RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 CENPBP07199 599 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-212ENST00000432645 UACAQ9BZF9 1416 aa12□□□□□ -0.49
HDAC9-212ENST00000432645 GTF3C3Q9Y5Q9 886 aa12□□□□□ -0.49
HDAC9-212ENST00000432645 ATP10BO94823 1461 aa12□□□□□ -0.49
HDAC9-212ENST00000432645 MIER1Q8N108 512 aa12□□□□□ -0.49
HDAC9-212ENST00000432645 KIF14Q15058 1648 aa11.99□□□□□ -0.49
HDAC9-212ENST00000432645 ABCA8O94911 1581 aa11.98□□□□□ -0.49
HDAC9-212ENST00000432645 DAPK1P53355 1430 aa11.98□□□□□ -0.49
HDAC9-212ENST00000432645 ABCC5O15440 1437 aa11.97□□□□□ -0.49
HDAC9-212ENST00000432645 GPATCH8Q9UKJ3 1502 aaKnown RBP11.97□□□□□ -0.49
HDAC9-212ENST00000432645 KDM6BO15054 1643 aa11.96□□□□□ -0.49
HDAC9-212ENST00000432645 ERCC6L2Q5T890 1561 aa11.96□□□□□ -0.5
HDAC9-212ENST00000432645 FOXD1Q16676 465 aa11.95□□□□□ -0.5
HDAC9-212ENST00000432645 CAMSAP2Q08AD1 1489 aa11.94□□□□□ -0.5
HDAC9-212ENST00000432645 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
HDAC9-212ENST00000432645 YTHDC1Q96MU7 727 aaKnown RBP11.93□□□□□ -0.5
HDAC9-212ENST00000432645 HIRIP3Q9BW71 556 aaPredicted RBP11.93□□□□□ -0.5
HDAC9-212ENST00000432645 PPP1R15AO75807 674 aaPredicted RBP11.93□□□□□ -0.5
HDAC9-212ENST00000432645 MPHOSPH9Q99550 1183 aa11.93□□□□□ -0.5
HDAC9-212ENST00000432645 DNMT1P26358 1616 aaKnown RBP11.92□□□□□ -0.5
HDAC9-212ENST00000432645 AKNAQ7Z591 1439 aa11.92□□□□□ -0.5
HDAC9-212ENST00000432645 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
HDAC9-212ENST00000432645 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
HDAC9-212ENST00000432645 KCNH8Q96L42 1107 aa11.9□□□□□ -0.5
HDAC9-212ENST00000432645 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
HDAC9-212ENST00000432645 HNRNPMP52272 730 aaKnown RBP eCLIP11.9□□□□□ -0.5
HDAC9-212ENST00000432645 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
HDAC9-212ENST00000432645 DENND4BO75064 1496 aaPredicted RBP11.9□□□□□ -0.51
HDAC9-212ENST00000432645 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
HDAC9-212ENST00000432645 ABCC10Q5T3U5 1492 aa11.89□□□□□ -0.51
HDAC9-212ENST00000432645 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
HDAC9-212ENST00000432645 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
HDAC9-212ENST00000432645 NCOA1Q15788 1441 aa11.88□□□□□ -0.51
HDAC9-212ENST00000432645 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
HDAC9-212ENST00000432645 TSPY4P0CV99 314 aa11.86□□□□□ -0.51
HDAC9-212ENST00000432645 TSPY10P0CW01 314 aa11.86□□□□□ -0.51
HDAC9-212ENST00000432645 CLASP1Q7Z460 1538 aa11.85□□□□□ -0.51
HDAC9-212ENST00000432645 ANKRD30AQ9BXX3 1397 aa11.84□□□□□ -0.51
HDAC9-212ENST00000432645 ABCC2Q92887 1545 aa11.84□□□□□ -0.51
HDAC9-212ENST00000432645 DDX10Q13206 875 aaKnown RBP11.83□□□□□ -0.52
HDAC9-212ENST00000432645 C9orf84Q5VXU9 1444 aa11.82□□□□□ -0.52
HDAC9-212ENST00000432645 L3MBTL2Q969R5 705 aa11.81□□□□□ -0.52
HDAC9-212ENST00000432645 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
HDAC9-212ENST00000432645 ANKRD30BQ9BXX2 1392 aa11.8□□□□□ -0.52
HDAC9-212ENST00000432645 ADGRL2O95490 1459 aa11.8□□□□□ -0.52
HDAC9-212ENST00000432645 PKD2Q13563 968 aa11.79□□□□□ -0.52
HDAC9-212ENST00000432645 TTC37Q6PGP7 1564 aa11.79□□□□□ -0.52
HDAC9-212ENST00000432645 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
HDAC9-212ENST00000432645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC9-212ENST00000432645 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
HDAC9-212ENST00000432645 CROCC2H7BZ55 1655 aa11.79□□□□□ -0.52
HDAC9-212ENST00000432645 KIF15Q9NS87 1388 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 KDM5BQ9UGL1 1544 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 PZPP20742 1482 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 NUP155O75694 1391 aa11.78□□□□□ -0.52
HDAC9-212ENST00000432645 PREX2Q70Z35 1606 aa11.76□□□□□ -0.53
HDAC9-212ENST00000432645 ZCCHC11Q5TAX3 1644 aaKnown RBP11.76□□□□□ -0.53
HDAC9-212ENST00000432645 SYCP2Q9BX26 1530 aa11.76□□□□□ -0.53
HDAC9-212ENST00000432645 CCDC141Q6ZP82 1450 aa11.75□□□□□ -0.53
HDAC9-212ENST00000432645 SHANK2Q9UPX8 1470 aa11.75□□□□□ -0.53
HDAC9-212ENST00000432645 ANP32EQ9BTT0 268 aa11.75□□□□□ -0.53
HDAC9-212ENST00000432645 OSCARQ8IYS5 282 aa11.75□□□□□ -0.53
HDAC9-212ENST00000432645 RPRD2Q5VT52 1461 aaKnown RBP11.74□□□□□ -0.53
HDAC9-212ENST00000432645 RSPH4AQ5TD94 716 aa11.74□□□□□ -0.53
HDAC9-212ENST00000432645 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
HDAC9-212ENST00000432645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC9-212ENST00000432645 NBPF8Q3BBV2 869 aa11.73□□□□□ -0.53
HDAC9-212ENST00000432645 HSPA5P11021 654 aaKnown RBP11.73□□□□□ -0.53
HDAC9-212ENST00000432645 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
HDAC9-212ENST00000432645 ARHGEF5Q12774 1597 aa11.72□□□□□ -0.53
HDAC9-212ENST00000432645 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
HDAC9-212ENST00000432645 EFCAB2Q5VUJ9 269 aa11.72□□□□□ -0.53
HDAC9-212ENST00000432645 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
HDAC9-212ENST00000432645 PLCH2O75038 1416 aa11.71□□□□□ -0.53
HDAC9-212ENST00000432645 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
HDAC9-212ENST00000432645 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
HDAC9-212ENST00000432645 EIF4G2P78344 907 aaKnown RBP eCLIP11.7□□□□□ -0.54
HDAC9-212ENST00000432645 MYO5CQ9NQX4 1742 aa11.7□□□□□ -0.54
HDAC9-212ENST00000432645 AFAP1Q8N556 730 aa11.69□□□□□ -0.54
HDAC9-212ENST00000432645 TEX14Q8IWB6 1497 aa11.69□□□□□ -0.54
HDAC9-212ENST00000432645 TRAPPC8Q9Y2L5 1435 aa11.67□□□□□ -0.54
HDAC9-212ENST00000432645 KDM2AQ9Y2K7 1162 aa11.66□□□□□ -0.54
HDAC9-212ENST00000432645 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
HDAC9-212ENST00000432645 MYT1LQ9UL68 1186 aa11.66□□□□□ -0.54
HDAC9-212ENST00000432645 WDR7Q9Y4E6 1490 aa11.66□□□□□ -0.54
HDAC9-212ENST00000432645 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
HDAC9-212ENST00000432645 NPM1P06748 294 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC9-212ENST00000432645 ANP32CO43423 234 aa11.65□□□□□ -0.54
HDAC9-212ENST00000432645 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
HDAC9-212ENST00000432645 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
HDAC9-212ENST00000432645 ASXL2Q76L83 1435 aa11.64□□□□□ -0.55
HDAC9-212ENST00000432645 FAM135AQ9P2D6 1515 aa11.63□□□□□ -0.55
HDAC9-212ENST00000432645 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
HDAC9-212ENST00000432645 ABCC1P33527 1531 aa11.62□□□□□ -0.55
HDAC9-212ENST00000432645 RGL3Q3MIN7 710 aa11.62□□□□□ -0.55
HDAC9-212ENST00000432645 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
HDAC9-212ENST00000432645 MAST1Q9Y2H9 1570 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms