RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 TMF1P82094 1093 aa17.56■□□□□ 0.4
LRCH3-206ENST00000438796 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
LRCH3-206ENST00000438796 KANK1Q14678 1352 aa17.56■□□□□ 0.4
LRCH3-206ENST00000438796 NOC3LQ8WTT2 800 aaKnown RBP17.55■□□□□ 0.4
LRCH3-206ENST00000438796 HDGFP51858 240 aaKnown RBP17.54■□□□□ 0.4
LRCH3-206ENST00000438796 KIAA2012Q0VF49 1180 aa17.53■□□□□ 0.4
LRCH3-206ENST00000438796 MS4A1P11836 297 aa17.53■□□□□ 0.4
LRCH3-206ENST00000438796 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.4
LRCH3-206ENST00000438796 CREBRFQ8IUR6 639 aa17.52■□□□□ 0.4
LRCH3-206ENST00000438796 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.39
LRCH3-206ENST00000438796 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.39
LRCH3-206ENST00000438796 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.39
LRCH3-206ENST00000438796 GORABQ5T7V8 394 aa17.51■□□□□ 0.39
LRCH3-206ENST00000438796 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
LRCH3-206ENST00000438796 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
LRCH3-206ENST00000438796 MSNP26038 577 aaKnown RBP17.49■□□□□ 0.39
LRCH3-206ENST00000438796 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
LRCH3-206ENST00000438796 VPS53Q5VIR6 699 aa17.48■□□□□ 0.39
LRCH3-206ENST00000438796 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
LRCH3-206ENST00000438796 FOXD1Q16676 465 aa17.48■□□□□ 0.39
LRCH3-206ENST00000438796 CEP162Q5TB80 1403 aa17.48■□□□□ 0.39
LRCH3-206ENST00000438796 CCNB3Q8WWL7 1395 aa17.47■□□□□ 0.39
LRCH3-206ENST00000438796 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
LRCH3-206ENST00000438796 NUTM2FA1L443 756 aa17.47■□□□□ 0.39
LRCH3-206ENST00000438796 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
LRCH3-206ENST00000438796 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.38
LRCH3-206ENST00000438796 GZF1Q9H116 711 aaPredicted RBP17.45■□□□□ 0.38
LRCH3-206ENST00000438796 NOL8Q76FK4 1167 aaKnown RBP17.44■□□□□ 0.38
LRCH3-206ENST00000438796 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
LRCH3-206ENST00000438796 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
LRCH3-206ENST00000438796 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
LRCH3-206ENST00000438796 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-206ENST00000438796 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
LRCH3-206ENST00000438796 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■□□ 16.5
LRCH3-206ENST00000438796 RASSF8Q8NHQ8 419 aa17.42■□□□□ 0.38
LRCH3-206ENST00000438796 MSH5O43196 834 aa17.41■□□□□ 0.38
LRCH3-206ENST00000438796 SLC4A10Q6U841 1118 aa17.41■□□□□ 0.38
LRCH3-206ENST00000438796 TOMM22Q9NS69 142 aa17.39■□□□□ 0.37
LRCH3-206ENST00000438796 FOXD4L1Q9NU39 408 aa17.39■□□□□ 0.37
LRCH3-206ENST00000438796 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
LRCH3-206ENST00000438796 A0A0U1RQG5 324 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-206ENST00000438796 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
LRCH3-206ENST00000438796 GTF2E1P29083 439 aaPredicted RBP17.38■□□□□ 0.37
LRCH3-206ENST00000438796 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
LRCH3-206ENST00000438796 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
LRCH3-206ENST00000438796 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
LRCH3-206ENST00000438796 RAD21O60216 631 aa17.34■□□□□ 0.37
LRCH3-206ENST00000438796 SLKQ9H2G2 1235 aaPredicted RBP17.34■□□□□ 0.37
LRCH3-206ENST00000438796 MARCH6O60337 910 aa17.34■□□□□ 0.37
LRCH3-206ENST00000438796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.33■□□□□ 0.37
LRCH3-206ENST00000438796 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.37
LRCH3-206ENST00000438796 RB1CC1Q8TDY2 1594 aa17.33■□□□□ 0.36
LRCH3-206ENST00000438796 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
LRCH3-206ENST00000438796 NGDNQ8NEJ9 315 aaKnown RBP17.33■□□□□ 0.36
LRCH3-206ENST00000438796 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
LRCH3-206ENST00000438796 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
LRCH3-206ENST00000438796 GPATCH3Q96I76 525 aa17.32■□□□□ 0.36
LRCH3-206ENST00000438796 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
LRCH3-206ENST00000438796 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
LRCH3-206ENST00000438796 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
LRCH3-206ENST00000438796 PKD2Q13563 968 aa17.3■□□□□ 0.36
LRCH3-206ENST00000438796 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
LRCH3-206ENST00000438796 PES1O00541 588 aaKnown RBP17.3■□□□□ 0.36
LRCH3-206ENST00000438796 AMPHP49418 695 aa17.29■□□□□ 0.36
LRCH3-206ENST00000438796 NGEFQ8N5V2 710 aa17.29■□□□□ 0.36
LRCH3-206ENST00000438796 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
LRCH3-206ENST00000438796 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
LRCH3-206ENST00000438796 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
LRCH3-206ENST00000438796 KRI1Q8N9T8 703 aaKnown RBP17.28■□□□□ 0.36
LRCH3-206ENST00000438796 TPM4P67936 248 aa17.27■□□□□ 0.36
LRCH3-206ENST00000438796 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
LRCH3-206ENST00000438796 EVA1CP58658 441 aa17.27■□□□□ 0.36
LRCH3-206ENST00000438796 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
LRCH3-206ENST00000438796 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
LRCH3-206ENST00000438796 EID1Q9Y6B2 187 aa17.25■□□□□ 0.35
LRCH3-206ENST00000438796 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
LRCH3-206ENST00000438796 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
LRCH3-206ENST00000438796 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
LRCH3-206ENST00000438796 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
LRCH3-206ENST00000438796 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
LRCH3-206ENST00000438796 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
LRCH3-206ENST00000438796 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
LRCH3-206ENST00000438796 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
LRCH3-206ENST00000438796 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
LRCH3-206ENST00000438796 RWDD1Q9H446 243 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-206ENST00000438796 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
LRCH3-206ENST00000438796 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
LRCH3-206ENST00000438796 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
LRCH3-206ENST00000438796 SYTL4Q96C24 671 aaPredicted RBP17.2■□□□□ 0.34
LRCH3-206ENST00000438796 RCAN3Q9UKA8 241 aa17.2■□□□□ 0.34
LRCH3-206ENST00000438796 KIF3BO15066 747 aa17.19■□□□□ 0.34
LRCH3-206ENST00000438796 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-206ENST00000438796 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
LRCH3-206ENST00000438796 EEA1Q15075 1411 aa17.19■□□□□ 0.34
LRCH3-206ENST00000438796 RRP7AQ9Y3A4 280 aaKnown RBP17.18■□□□□ 0.34
LRCH3-206ENST00000438796 TCEAL9Q9UHQ7 104 aa17.18■□□□□ 0.34
LRCH3-206ENST00000438796 TPD52L1Q16890 204 aaPredicted RBP17.18■□□□□ 0.34
LRCH3-206ENST00000438796 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
LRCH3-206ENST00000438796 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
LRCH3-206ENST00000438796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms