RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
HLA-F-220ENST00000434407 EFCAB2Q5VUJ9 269 aa29.08■■■□□ 2.25
HLA-F-220ENST00000434407 FRMPD1Q5SYB0 1578 aa29.05■■■□□ 2.24
HLA-F-220ENST00000434407 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
HLA-F-220ENST00000434407 RICTORQ6R327 1708 aa29.03■■■□□ 2.24
HLA-F-220ENST00000434407 GPATCH8Q9UKJ3 1502 aaKnown RBP29.03■■■□□ 2.24
HLA-F-220ENST00000434407 DENND4BO75064 1496 aaPredicted RBP29.03■■■□□ 2.24
HLA-F-220ENST00000434407 RAPGEF3O95398 923 aa29.02■■■□□ 2.24
HLA-F-220ENST00000434407 LRRC9Q6ZRR7 1453 aa29.02■■■□□ 2.24
HLA-F-220ENST00000434407 ADGRL1O94910 1474 aa29.01■■■□□ 2.23
HLA-F-220ENST00000434407 SUPT6HQ7KZ85 1726 aaKnown RBP28.99■■■□□ 2.23
HLA-F-220ENST00000434407 SCAPERQ9BY12 1400 aa28.98■■■□□ 2.23
HLA-F-220ENST00000434407 CCNB3Q8WWL7 1395 aa28.97■■■□□ 2.23
HLA-F-220ENST00000434407 NCOA2Q15596 1464 aa28.94■■■□□ 2.22
HLA-F-220ENST00000434407 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
HLA-F-220ENST00000434407 POGZQ7Z3K3 1410 aa28.94■■■□□ 2.22
HLA-F-220ENST00000434407 ZMYM4Q5VZL5 1548 aa28.93■■■□□ 2.22
HLA-F-220ENST00000434407 ABCC1P33527 1531 aa28.91■■■□□ 2.22
HLA-F-220ENST00000434407 ITSN2Q9NZM3 1697 aa28.91■■■□□ 2.22
HLA-F-220ENST00000434407 SAMD9LQ8IVG5 1584 aa28.88■■■□□ 2.21
HLA-F-220ENST00000434407 APLP2Q06481 763 aa28.88■■■□□ 2.21
HLA-F-220ENST00000434407 CFDP1Q9UEE9 299 aaPredicted RBP28.88■■■□□ 2.21
HLA-F-220ENST00000434407 ARHGEF12Q9NZN5 1544 aa28.88■■■□□ 2.21
HLA-F-220ENST00000434407 ZNF518AQ6AHZ1 1483 aa28.85■■■□□ 2.21
HLA-F-220ENST00000434407 MAGI2Q86UL8 1455 aa28.85■■■□□ 2.21
HLA-F-220ENST00000434407 KDM5CP41229 1560 aa28.85■■■□□ 2.21
HLA-F-220ENST00000434407 FOXD1Q16676 465 aa28.83■■■□□ 2.21
HLA-F-220ENST00000434407 KIAA1107Q9UPP5 1409 aa28.83■■■□□ 2.21
HLA-F-220ENST00000434407 PLEKHH2Q8IVE3 1493 aa28.82■■■□□ 2.2
HLA-F-220ENST00000434407 ARHGEF40Q8TER5 1519 aa28.82■■■□□ 2.2
HLA-F-220ENST00000434407 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
HLA-F-220ENST00000434407 AFAP1Q8N556 730 aa28.8■■■□□ 2.2
HLA-F-220ENST00000434407 ZNF777Q9ULD5 760 aaPredicted RBP28.8■■■□□ 2.2
HLA-F-220ENST00000434407 SYCP2Q9BX26 1530 aa28.79■■■□□ 2.2
HLA-F-220ENST00000434407 ZFYVE16Q7Z3T8 1539 aa28.78■■■□□ 2.2
HLA-F-220ENST00000434407 YEATS2Q9ULM3 1422 aa28.76■■■□□ 2.19
HLA-F-220ENST00000434407 ZNF644Q9H582 1327 aaPredicted RBP28.74■■■□□ 2.19
HLA-F-220ENST00000434407 MLH3Q9UHC1 1453 aa28.74■■■□□ 2.19
HLA-F-220ENST00000434407 HECW2Q9P2P5 1572 aa28.73■■■□□ 2.19
HLA-F-220ENST00000434407 MYOM3Q5VTT5 1437 aa28.72■■■□□ 2.19
HLA-F-220ENST00000434407 KDM4FA0A1W2PPD8 638 aa28.72■■■□□ 2.19
HLA-F-220ENST00000434407 HNRNPMP52272 730 aaKnown RBP eCLIP28.72■■■□□ 2.19
HLA-F-220ENST00000434407 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
HLA-F-220ENST00000434407 MIA2Q96PC5 1412 aa28.69■■■□□ 2.18
HLA-F-220ENST00000434407 CAMSAP2Q08AD1 1489 aa28.69■■■□□ 2.18
HLA-F-220ENST00000434407 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
HLA-F-220ENST00000434407 ATP10AO60312 1499 aa28.67■■■□□ 2.18
HLA-F-220ENST00000434407 SIGLEC1Q9BZZ2 1709 aa28.65■■■□□ 2.18
HLA-F-220ENST00000434407 DIP2CQ9Y2E4 1556 aa28.64■■■□□ 2.18
HLA-F-220ENST00000434407 ABCA6Q8N139 1617 aa28.63■■■□□ 2.17
HLA-F-220ENST00000434407 C9orf84Q5VXU9 1444 aa28.62■■■□□ 2.17
HLA-F-220ENST00000434407 RSPH4AQ5TD94 716 aa28.61■■■□□ 2.17
HLA-F-220ENST00000434407 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
HLA-F-220ENST00000434407 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
HLA-F-220ENST00000434407 INO80Q9ULG1 1556 aaPredicted RBP28.61■■■□□ 2.17
HLA-F-220ENST00000434407 SPAG9O60271 1321 aaKnown RBP28.61■■■□□ 2.17
HLA-F-220ENST00000434407 BCORL1Q5H9F3 1711 aa28.59■■■□□ 2.17
HLA-F-220ENST00000434407 CCDC141Q6ZP82 1450 aa28.58■■■□□ 2.17
HLA-F-220ENST00000434407 ATP7AQ04656 1500 aa28.58■■■□□ 2.17
HLA-F-220ENST00000434407 ADAMTSL3P82987 1691 aa28.57■■■□□ 2.16
HLA-F-220ENST00000434407 FGD6Q6ZV73 1430 aa28.56■■■□□ 2.16
HLA-F-220ENST00000434407 PTPN23Q9H3S7 1636 aa28.55■■■□□ 2.16
HLA-F-220ENST00000434407 RTEL1-TNFRSF6BF6WH68 1400 aa28.55■■■□□ 2.16
HLA-F-220ENST00000434407 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
HLA-F-220ENST00000434407 TCOF1Q13428 1488 aaKnown RBP28.53■■■□□ 2.16
HLA-F-220ENST00000434407 ARID4BQ4LE39 1312 aaPredicted RBP28.53■■■□□ 2.16
HLA-F-220ENST00000434407 AGLP35573 1532 aa28.5■■■□□ 2.15
HLA-F-220ENST00000434407 MAST1Q9Y2H9 1570 aa28.46■■■□□ 2.15
HLA-F-220ENST00000434407 ADGBQ8N7X0 1667 aa28.46■■■□□ 2.15
HLA-F-220ENST00000434407 PLXNC1O60486 1568 aa28.45■■■□□ 2.15
HLA-F-220ENST00000434407 MADDQ8WXG6 1647 aa28.43■■■□□ 2.14
HLA-F-220ENST00000434407 TSPY4P0CV99 314 aa28.43■■■□□ 2.14
HLA-F-220ENST00000434407 TSPY10P0CW01 314 aa28.43■■■□□ 2.14
HLA-F-220ENST00000434407 A2MP01023 1474 aa28.42■■■□□ 2.14
HLA-F-220ENST00000434407 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
HLA-F-220ENST00000434407 CROCC2H7BZ55 1655 aa28.4■■■□□ 2.14
HLA-F-220ENST00000434407 ABCC5O15440 1437 aa28.4■■■□□ 2.14
HLA-F-220ENST00000434407 SHANK2Q9UPX8 1470 aa28.39■■■□□ 2.13
HLA-F-220ENST00000434407 PPARGC1BQ86YN6 1023 aaKnown RBP28.38■■■□□ 2.13
HLA-F-220ENST00000434407 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
HLA-F-220ENST00000434407 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
HLA-F-220ENST00000434407 DAPK1P53355 1430 aa28.36■■■□□ 2.13
HLA-F-220ENST00000434407 MLECQ14165 292 aa28.36■■■□□ 2.13
HLA-F-220ENST00000434407 PTPRMP28827 1452 aa28.35■■■□□ 2.13
HLA-F-220ENST00000434407 RIMS1Q86UR5 1692 aaKnown RBP28.34■■■□□ 2.13
HLA-F-220ENST00000434407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.28■■■□□ 2.12
HLA-F-220ENST00000434407 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
HLA-F-220ENST00000434407 RRBP1Q9P2E9 1410 aaKnown RBP28.23■■■□□ 2.11
HLA-F-220ENST00000434407 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
HLA-F-220ENST00000434407 ADGRL2O95490 1459 aa28.22■■■□□ 2.11
HLA-F-220ENST00000434407 PPP6R1Q9UPN7 881 aa28.21■■■□□ 2.11
HLA-F-220ENST00000434407 NCOA1Q15788 1441 aa28.2■■■□□ 2.11
HLA-F-220ENST00000434407 EIF2AK4Q9P2K8 1649 aaKnown RBP28.2■■■□□ 2.1
HLA-F-220ENST00000434407 KIF15Q9NS87 1388 aa28.2■■■□□ 2.1
HLA-F-220ENST00000434407 CNTLNQ9NXG0 1405 aa28.19■■■□□ 2.1
HLA-F-220ENST00000434407 ANKRD30AQ9BXX3 1397 aa28.19■■■□□ 2.1
HLA-F-220ENST00000434407 PTPRKQ15262 1439 aa28.18■■■□□ 2.1
HLA-F-220ENST00000434407 KIF3BO15066 747 aa28.18■■■□□ 2.1
HLA-F-220ENST00000434407 MROH2AA6NES4 1674 aa28.17■■■□□ 2.1
HLA-F-220ENST00000434407 GGT6Q6P531 493 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms