RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CD109Q6YHK3 1445 aa9.22□□□□□ -0.93
HMGB3P24-201ENST00000433260 HECW1Q76N89 1606 aa9.21□□□□□ -0.93
HMGB3P24-201ENST00000433260 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
HMGB3P24-201ENST00000433260 CEP162Q5TB80 1403 aa9.21□□□□□ -0.94
HMGB3P24-201ENST00000433260 KDM6BO15054 1643 aa9.2□□□□□ -0.94
HMGB3P24-201ENST00000433260 CFAP43Q8NDM7 1665 aa9.2□□□□□ -0.94
HMGB3P24-201ENST00000433260 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
HMGB3P24-201ENST00000433260 PCF11O94913 1555 aaKnown RBP9.19□□□□□ -0.94
HMGB3P24-201ENST00000433260 CASKIN1Q8WXD9 1431 aa9.18□□□□□ -0.94
HMGB3P24-201ENST00000433260 ABCA9Q8IUA7 1624 aa9.16□□□□□ -0.94
HMGB3P24-201ENST00000433260 TEX14Q8IWB6 1497 aa9.16□□□□□ -0.94
HMGB3P24-201ENST00000433260 COL17A1Q9UMD9 1497 aaPredicted RBP9.16□□□□□ -0.94
HMGB3P24-201ENST00000433260 MAGI3Q5TCQ9 1506 aa9.15□□□□□ -0.95
HMGB3P24-201ENST00000433260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.95
HMGB3P24-201ENST00000433260 KIF14Q15058 1648 aa9.13□□□□□ -0.95
HMGB3P24-201ENST00000433260 TTC37Q6PGP7 1564 aa9.13□□□□□ -0.95
HMGB3P24-201ENST00000433260 RAPGEF3O95398 923 aa9.13□□□□□ -0.95
HMGB3P24-201ENST00000433260 FYCO1Q9BQS8 1478 aa9.13□□□□□ -0.95
HMGB3P24-201ENST00000433260 CCDC18Q5T9S5 1454 aa9.12□□□□□ -0.95
HMGB3P24-201ENST00000433260 TROQ12816 1431 aaPredicted RBP9.12□□□□□ -0.95
HMGB3P24-201ENST00000433260 ZNF777Q9ULD5 760 aaPredicted RBP9.11□□□□□ -0.95
HMGB3P24-201ENST00000433260 EFCAB2Q5VUJ9 269 aa9.1□□□□□ -0.95
HMGB3P24-201ENST00000433260 AKNAQ7Z591 1439 aa9.1□□□□□ -0.95
HMGB3P24-201ENST00000433260 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
HMGB3P24-201ENST00000433260 FANCAO15360 1455 aa9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 PLCH2O75038 1416 aa9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 POLA2Q14181 598 aa9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 MYT1LQ9UL68 1186 aa9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 MTUS2Q5JR59 1369 aa9.09□□□□□ -0.95
HMGB3P24-201ENST00000433260 VPS8Q8N3P4 1428 aa9.08□□□□□ -0.96
HMGB3P24-201ENST00000433260 CDC42BPBQ9Y5S2 1711 aa9.08□□□□□ -0.96
HMGB3P24-201ENST00000433260 NEO1Q92859 1461 aa9.08□□□□□ -0.96
HMGB3P24-201ENST00000433260 ARHGAP5Q13017 1502 aa9.07□□□□□ -0.96
HMGB3P24-201ENST00000433260 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
HMGB3P24-201ENST00000433260 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
HMGB3P24-201ENST00000433260 PHLDB1Q86UU1 1377 aa9.07□□□□□ -0.96
HMGB3P24-201ENST00000433260 SCAPERQ9BY12 1400 aa9.06□□□□□ -0.96
HMGB3P24-201ENST00000433260 AFAP1Q8N556 730 aa9.06□□□□□ -0.96
HMGB3P24-201ENST00000433260 CDC42BPAQ5VT25 1732 aa9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 DENND4BO75064 1496 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 HNRNPMP52272 730 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 CFDP1Q9UEE9 299 aaPredicted RBP9.05□□□□□ -0.96
HMGB3P24-201ENST00000433260 CFAP74Q9C0B2 1584 aa9.04□□□□□ -0.96
HMGB3P24-201ENST00000433260 KDM4FA0A1W2PPD8 638 aa9.04□□□□□ -0.96
HMGB3P24-201ENST00000433260 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
HMGB3P24-201ENST00000433260 TIAM1Q13009 1591 aa9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 ABCB7O75027 752 aa9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 PPARGC1BQ86YN6 1023 aaKnown RBP9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 GPATCH8Q9UKJ3 1502 aaKnown RBP9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 ZNF644Q9H582 1327 aaPredicted RBP9.03□□□□□ -0.96
HMGB3P24-201ENST00000433260 RICTORQ6R327 1708 aa9.02□□□□□ -0.96
HMGB3P24-201ENST00000433260 PREX2Q70Z35 1606 aa9.02□□□□□ -0.96
HMGB3P24-201ENST00000433260 FKBP8Q14318 412 aa9.02□□□□□ -0.97
HMGB3P24-201ENST00000433260 EHBP1L1Q8N3D4 1523 aa9.01□□□□□ -0.97
HMGB3P24-201ENST00000433260 FRMPD1Q5SYB0 1578 aa9.01□□□□□ -0.97
HMGB3P24-201ENST00000433260 SUPT6HQ7KZ85 1726 aaKnown RBP9.01□□□□□ -0.97
HMGB3P24-201ENST00000433260 LRRC9Q6ZRR7 1453 aa9.01□□□□□ -0.97
HMGB3P24-201ENST00000433260 MLECQ14165 292 aa9□□□□□ -0.97
HMGB3P24-201ENST00000433260 NCOA2Q15596 1464 aa9□□□□□ -0.97
HMGB3P24-201ENST00000433260 ARHGEF12Q9NZN5 1544 aa9□□□□□ -0.97
HMGB3P24-201ENST00000433260 SAMD9LQ8IVG5 1584 aa8.99□□□□□ -0.97
HMGB3P24-201ENST00000433260 YEATS2Q9ULM3 1422 aa8.98□□□□□ -0.97
HMGB3P24-201ENST00000433260 TRAPPC8Q9Y2L5 1435 aa8.98□□□□□ -0.97
HMGB3P24-201ENST00000433260 ITSN2Q9NZM3 1697 aa8.98□□□□□ -0.97
HMGB3P24-201ENST00000433260 DSG3P32926 999 aa8.98□□□□□ -0.97
HMGB3P24-201ENST00000433260 POGZQ7Z3K3 1410 aa8.97□□□□□ -0.97
HMGB3P24-201ENST00000433260 ABCC1P33527 1531 aa8.96□□□□□ -0.97
HMGB3P24-201ENST00000433260 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
HMGB3P24-201ENST00000433260 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
HMGB3P24-201ENST00000433260 ZNF518AQ6AHZ1 1483 aa8.96□□□□□ -0.98
HMGB3P24-201ENST00000433260 SYCP2Q9BX26 1530 aa8.95□□□□□ -0.98
HMGB3P24-201ENST00000433260 SPAG9O60271 1321 aaKnown RBP8.95□□□□□ -0.98
HMGB3P24-201ENST00000433260 ATP10AO60312 1499 aa8.95□□□□□ -0.98
HMGB3P24-201ENST00000433260 MAGI2Q86UL8 1455 aa8.94□□□□□ -0.98
HMGB3P24-201ENST00000433260 ZMYM4Q5VZL5 1548 aa8.94□□□□□ -0.98
HMGB3P24-201ENST00000433260 SIGLEC1Q9BZZ2 1709 aa8.94□□□□□ -0.98
HMGB3P24-201ENST00000433260 KIDINS220Q9ULH0 1771 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 KDM5CP41229 1560 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 HECW2Q9P2P5 1572 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 ARHGEF40Q8TER5 1519 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 CAMSAP2Q08AD1 1489 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 PLEKHH2Q8IVE3 1493 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 KIAA1107Q9UPP5 1409 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 TSPY4P0CV99 314 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 TSPY10P0CW01 314 aa8.92□□□□□ -0.98
HMGB3P24-201ENST00000433260 BCORL1Q5H9F3 1711 aa8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 ABCA6Q8N139 1617 aa8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 MLH3Q9UHC1 1453 aa8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 MYOM3Q5VTT5 1437 aa8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 FAM50AQ14320 339 aaKnown RBP8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 RSPH4AQ5TD94 716 aa8.91□□□□□ -0.98
HMGB3P24-201ENST00000433260 DIP2CQ9Y2E4 1556 aa8.9□□□□□ -0.98
HMGB3P24-201ENST00000433260 MBD5Q9P267 1494 aa8.9□□□□□ -0.98
HMGB3P24-201ENST00000433260 C9orf84Q5VXU9 1444 aa8.9□□□□□ -0.98
HMGB3P24-201ENST00000433260 MKRN4PQ13434 485 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P24-201ENST00000433260 ADAMTSL3P82987 1691 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms