RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 WRNQ14191 1432 aaPredicted RBP eCLIP15.25■□□□□ 0.03
NIF3L1-208ENST00000436412 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
NIF3L1-208ENST00000436412 ERCC6L2Q5T890 1561 aa15.24■□□□□ 0.03
NIF3L1-208ENST00000436412 ATN1P54259 1190 aaPredicted RBP15.24■□□□□ 0.03
NIF3L1-208ENST00000436412 TIE1P35590 1138 aa15.22■□□□□ 0.03
NIF3L1-208ENST00000436412 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
NIF3L1-208ENST00000436412 SHROOM2Q13796 1616 aa15.21■□□□□ 0.03
NIF3L1-208ENST00000436412 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
NIF3L1-208ENST00000436412 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
NIF3L1-208ENST00000436412 PYGBP11216 843 aa15.2■□□□□ 0.02
NIF3L1-208ENST00000436412 POTEB2H3BUK9 544 aa15.19■□□□□ 0.02
NIF3L1-208ENST00000436412 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
NIF3L1-208ENST00000436412 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
NIF3L1-208ENST00000436412 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
NIF3L1-208ENST00000436412 TTLL13PA6NNM8 815 aa15.15■□□□□ 0.02
NIF3L1-208ENST00000436412 GSE1Q14687 1217 aa15.15■□□□□ 0.02
NIF3L1-208ENST00000436412 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
NIF3L1-208ENST00000436412 METRNQ9UJH8 293 aa15.15■□□□□ 0.02
NIF3L1-208ENST00000436412 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
NIF3L1-208ENST00000436412 JPH4Q96JJ6 628 aa15.13■□□□□ 0.01
NIF3L1-208ENST00000436412 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
NIF3L1-208ENST00000436412 C7P10643 843 aa15.12■□□□□ 0.01
NIF3L1-208ENST00000436412 BIVM-ERCC5R4GMW8 1640 aa15.11■□□□□ 0.01
NIF3L1-208ENST00000436412 ABCC10Q5T3U5 1492 aa15.1■□□□□ 0.01
NIF3L1-208ENST00000436412 FAM69CQ0P6D2 419 aa15.1■□□□□ 0.01
NIF3L1-208ENST00000436412 POTEFA5A3E0 1075 aa15.08■□□□□ 0
NIF3L1-208ENST00000436412 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
NIF3L1-208ENST00000436412 PCDHB8Q9UN66 801 aa15.07■□□□□ 0
NIF3L1-208ENST00000436412 MAPKBP1O60336 1514 aa15.07■□□□□ 0
NIF3L1-208ENST00000436412 POTEJP0CG39 1038 aa15.04■□□□□ -0
NIF3L1-208ENST00000436412 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
NIF3L1-208ENST00000436412 OTUD5Q96G74 571 aa15.03■□□□□ -0
NIF3L1-208ENST00000436412 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
NIF3L1-208ENST00000436412 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
NIF3L1-208ENST00000436412 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
NIF3L1-208ENST00000436412 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
NIF3L1-208ENST00000436412 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
NIF3L1-208ENST00000436412 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
NIF3L1-208ENST00000436412 ADCY10Q96PN6 1610 aa14.97□□□□□ -0.01
NIF3L1-208ENST00000436412 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
NIF3L1-208ENST00000436412 KDM6BO15054 1643 aa14.96□□□□□ -0.01
NIF3L1-208ENST00000436412 KIAA0586Q9BVV6 1533 aa14.96□□□□□ -0.02
NIF3L1-208ENST00000436412 IER5LQ5T953 404 aa14.95□□□□□ -0.02
NIF3L1-208ENST00000436412 ZNF467Q7Z7K2 595 aaPredicted RBP14.95□□□□□ -0.02
NIF3L1-208ENST00000436412 TSPOAP1O95153 1857 aa14.89□□□□□ -0.03
NIF3L1-208ENST00000436412 IGF1RP08069 1367 aa14.89□□□□□ -0.03
NIF3L1-208ENST00000436412 PTPRGP23470 1445 aa14.88□□□□□ -0.03
NIF3L1-208ENST00000436412 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
NIF3L1-208ENST00000436412 IRX5P78411 483 aaPredicted RBP14.86□□□□□ -0.03
NIF3L1-208ENST00000436412 CUL7Q14999 1698 aa14.85□□□□□ -0.03
NIF3L1-208ENST00000436412 SEC24BO95487 1268 aa14.85□□□□□ -0.03
NIF3L1-208ENST00000436412 ILDR1Q86SU0 546 aaPredicted RBP14.85□□□□□ -0.03
NIF3L1-208ENST00000436412 CARMIL2Q6F5E8 1435 aa14.84□□□□□ -0.03
NIF3L1-208ENST00000436412 PLB1Q6P1J6 1458 aa14.84□□□□□ -0.03
NIF3L1-208ENST00000436412 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
NIF3L1-208ENST00000436412 PSEN1P49768 467 aa14.84□□□□□ -0.03
NIF3L1-208ENST00000436412 TNIKQ9UKE5 1360 aa14.84□□□□□ -0.03
NIF3L1-208ENST00000436412 GLI2P10070 1586 aa14.81□□□□□ -0.04
NIF3L1-208ENST00000436412 PDAP1Q13442 181 aaKnown RBP14.8□□□□□ -0.04
NIF3L1-208ENST00000436412 ASXL2Q76L83 1435 aa14.8□□□□□ -0.04
NIF3L1-208ENST00000436412 UHRF1BP1LA0JNW5 1464 aa14.79□□□□□ -0.04
NIF3L1-208ENST00000436412 MAMSTRQ6ZN01 415 aa14.79□□□□□ -0.04
NIF3L1-208ENST00000436412 CARMIL1Q5VZK9 1371 aa14.78□□□□□ -0.04
NIF3L1-208ENST00000436412 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
NIF3L1-208ENST00000436412 ADGRL1O94910 1474 aa14.76□□□□□ -0.05
NIF3L1-208ENST00000436412 UACAQ9BZF9 1416 aa14.75□□□□□ -0.05
NIF3L1-208ENST00000436412 PPRC1Q5VV67 1664 aaKnown RBP14.75□□□□□ -0.05
NIF3L1-208ENST00000436412 PLCG2P16885 1265 aa14.75□□□□□ -0.05
NIF3L1-208ENST00000436412 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
NIF3L1-208ENST00000436412 OCEL1Q9H607 264 aa14.74□□□□□ -0.05
NIF3L1-208ENST00000436412 IQGAP2Q13576 1575 aa14.73□□□□□ -0.05
NIF3L1-208ENST00000436412 SCUBE2Q9NQ36 999 aa14.73□□□□□ -0.05
NIF3L1-208ENST00000436412 TEX14Q8IWB6 1497 aa14.73□□□□□ -0.05
NIF3L1-208ENST00000436412 EPRSP07814 1512 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-208ENST00000436412 PDCD7Q8N8D1 485 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-208ENST00000436412 KDM5BQ9UGL1 1544 aa14.71□□□□□ -0.06
NIF3L1-208ENST00000436412 COL17A1Q9UMD9 1497 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-208ENST00000436412 POTEMA6NI47 508 aa14.69□□□□□ -0.06
NIF3L1-208ENST00000436412 DISP1Q96F81 1524 aa14.68□□□□□ -0.06
NIF3L1-208ENST00000436412 MAP3K4Q9Y6R4 1608 aa14.68□□□□□ -0.06
NIF3L1-208ENST00000436412 MKRN3Q13064 507 aaKnown RBP14.67□□□□□ -0.06
NIF3L1-208ENST00000436412 RIOK3O14730 519 aaKnown RBP14.65□□□□□ -0.06
NIF3L1-208ENST00000436412 GOLGA2Q08379 1002 aa14.65□□□□□ -0.06
NIF3L1-208ENST00000436412 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
NIF3L1-208ENST00000436412 HECW2Q9P2P5 1572 aa14.64□□□□□ -0.07
NIF3L1-208ENST00000436412 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
NIF3L1-208ENST00000436412 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
NIF3L1-208ENST00000436412 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
NIF3L1-208ENST00000436412 PKD2Q13563 968 aa14.61□□□□□ -0.07
NIF3L1-208ENST00000436412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.61□□□□□ -0.07
NIF3L1-208ENST00000436412 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
NIF3L1-208ENST00000436412 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
NIF3L1-208ENST00000436412 KIAA0556O60303 1618 aa14.59□□□□□ -0.07
NIF3L1-208ENST00000436412 MAGI3Q5TCQ9 1506 aa14.58□□□□□ -0.08
NIF3L1-208ENST00000436412 CD109Q6YHK3 1445 aa14.58□□□□□ -0.08
NIF3L1-208ENST00000436412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-208ENST00000436412 LCE2DQ5TA82 110 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-208ENST00000436412 ZFP91Q96JP5 570 aaPredicted RBP14.57□□□□□ -0.08
NIF3L1-208ENST00000436412 VGFO15240 615 aaPredicted RBP14.56□□□□□ -0.08
NIF3L1-208ENST00000436412 DPY19L2Q6NUT2 758 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms