RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 GLI2P10070 1586 aa7.6□□□□□ -1.19
LINC01239-202ENST00000436786 KCNA4P22459 653 aa7.6□□□□□ -1.19
LINC01239-202ENST00000436786 ZNF692Q9BU19 519 aaPredicted RBP7.59□□□□□ -1.19
LINC01239-202ENST00000436786 KDM5BQ9UGL1 1544 aa7.59□□□□□ -1.19
LINC01239-202ENST00000436786 SSUH2Q9Y2M2 353 aa7.58□□□□□ -1.2
LINC01239-202ENST00000436786 FARP1Q9Y4F1 1045 aaPredicted RBP7.58□□□□□ -1.2
LINC01239-202ENST00000436786 KIAA0556O60303 1618 aa7.58□□□□□ -1.2
LINC01239-202ENST00000436786 PPRC1Q5VV67 1664 aaKnown RBP7.58□□□□□ -1.2
LINC01239-202ENST00000436786 EPRSP07814 1512 aaKnown RBP7.58□□□□□ -1.2
LINC01239-202ENST00000436786 ZCCHC11Q5TAX3 1644 aaKnown RBP7.56□□□□□ -1.2
LINC01239-202ENST00000436786 COL17A1Q9UMD9 1497 aaPredicted RBP7.56□□□□□ -1.2
LINC01239-202ENST00000436786 MAP3K4Q9Y6R4 1608 aa7.55□□□□□ -1.2
LINC01239-202ENST00000436786 GOLGA3Q08378 1498 aa7.54□□□□□ -1.2
LINC01239-202ENST00000436786 PRXQ9BXM0 1461 aa7.54□□□□□ -1.2
LINC01239-202ENST00000436786 TEX14Q8IWB6 1497 aa7.54□□□□□ -1.2
LINC01239-202ENST00000436786 WDR7Q9Y4E6 1490 aa7.54□□□□□ -1.2
LINC01239-202ENST00000436786 KCNH8Q96L42 1107 aa7.53□□□□□ -1.2
LINC01239-202ENST00000436786 CTTNBP2Q8WZ74 1663 aa7.53□□□□□ -1.2
LINC01239-202ENST00000436786 ABCA8O94911 1581 aa7.52□□□□□ -1.2
LINC01239-202ENST00000436786 P3H3Q8IVL6 736 aa7.52□□□□□ -1.21
LINC01239-202ENST00000436786 ZRANB1Q9UGI0 708 aa7.52□□□□□ -1.21
LINC01239-202ENST00000436786 ADGRL1O94910 1474 aa7.52□□□□□ -1.21
LINC01239-202ENST00000436786 POTEB2H3BUK9 544 aa7.51□□□□□ -1.21
LINC01239-202ENST00000436786 FAM163AQ96GL9 167 aaPredicted RBP7.51□□□□□ -1.21
LINC01239-202ENST00000436786 CD109Q6YHK3 1445 aa7.51□□□□□ -1.21
LINC01239-202ENST00000436786 ARID3CA6NKF2 412 aa7.5□□□□□ -1.21
LINC01239-202ENST00000436786 MAGI3Q5TCQ9 1506 aa7.49□□□□□ -1.21
LINC01239-202ENST00000436786 CSRNP3Q8WYN3 585 aa7.49□□□□□ -1.21
LINC01239-202ENST00000436786 SCUBE2Q9NQ36 999 aa7.49□□□□□ -1.21
LINC01239-202ENST00000436786 FOXD4L1Q9NU39 408 aa7.49□□□□□ -1.21
LINC01239-202ENST00000436786 FAM9AQ8IZU1 332 aaPredicted RBP7.48□□□□□ -1.21
LINC01239-202ENST00000436786 ATP10BO94823 1461 aa7.48□□□□□ -1.21
LINC01239-202ENST00000436786 CFAP43Q8NDM7 1665 aa7.47□□□□□ -1.21
LINC01239-202ENST00000436786 PAK3O75914 559 aaPredicted RBP7.46□□□□□ -1.21
LINC01239-202ENST00000436786 SLC39A7Q92504 469 aa7.46□□□□□ -1.21
LINC01239-202ENST00000436786 RANGAP1P46060 587 aaPredicted RBP7.46□□□□□ -1.22
LINC01239-202ENST00000436786 C7P10643 843 aa7.45□□□□□ -1.22
LINC01239-202ENST00000436786 SAMD9Q5K651 1589 aa7.44□□□□□ -1.22
LINC01239-202ENST00000436786 CDAN1Q8IWY9 1227 aa7.44□□□□□ -1.22
LINC01239-202ENST00000436786 ARAP3Q8WWN8 1544 aa7.44□□□□□ -1.22
LINC01239-202ENST00000436786 GALR2O43603 387 aaPredicted RBP7.44□□□□□ -1.22
LINC01239-202ENST00000436786 ATXN8OSP0DMR3 200 aa7.43□□□□□ -1.22
LINC01239-202ENST00000436786 RAPGEF6Q8TEU7 1601 aa7.43□□□□□ -1.22
LINC01239-202ENST00000436786 ILDR1Q86SU0 546 aaPredicted RBP7.43□□□□□ -1.22
LINC01239-202ENST00000436786 HECW2Q9P2P5 1572 aa7.42□□□□□ -1.22
LINC01239-202ENST00000436786 ABCA9Q8IUA7 1624 aa7.42□□□□□ -1.22
LINC01239-202ENST00000436786 RAPGEF3O95398 923 aa7.42□□□□□ -1.22
LINC01239-202ENST00000436786 EEA1Q15075 1411 aa7.42□□□□□ -1.22
LINC01239-202ENST00000436786 PHLDB1Q86UU1 1377 aa7.41□□□□□ -1.22
LINC01239-202ENST00000436786 FHOD3Q2V2M9 1422 aa7.41□□□□□ -1.22
LINC01239-202ENST00000436786 NUP153P49790 1475 aaKnown RBP7.41□□□□□ -1.22
LINC01239-202ENST00000436786 KIF21BO75037 1637 aa7.41□□□□□ -1.22
LINC01239-202ENST00000436786 METRNQ9UJH8 293 aa7.4□□□□□ -1.22
LINC01239-202ENST00000436786 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
LINC01239-202ENST00000436786 NEO1Q92859 1461 aa7.39□□□□□ -1.23
LINC01239-202ENST00000436786 PLEKHD1A6NEE1 506 aa7.39□□□□□ -1.23
LINC01239-202ENST00000436786 EHMT2Q96KQ7 1210 aa7.37□□□□□ -1.23
LINC01239-202ENST00000436786 FRMPD1Q5SYB0 1578 aa7.37□□□□□ -1.23
LINC01239-202ENST00000436786 PTPRMP28827 1452 aa7.36□□□□□ -1.23
LINC01239-202ENST00000436786 ARID4BQ4LE39 1312 aaPredicted RBP7.36□□□□□ -1.23
LINC01239-202ENST00000436786 ADAMTSL3P82987 1691 aa7.36□□□□□ -1.23
LINC01239-202ENST00000436786 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
LINC01239-202ENST00000436786 AKNAQ7Z591 1439 aa7.36□□□□□ -1.23
LINC01239-202ENST00000436786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC01239-202ENST00000436786 FANCAO15360 1455 aa7.35□□□□□ -1.23
LINC01239-202ENST00000436786 DENND4BO75064 1496 aaPredicted RBP7.35□□□□□ -1.23
LINC01239-202ENST00000436786 UBTFP17480 764 aaKnown RBP7.34□□□□□ -1.23
LINC01239-202ENST00000436786 CDK13Q14004 1512 aaKnown RBP7.34□□□□□ -1.24
LINC01239-202ENST00000436786 TTC37Q6PGP7 1564 aa7.33□□□□□ -1.24
LINC01239-202ENST00000436786 ATP1B4Q9UN42 357 aaPredicted RBP7.33□□□□□ -1.24
LINC01239-202ENST00000436786 BCORL1Q5H9F3 1711 aa7.33□□□□□ -1.24
LINC01239-202ENST00000436786 MMRN1Q13201 1228 aa7.33□□□□□ -1.24
LINC01239-202ENST00000436786 ASTLQ6HA08 431 aaPredicted RBP7.33□□□□□ -1.24
LINC01239-202ENST00000436786 MADDQ8WXG6 1647 aa7.32□□□□□ -1.24
LINC01239-202ENST00000436786 ARHGEF40Q8TER5 1519 aa7.32□□□□□ -1.24
LINC01239-202ENST00000436786 RICTORQ6R327 1708 aa7.32□□□□□ -1.24
LINC01239-202ENST00000436786 CFAP74Q9C0B2 1584 aa7.32□□□□□ -1.24
LINC01239-202ENST00000436786 PELP1Q8IZL8 1130 aaKnown RBP7.32□□□□□ -1.24
LINC01239-202ENST00000436786 PLCH2O75038 1416 aa7.31□□□□□ -1.24
LINC01239-202ENST00000436786 YEATS2Q9ULM3 1422 aa7.31□□□□□ -1.24
LINC01239-202ENST00000436786 SCAPERQ9BY12 1400 aa7.31□□□□□ -1.24
LINC01239-202ENST00000436786 ARHGAP35Q9NRY4 1499 aa7.3□□□□□ -1.24
LINC01239-202ENST00000436786 ZMYM4Q5VZL5 1548 aa7.3□□□□□ -1.24
LINC01239-202ENST00000436786 FMN1Q68DA7 1419 aa7.3□□□□□ -1.24
LINC01239-202ENST00000436786 ZFYVE16Q7Z3T8 1539 aa7.3□□□□□ -1.24
LINC01239-202ENST00000436786 MLECQ14165 292 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 EFCAB2Q5VUJ9 269 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 POGZQ7Z3K3 1410 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 MAGI2Q86UL8 1455 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 LMTK3Q96Q04 1460 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 PCF11O94913 1555 aaKnown RBP7.29□□□□□ -1.24
LINC01239-202ENST00000436786 HECW1Q76N89 1606 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 RIMS1Q86UR5 1692 aaKnown RBP7.29□□□□□ -1.24
LINC01239-202ENST00000436786 CDK11AQ9UQ88 783 aaPredicted RBP7.29□□□□□ -1.24
LINC01239-202ENST00000436786 SIGLEC1Q9BZZ2 1709 aa7.29□□□□□ -1.24
LINC01239-202ENST00000436786 ATMINO43313 823 aaPredicted RBP7.28□□□□□ -1.24
LINC01239-202ENST00000436786 POTEJP0CG39 1038 aa7.28□□□□□ -1.24
LINC01239-202ENST00000436786 HSPA2P54652 639 aa7.28□□□□□ -1.24
LINC01239-202ENST00000436786 MKRN4PQ13434 485 aaPredicted RBP7.28□□□□□ -1.24
LINC01239-202ENST00000436786 FBXO41Q8TF61 875 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms