RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 MIA2Q96PC5 1412 aa18.72■□□□□ 0.59
HLA-DOB-206ENST00000438763 KIF14Q15058 1648 aa18.71■□□□□ 0.58
HLA-DOB-206ENST00000438763 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
HLA-DOB-206ENST00000438763 GPATCH8Q9UKJ3 1502 aaKnown RBP18.67■□□□□ 0.58
HLA-DOB-206ENST00000438763 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
HLA-DOB-206ENST00000438763 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
HLA-DOB-206ENST00000438763 KCNH8Q96L42 1107 aa18.64■□□□□ 0.57
HLA-DOB-206ENST00000438763 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
HLA-DOB-206ENST00000438763 WDR7Q9Y4E6 1490 aa18.63■□□□□ 0.57
HLA-DOB-206ENST00000438763 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
HLA-DOB-206ENST00000438763 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
HLA-DOB-206ENST00000438763 ITGAEP38570 1179 aa18.6■□□□□ 0.57
HLA-DOB-206ENST00000438763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.57
HLA-DOB-206ENST00000438763 CD109Q6YHK3 1445 aa18.58■□□□□ 0.56
HLA-DOB-206ENST00000438763 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
HLA-DOB-206ENST00000438763 PTPRMP28827 1452 aa18.56■□□□□ 0.56
HLA-DOB-206ENST00000438763 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
HLA-DOB-206ENST00000438763 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
HLA-DOB-206ENST00000438763 ZNF777Q9ULD5 760 aaPredicted RBP18.54■□□□□ 0.56
HLA-DOB-206ENST00000438763 PLCH2O75038 1416 aa18.53■□□□□ 0.56
HLA-DOB-206ENST00000438763 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.56
HLA-DOB-206ENST00000438763 PREX2Q70Z35 1606 aa18.52■□□□□ 0.56
HLA-DOB-206ENST00000438763 PTPRKQ15262 1439 aa18.51■□□□□ 0.55
HLA-DOB-206ENST00000438763 ADAMTSL3P82987 1691 aa18.5■□□□□ 0.55
HLA-DOB-206ENST00000438763 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
HLA-DOB-206ENST00000438763 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
HLA-DOB-206ENST00000438763 CDC42BPBQ9Y5S2 1711 aa18.5■□□□□ 0.55
HLA-DOB-206ENST00000438763 ABCA9Q8IUA7 1624 aa18.49■□□□□ 0.55
HLA-DOB-206ENST00000438763 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
HLA-DOB-206ENST00000438763 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
HLA-DOB-206ENST00000438763 ARAP3Q8WWN8 1544 aa18.48■□□□□ 0.55
HLA-DOB-206ENST00000438763 ABCC5O15440 1437 aa18.48■□□□□ 0.55
HLA-DOB-206ENST00000438763 DAPK1P53355 1430 aa18.48■□□□□ 0.55
HLA-DOB-206ENST00000438763 RSPH4AQ5TD94 716 aa18.47■□□□□ 0.55
HLA-DOB-206ENST00000438763 DNMT1P26358 1616 aaKnown RBP18.47■□□□□ 0.55
HLA-DOB-206ENST00000438763 SETD5Q9C0A6 1442 aa18.46■□□□□ 0.55
HLA-DOB-206ENST00000438763 HRCP23327 699 aa18.45■□□□□ 0.54
HLA-DOB-206ENST00000438763 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
HLA-DOB-206ENST00000438763 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
HLA-DOB-206ENST00000438763 KIAA1107Q9UPP5 1409 aa18.44■□□□□ 0.54
HLA-DOB-206ENST00000438763 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
HLA-DOB-206ENST00000438763 HNRNPMP52272 730 aaKnown RBP eCLIP18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 HSPA2P54652 639 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 HFM1A2PYH4 1435 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 AKNAQ7Z591 1439 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 SOCS7O14512 581 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
HLA-DOB-206ENST00000438763 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
HLA-DOB-206ENST00000438763 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
HLA-DOB-206ENST00000438763 RAB3GAP2Q9H2M9 1393 aa18.4■□□□□ 0.54
HLA-DOB-206ENST00000438763 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
HLA-DOB-206ENST00000438763 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
HLA-DOB-206ENST00000438763 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
HLA-DOB-206ENST00000438763 ARID4BQ4LE39 1312 aaPredicted RBP18.39■□□□□ 0.53
HLA-DOB-206ENST00000438763 BCORL1Q5H9F3 1711 aa18.39■□□□□ 0.53
HLA-DOB-206ENST00000438763 NAIPQ13075 1403 aa18.39■□□□□ 0.53
HLA-DOB-206ENST00000438763 FANCAO15360 1455 aa18.38■□□□□ 0.53
HLA-DOB-206ENST00000438763 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
HLA-DOB-206ENST00000438763 CCER1Q8TC90 406 aaPredicted RBP18.38■□□□□ 0.53
HLA-DOB-206ENST00000438763 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
HLA-DOB-206ENST00000438763 CCDC141Q6ZP82 1450 aa18.37■□□□□ 0.53
HLA-DOB-206ENST00000438763 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
HLA-DOB-206ENST00000438763 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
HLA-DOB-206ENST00000438763 ADGRL2O95490 1459 aa18.36■□□□□ 0.53
HLA-DOB-206ENST00000438763 SYCP2Q9BX26 1530 aa18.36■□□□□ 0.53
HLA-DOB-206ENST00000438763 CROCC2H7BZ55 1655 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 RIMS1Q86UR5 1692 aaKnown RBP18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 ABCC1P33527 1531 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 ARHGEF12Q9NZN5 1544 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 C9orf84Q5VXU9 1444 aa18.34■□□□□ 0.53
HLA-DOB-206ENST00000438763 ACIN1Q9UKV3 1341 aaKnown RBP18.33■□□□□ 0.52
HLA-DOB-206ENST00000438763 ZEB1P37275 1124 aaPredicted RBP18.3■□□□□ 0.52
HLA-DOB-206ENST00000438763 GCC2Q8IWJ2 1684 aa18.3■□□□□ 0.52
HLA-DOB-206ENST00000438763 ADGBQ8N7X0 1667 aa18.3■□□□□ 0.52
HLA-DOB-206ENST00000438763 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
HLA-DOB-206ENST00000438763 MAST1Q9Y2H9 1570 aa18.3■□□□□ 0.52
HLA-DOB-206ENST00000438763 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
HLA-DOB-206ENST00000438763 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
HLA-DOB-206ENST00000438763 FRMPD1Q5SYB0 1578 aa18.29■□□□□ 0.52
HLA-DOB-206ENST00000438763 NEO1Q92859 1461 aa18.29■□□□□ 0.52
HLA-DOB-206ENST00000438763 DHX57Q6P158 1386 aaKnown RBP18.29■□□□□ 0.52
HLA-DOB-206ENST00000438763 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
HLA-DOB-206ENST00000438763 RTEL1-TNFRSF6BF6WH68 1400 aa18.25■□□□□ 0.51
HLA-DOB-206ENST00000438763 AFAP1Q8N556 730 aa18.25■□□□□ 0.51
HLA-DOB-206ENST00000438763 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
HLA-DOB-206ENST00000438763 KIF15Q9NS87 1388 aa18.23■□□□□ 0.51
HLA-DOB-206ENST00000438763 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
HLA-DOB-206ENST00000438763 ARHGEF40Q8TER5 1519 aa18.21■□□□□ 0.51
HLA-DOB-206ENST00000438763 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
HLA-DOB-206ENST00000438763 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
HLA-DOB-206ENST00000438763 SPATA31D1Q6ZQQ2 1576 aa18.2■□□□□ 0.5
HLA-DOB-206ENST00000438763 TRIM52Q96A61 297 aa18.18■□□□□ 0.5
HLA-DOB-206ENST00000438763 DENND4BO75064 1496 aaPredicted RBP18.18■□□□□ 0.5
HLA-DOB-206ENST00000438763 POGZQ7Z3K3 1410 aa18.18■□□□□ 0.5
HLA-DOB-206ENST00000438763 MLECQ14165 292 aa18.17■□□□□ 0.5
HLA-DOB-206ENST00000438763 SIGLEC1Q9BZZ2 1709 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms