RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
CUBN-204ENST00000438254 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0
CUBN-204ENST00000438254 ARID3CA6NKF2 412 aa15.07■□□□□ 0
CUBN-204ENST00000438254 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
CUBN-204ENST00000438254 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
CUBN-204ENST00000438254 MTUS2Q5JR59 1369 aa15.07■□□□□ 0
CUBN-204ENST00000438254 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
CUBN-204ENST00000438254 SUPT6HQ7KZ85 1726 aaKnown RBP15.04■□□□□ -0
CUBN-204ENST00000438254 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
CUBN-204ENST00000438254 NCOA2Q15596 1464 aa15.03■□□□□ -0
CUBN-204ENST00000438254 CYB5RLQ6IPT4 315 aa15.03■□□□□ -0
CUBN-204ENST00000438254 AKT1S1Q96B36 256 aa15.03■□□□□ -0
CUBN-204ENST00000438254 PHLDB1Q86UU1 1377 aa15.02■□□□□ -0
CUBN-204ENST00000438254 KIF14Q15058 1648 aa15.02□□□□□ -0.01
CUBN-204ENST00000438254 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
CUBN-204ENST00000438254 ABCC10Q5T3U5 1492 aa15.01□□□□□ -0.01
CUBN-204ENST00000438254 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
CUBN-204ENST00000438254 MAPKBP1O60336 1514 aa14.99□□□□□ -0.01
CUBN-204ENST00000438254 WDR7Q9Y4E6 1490 aa14.99□□□□□ -0.01
CUBN-204ENST00000438254 RRBP1Q9P2E9 1410 aaKnown RBP14.99□□□□□ -0.01
CUBN-204ENST00000438254 ASXL2Q76L83 1435 aa14.98□□□□□ -0.01
CUBN-204ENST00000438254 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
CUBN-204ENST00000438254 MYOM3Q5VTT5 1437 aa14.96□□□□□ -0.01
CUBN-204ENST00000438254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.96□□□□□ -0.02
CUBN-204ENST00000438254 GPATCH8Q9UKJ3 1502 aaKnown RBP14.94□□□□□ -0.02
CUBN-204ENST00000438254 TRIM26Q12899 539 aaPredicted RBP14.94□□□□□ -0.02
CUBN-204ENST00000438254 TTC37Q6PGP7 1564 aa14.94□□□□□ -0.02
CUBN-204ENST00000438254 NPM1P06748 294 aaKnown RBP eCLIP14.93□□□□□ -0.02
CUBN-204ENST00000438254 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
CUBN-204ENST00000438254 CDC42BPAQ5VT25 1732 aa14.92□□□□□ -0.02
CUBN-204ENST00000438254 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
CUBN-204ENST00000438254 MIA2Q96PC5 1412 aa14.92□□□□□ -0.02
CUBN-204ENST00000438254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.91□□□□□ -0.02
CUBN-204ENST00000438254 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
CUBN-204ENST00000438254 CCNB3Q8WWL7 1395 aa14.9□□□□□ -0.02
CUBN-204ENST00000438254 ITSN2Q9NZM3 1697 aa14.9□□□□□ -0.02
CUBN-204ENST00000438254 PREX2Q70Z35 1606 aa14.89□□□□□ -0.03
CUBN-204ENST00000438254 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
CUBN-204ENST00000438254 CDC42BPBQ9Y5S2 1711 aa14.87□□□□□ -0.03
CUBN-204ENST00000438254 GLI2P10070 1586 aa14.87□□□□□ -0.03
CUBN-204ENST00000438254 PTPN23Q9H3S7 1636 aa14.87□□□□□ -0.03
CUBN-204ENST00000438254 PLCH2O75038 1416 aa14.86□□□□□ -0.03
CUBN-204ENST00000438254 MYO5CQ9NQX4 1742 aa14.86□□□□□ -0.03
CUBN-204ENST00000438254 KCNH8Q96L42 1107 aa14.85□□□□□ -0.03
CUBN-204ENST00000438254 DIP2BQ9P265 1576 aa14.85□□□□□ -0.03
CUBN-204ENST00000438254 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
CUBN-204ENST00000438254 MAP3K4Q9Y6R4 1608 aa14.81□□□□□ -0.04
CUBN-204ENST00000438254 CAMSAP2Q08AD1 1489 aa14.81□□□□□ -0.04
CUBN-204ENST00000438254 SAMD9LQ8IVG5 1584 aa14.81□□□□□ -0.04
CUBN-204ENST00000438254 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
CUBN-204ENST00000438254 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
CUBN-204ENST00000438254 ZNF644Q9H582 1327 aaPredicted RBP14.79□□□□□ -0.04
CUBN-204ENST00000438254 ARHGAP5Q13017 1502 aa14.78□□□□□ -0.04
CUBN-204ENST00000438254 SP7Q8TDD2 431 aaPredicted RBP14.78□□□□□ -0.04
CUBN-204ENST00000438254 MBD5Q9P267 1494 aa14.77□□□□□ -0.04
CUBN-204ENST00000438254 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
CUBN-204ENST00000438254 KIF13AQ9H1H9 1805 aa14.77□□□□□ -0.05
CUBN-204ENST00000438254 DNMT1P26358 1616 aaKnown RBP14.77□□□□□ -0.05
CUBN-204ENST00000438254 PTPRKQ15262 1439 aa14.76□□□□□ -0.05
CUBN-204ENST00000438254 KIAA1107Q9UPP5 1409 aa14.76□□□□□ -0.05
CUBN-204ENST00000438254 ABCC1P33527 1531 aa14.76□□□□□ -0.05
CUBN-204ENST00000438254 FAM50AQ14320 339 aaKnown RBP14.75□□□□□ -0.05
CUBN-204ENST00000438254 ARHGEF5Q12774 1597 aa14.75□□□□□ -0.05
CUBN-204ENST00000438254 FANCAO15360 1455 aa14.75□□□□□ -0.05
CUBN-204ENST00000438254 ABCC5O15440 1437 aa14.75□□□□□ -0.05
CUBN-204ENST00000438254 ARHGEF12Q9NZN5 1544 aa14.74□□□□□ -0.05
CUBN-204ENST00000438254 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
CUBN-204ENST00000438254 PPRC1Q5VV67 1664 aaKnown RBP14.74□□□□□ -0.05
CUBN-204ENST00000438254 DAPK1P53355 1430 aa14.74□□□□□ -0.05
CUBN-204ENST00000438254 EFCAB2Q5VUJ9 269 aa14.73□□□□□ -0.05
CUBN-204ENST00000438254 PIP4P2Q8N4L2 257 aa14.73□□□□□ -0.05
CUBN-204ENST00000438254 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
CUBN-204ENST00000438254 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
CUBN-204ENST00000438254 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
CUBN-204ENST00000438254 CFAP74Q9C0B2 1584 aa14.72□□□□□ -0.05
CUBN-204ENST00000438254 NEO1Q92859 1461 aa14.71□□□□□ -0.05
CUBN-204ENST00000438254 SHANK2Q9UPX8 1470 aa14.7□□□□□ -0.06
CUBN-204ENST00000438254 ATXN8OSP0DMR3 200 aa14.7□□□□□ -0.06
CUBN-204ENST00000438254 ZNF777Q9ULD5 760 aaPredicted RBP14.7□□□□□ -0.06
CUBN-204ENST00000438254 AKNAQ7Z591 1439 aa14.69□□□□□ -0.06
CUBN-204ENST00000438254 ADGRL2O95490 1459 aa14.69□□□□□ -0.06
CUBN-204ENST00000438254 CCDC141Q6ZP82 1450 aa14.69□□□□□ -0.06
CUBN-204ENST00000438254 MAST1Q9Y2H9 1570 aa14.68□□□□□ -0.06
CUBN-204ENST00000438254 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
CUBN-204ENST00000438254 HNRNPMP52272 730 aaKnown RBP eCLIP14.67□□□□□ -0.06
CUBN-204ENST00000438254 RSPH4AQ5TD94 716 aa14.67□□□□□ -0.06
CUBN-204ENST00000438254 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
CUBN-204ENST00000438254 ADGRL1O94910 1474 aa14.67□□□□□ -0.06
CUBN-204ENST00000438254 TRAPPC8Q9Y2L5 1435 aa14.66□□□□□ -0.06
CUBN-204ENST00000438254 ZBTB22O15209 634 aa14.65□□□□□ -0.06
CUBN-204ENST00000438254 ITGAEP38570 1179 aa14.65□□□□□ -0.06
CUBN-204ENST00000438254 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
CUBN-204ENST00000438254 SCAPERQ9BY12 1400 aa14.65□□□□□ -0.06
CUBN-204ENST00000438254 TEX14Q8IWB6 1497 aa14.64□□□□□ -0.07
CUBN-204ENST00000438254 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
CUBN-204ENST00000438254 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
CUBN-204ENST00000438254 ADGBQ8N7X0 1667 aa14.64□□□□□ -0.07
CUBN-204ENST00000438254 NAIPQ13075 1403 aa14.63□□□□□ -0.07
CUBN-204ENST00000438254 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
CUBN-204ENST00000438254 KDM5CP41229 1560 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms