RNA–Protein interactions for RNA: ENST00000432331.1

LINC00390-201, long intergenic non-protein coding RNA 390, humanhuman

TSL 5 BASIC

Gene LINC00390, Length 340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00390-201ENST00000432331 ADCY10Q96PN6 1610 aa9.67□□□□□ -0.86
LINC00390-201ENST00000432331 EHBP1L1Q8N3D4 1523 aa9.66□□□□□ -0.86
LINC00390-201ENST00000432331 KDM5BQ9UGL1 1544 aa9.66□□□□□ -0.86
LINC00390-201ENST00000432331 KCNA4P22459 653 aa9.65□□□□□ -0.86
LINC00390-201ENST00000432331 MTUS2Q5JR59 1369 aa9.64□□□□□ -0.87
LINC00390-201ENST00000432331 ARID3CA6NKF2 412 aa9.64□□□□□ -0.87
LINC00390-201ENST00000432331 ATP10BO94823 1461 aa9.64□□□□□ -0.87
LINC00390-201ENST00000432331 LRRC9Q6ZRR7 1453 aa9.64□□□□□ -0.87
LINC00390-201ENST00000432331 LRRIQ1Q96JM4 1722 aa9.63□□□□□ -0.87
LINC00390-201ENST00000432331 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
LINC00390-201ENST00000432331 CDK11AQ9UQ88 783 aaPredicted RBP9.63□□□□□ -0.87
LINC00390-201ENST00000432331 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
LINC00390-201ENST00000432331 NEFLP07196 543 aa9.62□□□□□ -0.87
LINC00390-201ENST00000432331 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
LINC00390-201ENST00000432331 PKNOX2Q96KN3 472 aa9.62□□□□□ -0.87
LINC00390-201ENST00000432331 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC00390-201ENST00000432331 HOXD11P31277 338 aaPredicted RBP9.61□□□□□ -0.87
LINC00390-201ENST00000432331 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
LINC00390-201ENST00000432331 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
LINC00390-201ENST00000432331 DNAJC5Q9H3Z4 198 aa9.6□□□□□ -0.87
LINC00390-201ENST00000432331 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
LINC00390-201ENST00000432331 KIF14Q15058 1648 aa9.6□□□□□ -0.87
LINC00390-201ENST00000432331 WDR7Q9Y4E6 1490 aa9.59□□□□□ -0.87
LINC00390-201ENST00000432331 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
LINC00390-201ENST00000432331 MAPKBP1O60336 1514 aa9.58□□□□□ -0.88
LINC00390-201ENST00000432331 PLEKHD1A6NEE1 506 aa9.58□□□□□ -0.88
LINC00390-201ENST00000432331 KANK4Q5T7N3 995 aaPredicted RBP9.58□□□□□ -0.88
LINC00390-201ENST00000432331 ASXL2Q76L83 1435 aa9.57□□□□□ -0.88
LINC00390-201ENST00000432331 SUPT6HQ7KZ85 1726 aaKnown RBP9.57□□□□□ -0.88
LINC00390-201ENST00000432331 GLIPR1L2Q4G1C9 344 aa9.57□□□□□ -0.88
LINC00390-201ENST00000432331 SALL2Q9Y467 1007 aaPredicted RBP9.57□□□□□ -0.88
LINC00390-201ENST00000432331 NCOA2Q15596 1464 aa9.57□□□□□ -0.88
LINC00390-201ENST00000432331 MYOM3Q5VTT5 1437 aa9.53□□□□□ -0.88
LINC00390-201ENST00000432331 PHLDB1Q86UU1 1377 aa9.52□□□□□ -0.88
LINC00390-201ENST00000432331 CCNB3Q8WWL7 1395 aa9.52□□□□□ -0.88
LINC00390-201ENST00000432331 ABCC10Q5T3U5 1492 aa9.52□□□□□ -0.89
LINC00390-201ENST00000432331 ITSN2Q9NZM3 1697 aa9.51□□□□□ -0.89
LINC00390-201ENST00000432331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00390-201ENST00000432331 TTC37Q6PGP7 1564 aa9.51□□□□□ -0.89
LINC00390-201ENST00000432331 C11orf95C9JLR9 678 aaPredicted RBP9.51□□□□□ -0.89
LINC00390-201ENST00000432331 ABCA9Q8IUA7 1624 aa9.5□□□□□ -0.89
LINC00390-201ENST00000432331 FGD6Q6ZV73 1430 aa9.49□□□□□ -0.89
LINC00390-201ENST00000432331 MIA2Q96PC5 1412 aa9.49□□□□□ -0.89
LINC00390-201ENST00000432331 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
LINC00390-201ENST00000432331 GPATCH8Q9UKJ3 1502 aaKnown RBP9.49□□□□□ -0.89
LINC00390-201ENST00000432331 DIP2BQ9P265 1576 aa9.49□□□□□ -0.89
LINC00390-201ENST00000432331 PREX2Q70Z35 1606 aa9.49□□□□□ -0.89
LINC00390-201ENST00000432331 ARAP3Q8WWN8 1544 aa9.48□□□□□ -0.89
LINC00390-201ENST00000432331 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
LINC00390-201ENST00000432331 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
LINC00390-201ENST00000432331 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
LINC00390-201ENST00000432331 GLI2P10070 1586 aa9.48□□□□□ -0.89
LINC00390-201ENST00000432331 ARHGAP5Q13017 1502 aa9.47□□□□□ -0.89
LINC00390-201ENST00000432331 FKBP8Q14318 412 aa9.47□□□□□ -0.89
LINC00390-201ENST00000432331 MYO5CQ9NQX4 1742 aa9.46□□□□□ -0.89
LINC00390-201ENST00000432331 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
LINC00390-201ENST00000432331 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
LINC00390-201ENST00000432331 CFDP1Q9UEE9 299 aaPredicted RBP9.46□□□□□ -0.9
LINC00390-201ENST00000432331 PLCH2O75038 1416 aa9.46□□□□□ -0.9
LINC00390-201ENST00000432331 TCOF1Q13428 1488 aaKnown RBP9.46□□□□□ -0.9
LINC00390-201ENST00000432331 NOP58Q9Y2X3 529 aaKnown RBP9.45□□□□□ -0.9
LINC00390-201ENST00000432331 CAMSAP2Q08AD1 1489 aa9.45□□□□□ -0.9
LINC00390-201ENST00000432331 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
LINC00390-201ENST00000432331 USP35Q9P2H5 1018 aa9.44□□□□□ -0.9
LINC00390-201ENST00000432331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00390-201ENST00000432331 CD109Q6YHK3 1445 aa9.44□□□□□ -0.9
LINC00390-201ENST00000432331 CFAP74Q9C0B2 1584 aa9.44□□□□□ -0.9
LINC00390-201ENST00000432331 MAP3K4Q9Y6R4 1608 aa9.44□□□□□ -0.9
LINC00390-201ENST00000432331 CDC42BPAQ5VT25 1732 aa9.44□□□□□ -0.9
LINC00390-201ENST00000432331 FANCAO15360 1455 aa9.43□□□□□ -0.9
LINC00390-201ENST00000432331 PLEKHH2Q8IVE3 1493 aa9.43□□□□□ -0.9
LINC00390-201ENST00000432331 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
LINC00390-201ENST00000432331 FAM50AQ14320 339 aaKnown RBP9.42□□□□□ -0.9
LINC00390-201ENST00000432331 SAMD9LQ8IVG5 1584 aa9.41□□□□□ -0.9
LINC00390-201ENST00000432331 ABCC1P33527 1531 aa9.41□□□□□ -0.9
LINC00390-201ENST00000432331 TEX14Q8IWB6 1497 aa9.41□□□□□ -0.9
LINC00390-201ENST00000432331 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
LINC00390-201ENST00000432331 NEO1Q92859 1461 aa9.4□□□□□ -0.9
LINC00390-201ENST00000432331 CDC42BPBQ9Y5S2 1711 aa9.4□□□□□ -0.9
LINC00390-201ENST00000432331 ZNF777Q9ULD5 760 aaPredicted RBP9.4□□□□□ -0.9
LINC00390-201ENST00000432331 SYCP2Q9BX26 1530 aa9.4□□□□□ -0.91
LINC00390-201ENST00000432331 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
LINC00390-201ENST00000432331 ARHGEF5Q12774 1597 aa9.39□□□□□ -0.91
LINC00390-201ENST00000432331 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
LINC00390-201ENST00000432331 ADGRL1O94910 1474 aa9.39□□□□□ -0.91
LINC00390-201ENST00000432331 CCDC141Q6ZP82 1450 aa9.39□□□□□ -0.91
LINC00390-201ENST00000432331 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
LINC00390-201ENST00000432331 SHANK2Q9UPX8 1470 aa9.38□□□□□ -0.91
LINC00390-201ENST00000432331 DAPK1P53355 1430 aa9.38□□□□□ -0.91
LINC00390-201ENST00000432331 WASHC2AQ641Q2 1341 aa9.37□□□□□ -0.91
LINC00390-201ENST00000432331 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
LINC00390-201ENST00000432331 WASHC2CQ9Y4E1 1318 aa9.37□□□□□ -0.91
LINC00390-201ENST00000432331 CCER2I3L3R5 266 aa9.37□□□□□ -0.91
LINC00390-201ENST00000432331 KIF13AQ9H1H9 1805 aa9.37□□□□□ -0.91
LINC00390-201ENST00000432331 AKNAQ7Z591 1439 aa9.37□□□□□ -0.91
LINC00390-201ENST00000432331 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
LINC00390-201ENST00000432331 BCANQ96GW7 911 aa9.36□□□□□ -0.91
LINC00390-201ENST00000432331 ZNF518AQ6AHZ1 1483 aa9.35□□□□□ -0.91
LINC00390-201ENST00000432331 ABCC5O15440 1437 aa9.35□□□□□ -0.91
LINC00390-201ENST00000432331 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms