RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
LSMEM1-202ENST00000439068 TSHZ2Q9NRE2 1034 aa15.41■□□□□ 0.06
LSMEM1-202ENST00000439068 KDM2AQ9Y2K7 1162 aa15.41■□□□□ 0.06
LSMEM1-202ENST00000439068 ERICH3Q5RHP9 1530 aa15.41■□□□□ 0.06
LSMEM1-202ENST00000439068 TOP2BQ02880 1626 aa15.38■□□□□ 0.05
LSMEM1-202ENST00000439068 SHROOM2Q13796 1616 aa15.37■□□□□ 0.05
LSMEM1-202ENST00000439068 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
LSMEM1-202ENST00000439068 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.05
LSMEM1-202ENST00000439068 NKX1-1Q15270 411 aaPredicted RBP15.36■□□□□ 0.05
LSMEM1-202ENST00000439068 STK25O00506 426 aa15.34■□□□□ 0.05
LSMEM1-202ENST00000439068 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
LSMEM1-202ENST00000439068 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
LSMEM1-202ENST00000439068 ABCC10Q5T3U5 1492 aa15.32■□□□□ 0.04
LSMEM1-202ENST00000439068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.31■□□□□ 0.04
LSMEM1-202ENST00000439068 ZFP91Q96JP5 570 aaPredicted RBP15.31■□□□□ 0.04
LSMEM1-202ENST00000439068 CHRDL2Q6WN34 429 aa15.3■□□□□ 0.04
LSMEM1-202ENST00000439068 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
LSMEM1-202ENST00000439068 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.04
LSMEM1-202ENST00000439068 KIF13AQ9H1H9 1805 aa15.27■□□□□ 0.03
LSMEM1-202ENST00000439068 STK24Q9Y6E0 443 aa15.26■□□□□ 0.03
LSMEM1-202ENST00000439068 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
LSMEM1-202ENST00000439068 SGIP1Q9BQI5 828 aa15.24■□□□□ 0.03
LSMEM1-202ENST00000439068 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
LSMEM1-202ENST00000439068 GTPBP6O43824 516 aaPredicted RBP15.23■□□□□ 0.03
LSMEM1-202ENST00000439068 IGF1RP08069 1367 aa15.22■□□□□ 0.03
LSMEM1-202ENST00000439068 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 PTPRGP23470 1445 aa15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 KDM4FA0A1W2PPD8 638 aa15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 PCDHB8Q9UN66 801 aa15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 CCDC61Q9Y6R9 512 aa15.21■□□□□ 0.03
LSMEM1-202ENST00000439068 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
LSMEM1-202ENST00000439068 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
LSMEM1-202ENST00000439068 CARMIL2Q6F5E8 1435 aa15.17■□□□□ 0.02
LSMEM1-202ENST00000439068 DIP2BQ9P265 1576 aa15.17■□□□□ 0.02
LSMEM1-202ENST00000439068 KDM6BO15054 1643 aa15.16■□□□□ 0.02
LSMEM1-202ENST00000439068 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
LSMEM1-202ENST00000439068 ZNF467Q7Z7K2 595 aaPredicted RBP15.14■□□□□ 0.01
LSMEM1-202ENST00000439068 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
LSMEM1-202ENST00000439068 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
LSMEM1-202ENST00000439068 BCANQ96GW7 911 aa15.12■□□□□ 0.01
LSMEM1-202ENST00000439068 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
LSMEM1-202ENST00000439068 TSPOAP1O95153 1857 aa15.1■□□□□ 0.01
LSMEM1-202ENST00000439068 PDAP1Q13442 181 aaKnown RBP15.09■□□□□ 0.01
LSMEM1-202ENST00000439068 CUL7Q14999 1698 aa15.09■□□□□ 0.01
LSMEM1-202ENST00000439068 ASXL2Q76L83 1435 aa15.08■□□□□ 0
LSMEM1-202ENST00000439068 ABCC2Q92887 1545 aa15.07■□□□□ 0
LSMEM1-202ENST00000439068 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
LSMEM1-202ENST00000439068 MAP3K13O43283 966 aa15.06■□□□□ 0
LSMEM1-202ENST00000439068 PSEN1P49768 467 aa15.06■□□□□ 0
LSMEM1-202ENST00000439068 ILDR1Q86SU0 546 aaPredicted RBP15.06■□□□□ 0
LSMEM1-202ENST00000439068 IFNL1Q8IU54 200 aa15.05■□□□□ -0
LSMEM1-202ENST00000439068 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
LSMEM1-202ENST00000439068 UACAQ9BZF9 1416 aa15.04■□□□□ -0
LSMEM1-202ENST00000439068 KIF12Q96FN5 646 aa15.04■□□□□ -0
LSMEM1-202ENST00000439068 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
LSMEM1-202ENST00000439068 UHRF1BP1LA0JNW5 1464 aa15.01□□□□□ -0.01
LSMEM1-202ENST00000439068 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
LSMEM1-202ENST00000439068 GLI2P10070 1586 aa15□□□□□ -0.01
LSMEM1-202ENST00000439068 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
LSMEM1-202ENST00000439068 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
LSMEM1-202ENST00000439068 TEX14Q8IWB6 1497 aa14.99□□□□□ -0.01
LSMEM1-202ENST00000439068 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
LSMEM1-202ENST00000439068 ADGRL1O94910 1474 aa14.96□□□□□ -0.01
LSMEM1-202ENST00000439068 EPRSP07814 1512 aaKnown RBP14.95□□□□□ -0.02
LSMEM1-202ENST00000439068 PRKCSHP14314 528 aaPredicted RBP14.94□□□□□ -0.02
LSMEM1-202ENST00000439068 KDM5BQ9UGL1 1544 aa14.93□□□□□ -0.02
LSMEM1-202ENST00000439068 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
LSMEM1-202ENST00000439068 RYDENQ9NUL5 291 aaKnown RBP14.93□□□□□ -0.02
LSMEM1-202ENST00000439068 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
LSMEM1-202ENST00000439068 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
LSMEM1-202ENST00000439068 COL17A1Q9UMD9 1497 aaPredicted RBP14.91□□□□□ -0.02
LSMEM1-202ENST00000439068 MFRPQ9BY79 579 aa14.91□□□□□ -0.02
LSMEM1-202ENST00000439068 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
LSMEM1-202ENST00000439068 EFCAB3Q8N7B9 438 aa14.88□□□□□ -0.03
LSMEM1-202ENST00000439068 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
LSMEM1-202ENST00000439068 PPRC1Q5VV67 1664 aaKnown RBP14.87□□□□□ -0.03
LSMEM1-202ENST00000439068 CD109Q6YHK3 1445 aa14.87□□□□□ -0.03
LSMEM1-202ENST00000439068 WDR7Q9Y4E6 1490 aa14.87□□□□□ -0.03
LSMEM1-202ENST00000439068 CADPS2Q86UW7 1296 aa14.86□□□□□ -0.03
LSMEM1-202ENST00000439068 MAP3K4Q9Y6R4 1608 aa14.85□□□□□ -0.03
LSMEM1-202ENST00000439068 GOLGA3Q08378 1498 aa14.84□□□□□ -0.03
LSMEM1-202ENST00000439068 ZCCHC11Q5TAX3 1644 aaKnown RBP14.83□□□□□ -0.04
LSMEM1-202ENST00000439068 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
LSMEM1-202ENST00000439068 PPP1R37O75864 691 aa14.82□□□□□ -0.04
LSMEM1-202ENST00000439068 TRPC6Q9Y210 931 aa14.82□□□□□ -0.04
LSMEM1-202ENST00000439068 PHF8Q9UPP1 1060 aa14.81□□□□□ -0.04
LSMEM1-202ENST00000439068 MAGI3Q5TCQ9 1506 aa14.81□□□□□ -0.04
LSMEM1-202ENST00000439068 KIAA0556O60303 1618 aa14.81□□□□□ -0.04
LSMEM1-202ENST00000439068 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
LSMEM1-202ENST00000439068 FBXO22Q8NEZ5 403 aa14.79□□□□□ -0.04
LSMEM1-202ENST00000439068 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
LSMEM1-202ENST00000439068 PHLDB1Q86UU1 1377 aa14.77□□□□□ -0.04
LSMEM1-202ENST00000439068 NBR1Q14596 966 aa14.75□□□□□ -0.05
LSMEM1-202ENST00000439068 TPRNQ4KMQ1 711 aa14.75□□□□□ -0.05
LSMEM1-202ENST00000439068 SOX12O15370 315 aa14.74□□□□□ -0.05
LSMEM1-202ENST00000439068 NLRP6P59044 892 aa14.74□□□□□ -0.05
LSMEM1-202ENST00000439068 FBXO41Q8TF61 875 aa14.74□□□□□ -0.05
LSMEM1-202ENST00000439068 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
LSMEM1-202ENST00000439068 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms