RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 CREBZFQ9NS37 354 aa17.15■□□□□ 0.34
LMO3-207ENST00000439600 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
LMO3-207ENST00000439600 EFCAB5A4FU69 1503 aa17.15■□□□□ 0.34
LMO3-207ENST00000439600 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
LMO3-207ENST00000439600 NUBP1P53384 320 aa17.12■□□□□ 0.33
LMO3-207ENST00000439600 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
LMO3-207ENST00000439600 PTPRGP23470 1445 aa17.12■□□□□ 0.33
LMO3-207ENST00000439600 DISP1Q96F81 1524 aa17.11■□□□□ 0.33
LMO3-207ENST00000439600 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
LMO3-207ENST00000439600 FMN1Q68DA7 1419 aa17.08■□□□□ 0.32
LMO3-207ENST00000439600 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
LMO3-207ENST00000439600 TTBK1Q5TCY1 1321 aaPredicted RBP17.06■□□□□ 0.32
LMO3-207ENST00000439600 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
LMO3-207ENST00000439600 MNX1P50219 401 aaPredicted RBP17.05■□□□□ 0.32
LMO3-207ENST00000439600 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
LMO3-207ENST00000439600 FHOD3Q2V2M9 1422 aa17.04■□□□□ 0.32
LMO3-207ENST00000439600 NPM1P06748 294 aaKnown RBP eCLIP17.02■□□□□ 0.32
LMO3-207ENST00000439600 FAM212AQ96EL1 285 aa17.02■□□□□ 0.32
LMO3-207ENST00000439600 DCAF8Q5TAQ9 597 aa17.01■□□□□ 0.31
LMO3-207ENST00000439600 HAP1P54257 671 aaPredicted RBP17■□□□□ 0.31
LMO3-207ENST00000439600 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
LMO3-207ENST00000439600 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
LMO3-207ENST00000439600 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
LMO3-207ENST00000439600 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
LMO3-207ENST00000439600 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
LMO3-207ENST00000439600 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
LMO3-207ENST00000439600 CASKIN1Q8WXD9 1431 aa16.95■□□□□ 0.3
LMO3-207ENST00000439600 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
LMO3-207ENST00000439600 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
LMO3-207ENST00000439600 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
LMO3-207ENST00000439600 CHRM1P11229 460 aaPredicted RBP16.91■□□□□ 0.3
LMO3-207ENST00000439600 PLB1Q6P1J6 1458 aa16.91■□□□□ 0.3
LMO3-207ENST00000439600 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
LMO3-207ENST00000439600 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
LMO3-207ENST00000439600 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
LMO3-207ENST00000439600 PAXIP1Q6ZW49 1069 aaPredicted RBP16.88■□□□□ 0.29
LMO3-207ENST00000439600 ABCA8O94911 1581 aa16.87■□□□□ 0.29
LMO3-207ENST00000439600 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
LMO3-207ENST00000439600 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
LMO3-207ENST00000439600 RIOK3O14730 519 aaKnown RBP16.86■□□□□ 0.29
LMO3-207ENST00000439600 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
LMO3-207ENST00000439600 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
LMO3-207ENST00000439600 RNF25Q96BH1 459 aaPredicted RBP16.86■□□□□ 0.29
LMO3-207ENST00000439600 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
LMO3-207ENST00000439600 RAPGEF6Q8TEU7 1601 aa16.84■□□□□ 0.29
LMO3-207ENST00000439600 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
LMO3-207ENST00000439600 NUP153P49790 1475 aaKnown RBP16.82■□□□□ 0.28
LMO3-207ENST00000439600 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
LMO3-207ENST00000439600 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
LMO3-207ENST00000439600 ATP10BO94823 1461 aa16.81■□□□□ 0.28
LMO3-207ENST00000439600 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
LMO3-207ENST00000439600 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
LMO3-207ENST00000439600 MAP3K1Q13233 1512 aa16.79■□□□□ 0.28
LMO3-207ENST00000439600 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
LMO3-207ENST00000439600 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
LMO3-207ENST00000439600 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
LMO3-207ENST00000439600 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
LMO3-207ENST00000439600 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
LMO3-207ENST00000439600 FARP1Q9Y4F1 1045 aaPredicted RBP16.73■□□□□ 0.27
LMO3-207ENST00000439600 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
LMO3-207ENST00000439600 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
LMO3-207ENST00000439600 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
LMO3-207ENST00000439600 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
LMO3-207ENST00000439600 CDK13Q14004 1512 aaKnown RBP16.69■□□□□ 0.26
LMO3-207ENST00000439600 TROQ12816 1431 aaPredicted RBP16.69■□□□□ 0.26
LMO3-207ENST00000439600 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
LMO3-207ENST00000439600 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
LMO3-207ENST00000439600 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
LMO3-207ENST00000439600 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
LMO3-207ENST00000439600 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
LMO3-207ENST00000439600 PYGBP11216 843 aa16.66■□□□□ 0.26
LMO3-207ENST00000439600 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
LMO3-207ENST00000439600 PRKAR2AP13861 404 aaKnown RBP16.65■□□□□ 0.26
LMO3-207ENST00000439600 STK25O00506 426 aa16.64■□□□□ 0.25
LMO3-207ENST00000439600 FAM69CQ0P6D2 419 aa16.62■□□□□ 0.25
LMO3-207ENST00000439600 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
LMO3-207ENST00000439600 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
LMO3-207ENST00000439600 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
LMO3-207ENST00000439600 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
LMO3-207ENST00000439600 ZNF467Q7Z7K2 595 aaPredicted RBP16.58■□□□□ 0.24
LMO3-207ENST00000439600 CFAP43Q8NDM7 1665 aa16.58■□□□□ 0.24
LMO3-207ENST00000439600 ABCC10Q5T3U5 1492 aa16.57■□□□□ 0.24
LMO3-207ENST00000439600 BCANQ96GW7 911 aa16.57■□□□□ 0.24
LMO3-207ENST00000439600 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
LMO3-207ENST00000439600 KDM2AQ9Y2K7 1162 aa16.57■□□□□ 0.24
LMO3-207ENST00000439600 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
LMO3-207ENST00000439600 MAGI3Q5TCQ9 1506 aa16.55■□□□□ 0.24
LMO3-207ENST00000439600 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
LMO3-207ENST00000439600 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
LMO3-207ENST00000439600 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
LMO3-207ENST00000439600 RYDENQ9NUL5 291 aaKnown RBP16.55■□□□□ 0.24
LMO3-207ENST00000439600 CFDP1Q9UEE9 299 aaPredicted RBP16.55■□□□□ 0.24
LMO3-207ENST00000439600 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
LMO3-207ENST00000439600 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
LMO3-207ENST00000439600 KDM4FA0A1W2PPD8 638 aa16.54■□□□□ 0.24
LMO3-207ENST00000439600 NKX1-1Q15270 411 aaPredicted RBP16.54■□□□□ 0.24
LMO3-207ENST00000439600 KIF14Q15058 1648 aa16.54■□□□□ 0.24
LMO3-207ENST00000439600 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
LMO3-207ENST00000439600 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
LMO3-207ENST00000439600 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms