7 1419 aa18.36■□□□□ 0.53
PCNX1-202ENST00000439984 KIF21BO75037 1637 aa18.35■□□□□ 0.53
PCNX1-202ENST00000439984 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
PCNX1-202ENST00000439984 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.53
PCNX1-202ENST00000439984 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
PCNX1-202ENST00000439984 RALBP1Q15311 655 aa18.33■□□□□ 0.53
PCNX1-202ENST00000439984 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-202ENST00000439984 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-202ENST00000439984 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.53
PCNX1-202ENST00000439984 IGF1RP08069 1367 aa18.32■□□□□ 0.52
PCNX1-202ENST00000439984 SKOR2Q2VWA4 1001 aaPredicted RBP18.32■□□□□ 0.52
PCNX1-202ENST00000439984 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
PCNX1-202ENST00000439984 TMF1P82094 1093 aa18.32■□□□□ 0.52
PCNX1-202ENST00000439984 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
PCNX1-202ENST00000439984 TPM2P07951 284 aa18.31■□□□□ 0.52
PCNX1-202ENST00000439984 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
PCNX1-202ENST00000439984 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
PCNX1-202ENST00000439984 RRP9O43818 475 aaKnown RBP18.29■□□□□ 0.52
PCNX1-202ENST00000439984 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
PCNX1-202ENST00000439984 ZNF592Q92610 1267 aa18.29■□□□□ 0.52
PCNX1-202ENST00000439984 MRE11P49959 708 aa18.28■□□□□ 0.52
PCNX1-202ENST00000439984 OS9Q13438 667 aaPredicted RBP18.28■□□□□ 0.52
PCNX1-202ENST00000439984 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
PCNX1-202ENST00000439984 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
PCNX1-202ENST00000439984 ZMYND15Q9H091 742 aa18.27■□□□□ 0.52
PCNX1-202ENST00000439984 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
PCNX1-202ENST00000439984 CHMP5Q9NZZ3 219 aa18.27■□□□□ 0.52
PCNX1-202ENST00000439984 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCNX1-202ENST00000439984 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms