RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PLEKHD1A6NEE1 506 aa12.83□□□□□ -0.36
VPS50-203ENST00000436177 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
VPS50-203ENST00000436177 KIF21BO75037 1637 aa12.82□□□□□ -0.36
VPS50-203ENST00000436177 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
VPS50-203ENST00000436177 NEO1Q92859 1461 aa12.82□□□□□ -0.36
VPS50-203ENST00000436177 POLA2Q14181 598 aa12.81□□□□□ -0.36
VPS50-203ENST00000436177 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
VPS50-203ENST00000436177 RAPGEF3O95398 923 aa12.79□□□□□ -0.36
VPS50-203ENST00000436177 ARID4BQ4LE39 1312 aaPredicted RBP12.79□□□□□ -0.36
VPS50-203ENST00000436177 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
VPS50-203ENST00000436177 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
VPS50-203ENST00000436177 DENND4BO75064 1496 aaPredicted RBP12.75□□□□□ -0.37
VPS50-203ENST00000436177 FMN1Q68DA7 1419 aa12.75□□□□□ -0.37
VPS50-203ENST00000436177 FANCAO15360 1455 aa12.74□□□□□ -0.37
VPS50-203ENST00000436177 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
VPS50-203ENST00000436177 CDK11AQ9UQ88 783 aaPredicted RBP12.73□□□□□ -0.37
VPS50-203ENST00000436177 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
VPS50-203ENST00000436177 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
VPS50-203ENST00000436177 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
VPS50-203ENST00000436177 RBM42Q9BTD8 480 aaKnown RBP12.71□□□□□ -0.37
VPS50-203ENST00000436177 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
VPS50-203ENST00000436177 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS50-203ENST00000436177 ARHGEF40Q8TER5 1519 aa12.7□□□□□ -0.38
VPS50-203ENST00000436177 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
VPS50-203ENST00000436177 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
VPS50-203ENST00000436177 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
VPS50-203ENST00000436177 PTPRMP28827 1452 aa12.68□□□□□ -0.38
VPS50-203ENST00000436177 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
VPS50-203ENST00000436177 CLIP1P30622 1438 aa12.68□□□□□ -0.38
VPS50-203ENST00000436177 ARHGAP35Q9NRY4 1499 aa12.67□□□□□ -0.38
VPS50-203ENST00000436177 EFCAB2Q5VUJ9 269 aa12.66□□□□□ -0.38
VPS50-203ENST00000436177 ZFYVE16Q7Z3T8 1539 aa12.66□□□□□ -0.38
VPS50-203ENST00000436177 PLCH2O75038 1416 aa12.65□□□□□ -0.38
VPS50-203ENST00000436177 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
VPS50-203ENST00000436177 ILDR1Q86SU0 546 aaPredicted RBP12.65□□□□□ -0.38
VPS50-203ENST00000436177 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
VPS50-203ENST00000436177 ADAMTSL3P82987 1691 aa12.64□□□□□ -0.39
VPS50-203ENST00000436177 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
VPS50-203ENST00000436177 KIF14Q15058 1648 aa12.64□□□□□ -0.39
VPS50-203ENST00000436177 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
VPS50-203ENST00000436177 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
VPS50-203ENST00000436177 BCORL1Q5H9F3 1711 aa12.62□□□□□ -0.39
VPS50-203ENST00000436177 RICTORQ6R327 1708 aa12.62□□□□□ -0.39
VPS50-203ENST00000436177 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
VPS50-203ENST00000436177 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
VPS50-203ENST00000436177 ARHGAP5Q13017 1502 aa12.61□□□□□ -0.39
VPS50-203ENST00000436177 MLECQ14165 292 aa12.6□□□□□ -0.39
VPS50-203ENST00000436177 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
VPS50-203ENST00000436177 PCF11O94913 1555 aaKnown RBP12.59□□□□□ -0.39
VPS50-203ENST00000436177 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
VPS50-203ENST00000436177 ZNF518AQ6AHZ1 1483 aa12.59□□□□□ -0.39
VPS50-203ENST00000436177 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
VPS50-203ENST00000436177 C9orf84Q5VXU9 1444 aa12.57□□□□□ -0.4
VPS50-203ENST00000436177 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
VPS50-203ENST00000436177 ATP10AO60312 1499 aa12.57□□□□□ -0.4
VPS50-203ENST00000436177 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
VPS50-203ENST00000436177 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
VPS50-203ENST00000436177 AFAP1Q8N556 730 aa12.53□□□□□ -0.4
VPS50-203ENST00000436177 ZBTB22O15209 634 aa12.52□□□□□ -0.41
VPS50-203ENST00000436177 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
VPS50-203ENST00000436177 ESF1Q9H501 851 aaKnown RBP12.52□□□□□ -0.41
VPS50-203ENST00000436177 HSPA2P54652 639 aa12.51□□□□□ -0.41
VPS50-203ENST00000436177 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
VPS50-203ENST00000436177 KDM5CP41229 1560 aa12.5□□□□□ -0.41
VPS50-203ENST00000436177 FER1L4A9Z1Z3 1794 aa12.5□□□□□ -0.41
VPS50-203ENST00000436177 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
VPS50-203ENST00000436177 ARHGEF12Q9NZN5 1544 aa12.49□□□□□ -0.41
VPS50-203ENST00000436177 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
VPS50-203ENST00000436177 ABCC1P33527 1531 aa12.48□□□□□ -0.41
VPS50-203ENST00000436177 MLH3Q9UHC1 1453 aa12.47□□□□□ -0.41
VPS50-203ENST00000436177 MTUS2Q5JR59 1369 aa12.47□□□□□ -0.41
VPS50-203ENST00000436177 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
VPS50-203ENST00000436177 LRRIQ1Q96JM4 1722 aa12.46□□□□□ -0.41
VPS50-203ENST00000436177 SIGLEC1Q9BZZ2 1709 aa12.46□□□□□ -0.41
VPS50-203ENST00000436177 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
VPS50-203ENST00000436177 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.42
VPS50-203ENST00000436177 CCNB3Q8WWL7 1395 aa12.45□□□□□ -0.42
VPS50-203ENST00000436177 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
VPS50-203ENST00000436177 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
VPS50-203ENST00000436177 REREQ9P2R6 1566 aa12.44□□□□□ -0.42
VPS50-203ENST00000436177 SPAG9O60271 1321 aaKnown RBP12.44□□□□□ -0.42
VPS50-203ENST00000436177 CFDP1Q9UEE9 299 aaPredicted RBP12.44□□□□□ -0.42
VPS50-203ENST00000436177 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
VPS50-203ENST00000436177 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
VPS50-203ENST00000436177 ABCA6Q8N139 1617 aa12.43□□□□□ -0.42
VPS50-203ENST00000436177 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
VPS50-203ENST00000436177 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
VPS50-203ENST00000436177 AGLP35573 1532 aa12.42□□□□□ -0.42
VPS50-203ENST00000436177 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
VPS50-203ENST00000436177 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
VPS50-203ENST00000436177 GPATCH8Q9UKJ3 1502 aaKnown RBP12.41□□□□□ -0.42
VPS50-203ENST00000436177 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.42
VPS50-203ENST00000436177 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
VPS50-203ENST00000436177 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
VPS50-203ENST00000436177 SAMD9LQ8IVG5 1584 aa12.39□□□□□ -0.43
VPS50-203ENST00000436177 KIAA1107Q9UPP5 1409 aa12.39□□□□□ -0.43
VPS50-203ENST00000436177 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
VPS50-203ENST00000436177 EHBP1L1Q8N3D4 1523 aa12.37□□□□□ -0.43
VPS50-203ENST00000436177 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
VPS50-203ENST00000436177 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms