RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 ARHGEF40Q8TER5 1519 aa32.36■■■□□ 2.77
APOE-203ENST00000434152 POGZQ7Z3K3 1410 aa32.35■■■□□ 2.77
APOE-203ENST00000434152 YEATS2Q9ULM3 1422 aa32.35■■■□□ 2.77
APOE-203ENST00000434152 ZMYM4Q5VZL5 1548 aa32.35■■■□□ 2.77
APOE-203ENST00000434152 MAGI2Q86UL8 1455 aa32.34■■■□□ 2.77
APOE-203ENST00000434152 HECW2Q9P2P5 1572 aa32.32■■■□□ 2.77
APOE-203ENST00000434152 MYO5CQ9NQX4 1742 aa32.32■■■□□ 2.76
APOE-203ENST00000434152 PTPRMP28827 1452 aa32.32■■■□□ 2.76
APOE-203ENST00000434152 ZFYVE16Q7Z3T8 1539 aa32.31■■■□□ 2.76
APOE-203ENST00000434152 VPS8Q8N3P4 1428 aa32.3■■■□□ 2.76
APOE-203ENST00000434152 BCORL1Q5H9F3 1711 aa32.29■■■□□ 2.76
APOE-203ENST00000434152 ARHGAP5Q13017 1502 aa32.29■■■□□ 2.76
APOE-203ENST00000434152 AFAP1Q8N556 730 aa32.28■■■□□ 2.76
APOE-203ENST00000434152 MADDQ8WXG6 1647 aa32.21■■■□□ 2.75
APOE-203ENST00000434152 MLECQ14165 292 aa32.2■■■□□ 2.75
APOE-203ENST00000434152 ATP10AO60312 1499 aa32.19■■■□□ 2.74
APOE-203ENST00000434152 ZNF518AQ6AHZ1 1483 aa32.18■■■□□ 2.74
APOE-203ENST00000434152 MYT1LQ9UL68 1186 aa32.16■■■□□ 2.74
APOE-203ENST00000434152 SIGLEC1Q9BZZ2 1709 aa32.16■■■□□ 2.74
APOE-203ENST00000434152 CDC42BPBQ9Y5S2 1711 aa32.16■■■□□ 2.74
APOE-203ENST00000434152 MAP3K1Q13233 1512 aa32.12■■■□□ 2.73
APOE-203ENST00000434152 C9orf84Q5VXU9 1444 aa32.12■■■□□ 2.73
APOE-203ENST00000434152 ARHGEF12Q9NZN5 1544 aa32.11■■■□□ 2.73
APOE-203ENST00000434152 PLPPR3Q6T4P5 718 aa32.11■■■□□ 2.73
APOE-203ENST00000434152 PREX2Q70Z35 1606 aa32.11■■■□□ 2.73
APOE-203ENST00000434152 TRAPPC8Q9Y2L5 1435 aa32.1■■■□□ 2.73
APOE-203ENST00000434152 ZNF777Q9ULD5 760 aaPredicted RBP32.1■■■□□ 2.73
APOE-203ENST00000434152 KDM5CP41229 1560 aa32.1■■■□□ 2.73
APOE-203ENST00000434152 TIAM1Q13009 1591 aa32.1■■■□□ 2.73
APOE-203ENST00000434152 EHBP1L1Q8N3D4 1523 aa32.09■■■□□ 2.73
APOE-203ENST00000434152 MTUS2Q5JR59 1369 aa32.08■■■□□ 2.73
APOE-203ENST00000434152 RIMS1Q86UR5 1692 aaKnown RBP32.08■■■□□ 2.73
APOE-203ENST00000434152 GPATCH8Q9UKJ3 1502 aaKnown RBP32.06■■■□□ 2.72
APOE-203ENST00000434152 ABCC1P33527 1531 aa32.05■■■□□ 2.72
APOE-203ENST00000434152 MLH3Q9UHC1 1453 aa32.05■■■□□ 2.72
APOE-203ENST00000434152 CDC42BPAQ5VT25 1732 aa32.03■■■□□ 2.72
APOE-203ENST00000434152 CFDP1Q9UEE9 299 aaPredicted RBP32.01■■■□□ 2.71
APOE-203ENST00000434152 HNRNPMP52272 730 aaKnown RBP eCLIP32■■■□□ 2.71
APOE-203ENST00000434152 CCNB3Q8WWL7 1395 aa31.99■■■□□ 2.71
APOE-203ENST00000434152 DIP2CQ9Y2E4 1556 aa31.97■■■□□ 2.71
APOE-203ENST00000434152 LMTK3Q96Q04 1460 aa31.97■■■□□ 2.71
APOE-203ENST00000434152 ILDR1Q86SU0 546 aaPredicted RBP31.95■■■□□ 2.71
APOE-203ENST00000434152 LRRC9Q6ZRR7 1453 aa31.95■■■□□ 2.7
APOE-203ENST00000434152 ITSN2Q9NZM3 1697 aa31.95■■■□□ 2.7
APOE-203ENST00000434152 SUPT6HQ7KZ85 1726 aaKnown RBP31.95■■■□□ 2.7
APOE-203ENST00000434152 SAMD9LQ8IVG5 1584 aa31.94■■■□□ 2.7
APOE-203ENST00000434152 CEBPAP49715 358 aaPredicted RBP31.93■■■□□ 2.7
APOE-203ENST00000434152 ABCA6Q8N139 1617 aa31.91■■■□□ 2.7
APOE-203ENST00000434152 FER1L4A9Z1Z3 1794 aa31.9■■■□□ 2.7
APOE-203ENST00000434152 HSPA2P54652 639 aa31.9■■■□□ 2.7
APOE-203ENST00000434152 SPAG9O60271 1321 aaKnown RBP31.9■■■□□ 2.7
APOE-203ENST00000434152 KIAA1107Q9UPP5 1409 aa31.9■■■□□ 2.7
APOE-203ENST00000434152 REREQ9P2R6 1566 aa31.9■■■□□ 2.7
APOE-203ENST00000434152 SYCP2Q9BX26 1530 aa31.89■■■□□ 2.7
APOE-203ENST00000434152 APLP2Q06481 763 aa31.88■■■□□ 2.69
APOE-203ENST00000434152 ZNF644Q9H582 1327 aaPredicted RBP31.86■■■□□ 2.69
APOE-203ENST00000434152 KIDINS220Q9ULH0 1771 aa31.86■■■□□ 2.69
APOE-203ENST00000434152 NCOA2Q15596 1464 aa31.85■■■□□ 2.69
APOE-203ENST00000434152 PLEKHH2Q8IVE3 1493 aa31.85■■■□□ 2.69
APOE-203ENST00000434152 AGLP35573 1532 aa31.85■■■□□ 2.69
APOE-203ENST00000434152 KANK4Q5T7N3 995 aaPredicted RBP31.8■■■□□ 2.68
APOE-203ENST00000434152 ESF1Q9H501 851 aaKnown RBP31.79■■■□□ 2.68
APOE-203ENST00000434152 MBD5Q9P267 1494 aa31.73■■■□□ 2.67
APOE-203ENST00000434152 ATP7AQ04656 1500 aa31.72■■■□□ 2.67
APOE-203ENST00000434152 A2MP01023 1474 aa31.67■■■□□ 2.66
APOE-203ENST00000434152 INO80Q9ULG1 1556 aaPredicted RBP31.66■■■□□ 2.66
APOE-203ENST00000434152 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
APOE-203ENST00000434152 MYOM3Q5VTT5 1437 aa31.63■■■□□ 2.65
APOE-203ENST00000434152 MIA2Q96PC5 1412 aa31.63■■■□□ 2.65
APOE-203ENST00000434152 UHRF1BP1Q6BDS2 1440 aa31.62■■■□□ 2.65
APOE-203ENST00000434152 GGT6Q6P531 493 aa31.62■■■□□ 2.65
APOE-203ENST00000434152 PREX1Q8TCU6 1659 aa31.61■■■□□ 2.65
APOE-203ENST00000434152 RTEL1-TNFRSF6BF6WH68 1400 aa31.61■■■□□ 2.65
APOE-203ENST00000434152 RSPH4AQ5TD94 716 aa31.61■■■□□ 2.65
APOE-203ENST00000434152 ZMYM3Q14202 1370 aa31.6■■■□□ 2.65
APOE-203ENST00000434152 SETD1BQ9UPS6 1966 aaKnown RBP31.6■■■□□ 2.65
APOE-203ENST00000434152 C3P01024 1663 aa31.6■■■□□ 2.65
APOE-203ENST00000434152 PLXNC1O60486 1568 aa31.59■■■□□ 2.65
APOE-203ENST00000434152 FBXO41Q8TF61 875 aa31.57■■■□□ 2.64
APOE-203ENST00000434152 CAMSAP2Q08AD1 1489 aa31.57■■■□□ 2.64
APOE-203ENST00000434152 DHX29Q7Z478 1369 aaKnown RBP31.55■■■□□ 2.64
APOE-203ENST00000434152 CCDC141Q6ZP82 1450 aa31.53■■■□□ 2.64
APOE-203ENST00000434152 PPP6R1Q9UPN7 881 aa31.53■■■□□ 2.64
APOE-203ENST00000434152 ARHGEF5Q12774 1597 aa31.51■■■□□ 2.64
APOE-203ENST00000434152 TSPY4P0CV99 314 aa31.5■■■□□ 2.63
APOE-203ENST00000434152 TSPY10P0CW01 314 aa31.5■■■□□ 2.63
APOE-203ENST00000434152 ADGBQ8N7X0 1667 aa31.49■■■□□ 2.63
APOE-203ENST00000434152 DMRT2Q9Y5R5 561 aa31.49■■■□□ 2.63
APOE-203ENST00000434152 NPATQ14207 1427 aa31.48■■■□□ 2.63
APOE-203ENST00000434152 KIF3BO15066 747 aa31.47■■■□□ 2.63
APOE-203ENST00000434152 MROH2AA6NES4 1674 aa31.44■■■□□ 2.62
APOE-203ENST00000434152 FGD6Q6ZV73 1430 aa31.44■■■□□ 2.62
APOE-203ENST00000434152 PTPN23Q9H3S7 1636 aa31.43■■■□□ 2.62
APOE-203ENST00000434152 CLTCQ00610 1675 aaKnown RBP31.42■■■□□ 2.62
APOE-203ENST00000434152 TCOF1Q13428 1488 aaKnown RBP31.41■■■□□ 2.62
APOE-203ENST00000434152 STRCQ7RTU9 1775 aa31.41■■■□□ 2.62
APOE-203ENST00000434152 CERKQ8TCT0 537 aa31.41■■■□□ 2.62
APOE-203ENST00000434152 PTPRKQ15262 1439 aa31.4■■■□□ 2.62
APOE-203ENST00000434152 MAST1Q9Y2H9 1570 aa31.35■■■□□ 2.61
APOE-203ENST00000434152 PTPRTO14522 1441 aa31.32■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms