RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 DNMT1P26358 1616 aaKnown RBP20.36■□□□□ 0.85
HLA-DPA1-243ENST00000437811 MYO5CQ9NQX4 1742 aa20.36■□□□□ 0.85
HLA-DPA1-243ENST00000437811 CFDP1Q9UEE9 299 aaPredicted RBP20.35■□□□□ 0.85
HLA-DPA1-243ENST00000437811 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
HLA-DPA1-243ENST00000437811 CDC42BPBQ9Y5S2 1711 aa20.35■□□□□ 0.85
HLA-DPA1-243ENST00000437811 ASXL2Q76L83 1435 aa20.33■□□□□ 0.84
HLA-DPA1-243ENST00000437811 DAPK1P53355 1430 aa20.31■□□□□ 0.84
HLA-DPA1-243ENST00000437811 SETD5Q9C0A6 1442 aa20.31■□□□□ 0.84
HLA-DPA1-243ENST00000437811 ZNF644Q9H582 1327 aaPredicted RBP20.31■□□□□ 0.84
HLA-DPA1-243ENST00000437811 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-DPA1-243ENST00000437811 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
HLA-DPA1-243ENST00000437811 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
HLA-DPA1-243ENST00000437811 ABCC5O15440 1437 aa20.29■□□□□ 0.84
HLA-DPA1-243ENST00000437811 AKNAQ7Z591 1439 aa20.29■□□□□ 0.84
HLA-DPA1-243ENST00000437811 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
HLA-DPA1-243ENST00000437811 SAMD9LQ8IVG5 1584 aa20.28■□□□□ 0.84
HLA-DPA1-243ENST00000437811 CCER1Q8TC90 406 aaPredicted RBP20.28■□□□□ 0.84
HLA-DPA1-243ENST00000437811 HFM1A2PYH4 1435 aa20.28■□□□□ 0.84
HLA-DPA1-243ENST00000437811 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.84
HLA-DPA1-243ENST00000437811 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
HLA-DPA1-243ENST00000437811 GCC2Q8IWJ2 1684 aa20.26■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ARHGEF5Q12774 1597 aa20.25■□□□□ 0.83
HLA-DPA1-243ENST00000437811 PLCH2O75038 1416 aa20.25■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
HLA-DPA1-243ENST00000437811 MAPKBP1O60336 1514 aa20.23■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ZEB1P37275 1124 aaPredicted RBP20.23■□□□□ 0.83
HLA-DPA1-243ENST00000437811 CYB5RLQ6IPT4 315 aa20.23■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ADGBQ8N7X0 1667 aa20.23■□□□□ 0.83
HLA-DPA1-243ENST00000437811 NAIPQ13075 1403 aa20.23■□□□□ 0.83
HLA-DPA1-243ENST00000437811 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
HLA-DPA1-243ENST00000437811 SHANK2Q9UPX8 1470 aa20.21■□□□□ 0.83
HLA-DPA1-243ENST00000437811 PLEKHH2Q8IVE3 1493 aa20.21■□□□□ 0.83
HLA-DPA1-243ENST00000437811 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
HLA-DPA1-243ENST00000437811 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
HLA-DPA1-243ENST00000437811 ADGRL2O95490 1459 aa20.19■□□□□ 0.82
HLA-DPA1-243ENST00000437811 SYCP2Q9BX26 1530 aa20.18■□□□□ 0.82
HLA-DPA1-243ENST00000437811 CHIC2Q9UKJ5 165 aa20.18■□□□□ 0.82
HLA-DPA1-243ENST00000437811 KIAA1107Q9UPP5 1409 aa20.17■□□□□ 0.82
HLA-DPA1-243ENST00000437811 CCDC141Q6ZP82 1450 aa20.17■□□□□ 0.82
HLA-DPA1-243ENST00000437811 ABCC1P33527 1531 aa20.16■□□□□ 0.82
HLA-DPA1-243ENST00000437811 EFCAB2Q5VUJ9 269 aa20.15■□□□□ 0.82
HLA-DPA1-243ENST00000437811 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
HLA-DPA1-243ENST00000437811 C9orf84Q5VXU9 1444 aa20.13■□□□□ 0.81
HLA-DPA1-243ENST00000437811 MAST1Q9Y2H9 1570 aa20.12■□□□□ 0.81
HLA-DPA1-243ENST00000437811 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
HLA-DPA1-243ENST00000437811 HNRNPMP52272 730 aaKnown RBP eCLIP20.11■□□□□ 0.81
HLA-DPA1-243ENST00000437811 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
HLA-DPA1-243ENST00000437811 ARHGEF12Q9NZN5 1544 aa20.11■□□□□ 0.81
HLA-DPA1-243ENST00000437811 KDM6BO15054 1643 aa20.11■□□□□ 0.81
HLA-DPA1-243ENST00000437811 FANCAO15360 1455 aa20.1■□□□□ 0.81
HLA-DPA1-243ENST00000437811 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
HLA-DPA1-243ENST00000437811 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
HLA-DPA1-243ENST00000437811 GLI2P10070 1586 aa20.09■□□□□ 0.81
HLA-DPA1-243ENST00000437811 CFAP74Q9C0B2 1584 aa20.09■□□□□ 0.81
HLA-DPA1-243ENST00000437811 CD109Q6YHK3 1445 aa20.07■□□□□ 0.8
HLA-DPA1-243ENST00000437811 TSPY4P0CV99 314 aa20.07■□□□□ 0.8
HLA-DPA1-243ENST00000437811 TSPY10P0CW01 314 aa20.07■□□□□ 0.8
HLA-DPA1-243ENST00000437811 PIAS4Q8N2W9 510 aaPredicted RBP20.07■□□□□ 0.8
HLA-DPA1-243ENST00000437811 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
HLA-DPA1-243ENST00000437811 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
HLA-DPA1-243ENST00000437811 DIP2BQ9P265 1576 aa20.04■□□□□ 0.8
HLA-DPA1-243ENST00000437811 TRAPPC8Q9Y2L5 1435 aa20.03■□□□□ 0.8
HLA-DPA1-243ENST00000437811 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.8
HLA-DPA1-243ENST00000437811 ADGRL1O94910 1474 aa20.02■□□□□ 0.8
HLA-DPA1-243ENST00000437811 KIF15Q9NS87 1388 aa19.99■□□□□ 0.79
HLA-DPA1-243ENST00000437811 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
HLA-DPA1-243ENST00000437811 NEO1Q92859 1461 aa19.98■□□□□ 0.79
HLA-DPA1-243ENST00000437811 SCAPERQ9BY12 1400 aa19.98■□□□□ 0.79
HLA-DPA1-243ENST00000437811 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
HLA-DPA1-243ENST00000437811 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
HLA-DPA1-243ENST00000437811 RTEL1-TNFRSF6BF6WH68 1400 aa19.96■□□□□ 0.79
HLA-DPA1-243ENST00000437811 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
HLA-DPA1-243ENST00000437811 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
HLA-DPA1-243ENST00000437811 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
HLA-DPA1-243ENST00000437811 TRIM52Q96A61 297 aa19.92■□□□□ 0.78
HLA-DPA1-243ENST00000437811 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
HLA-DPA1-243ENST00000437811 FAM69CQ0P6D2 419 aa19.91■□□□□ 0.78
HLA-DPA1-243ENST00000437811 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
HLA-DPA1-243ENST00000437811 POGZQ7Z3K3 1410 aa19.9■□□□□ 0.78
HLA-DPA1-243ENST00000437811 DENND4BO75064 1496 aaPredicted RBP19.9■□□□□ 0.78
HLA-DPA1-243ENST00000437811 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
HLA-DPA1-243ENST00000437811 KDM5CP41229 1560 aa19.9■□□□□ 0.78
HLA-DPA1-243ENST00000437811 PPRC1Q5VV67 1664 aaKnown RBP19.9■□□□□ 0.78
HLA-DPA1-243ENST00000437811 KDM5DQ9BY66 1539 aa19.89■□□□□ 0.78
HLA-DPA1-243ENST00000437811 PZPP20742 1482 aa19.89■□□□□ 0.77
HLA-DPA1-243ENST00000437811 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
HLA-DPA1-243ENST00000437811 UNC13BO14795 1591 aa19.88■□□□□ 0.77
HLA-DPA1-243ENST00000437811 KIDINS220Q9ULH0 1771 aa19.86■□□□□ 0.77
HLA-DPA1-243ENST00000437811 MPHOSPH9Q99550 1183 aa19.85■□□□□ 0.77
HLA-DPA1-243ENST00000437811 TEX14Q8IWB6 1497 aa19.85■□□□□ 0.77
HLA-DPA1-243ENST00000437811 HECW2Q9P2P5 1572 aa19.84■□□□□ 0.77
HLA-DPA1-243ENST00000437811 RICTORQ6R327 1708 aa19.83■□□□□ 0.77
HLA-DPA1-243ENST00000437811 TSPOAP1O95153 1857 aa19.83■□□□□ 0.77
HLA-DPA1-243ENST00000437811 MLH3Q9UHC1 1453 aa19.83■□□□□ 0.77
HLA-DPA1-243ENST00000437811 MAGI2Q86UL8 1455 aa19.81■□□□□ 0.76
HLA-DPA1-243ENST00000437811 NUP155O75694 1391 aa19.8■□□□□ 0.76
HLA-DPA1-243ENST00000437811 EIF2AK4Q9P2K8 1649 aaKnown RBP19.8■□□□□ 0.76
HLA-DPA1-243ENST00000437811 SLC4A1APQ9BWU0 796 aaKnown RBP19.79■□□□□ 0.76
HLA-DPA1-243ENST00000437811 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms