RNA–Protein interactions for RNA: ENST00000431037.2

PMS2P1-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 1, humanhuman

BASIC

Gene PMS2P1, Length 1,228 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P1-201ENST00000431037 FER1L4A9Z1Z3 1794 aa28.62■■■□□ 2.17
PMS2P1-201ENST00000431037 SCAPERQ9BY12 1400 aa28.62■■■□□ 2.17
PMS2P1-201ENST00000431037 KIF14Q15058 1648 aa28.56■■■□□ 2.16
PMS2P1-201ENST00000431037 CDK11AQ9UQ88 783 aaPredicted RBP28.56■■■□□ 2.16
PMS2P1-201ENST00000431037 ATP10AO60312 1499 aa28.54■■■□□ 2.16
PMS2P1-201ENST00000431037 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
PMS2P1-201ENST00000431037 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
PMS2P1-201ENST00000431037 EFCAB2Q5VUJ9 269 aa28.53■■■□□ 2.16
PMS2P1-201ENST00000431037 ARHGAP35Q9NRY4 1499 aa28.53■■■□□ 2.16
PMS2P1-201ENST00000431037 ZNF518AQ6AHZ1 1483 aa28.52■■■□□ 2.16
PMS2P1-201ENST00000431037 HSPA2P54652 639 aa28.51■■■□□ 2.15
PMS2P1-201ENST00000431037 UBTFP17480 764 aaKnown RBP28.5■■■□□ 2.15
PMS2P1-201ENST00000431037 MLECQ14165 292 aa28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 PLPPR3Q6T4P5 718 aa28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 ATP1B4Q9UN42 357 aaPredicted RBP28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 CLIP1P30622 1438 aa28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 TROQ12816 1431 aaPredicted RBP28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 KDM5CP41229 1560 aa28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 PREX1Q8TCU6 1659 aa28.48■■■□□ 2.15
PMS2P1-201ENST00000431037 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
PMS2P1-201ENST00000431037 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
PMS2P1-201ENST00000431037 LRRIQ1Q96JM4 1722 aa28.39■■■□□ 2.14
PMS2P1-201ENST00000431037 DIP2CQ9Y2E4 1556 aa28.37■■■□□ 2.13
PMS2P1-201ENST00000431037 EHMT2Q96KQ7 1210 aa28.35■■■□□ 2.13
PMS2P1-201ENST00000431037 PREX2Q70Z35 1606 aa28.35■■■□□ 2.13
PMS2P1-201ENST00000431037 CDC42BPBQ9Y5S2 1711 aa28.35■■■□□ 2.13
PMS2P1-201ENST00000431037 CCDC18Q5T9S5 1454 aa28.34■■■□□ 2.13
PMS2P1-201ENST00000431037 MLH3Q9UHC1 1453 aa28.34■■■□□ 2.13
PMS2P1-201ENST00000431037 CERKQ8TCT0 537 aa28.33■■■□□ 2.13
PMS2P1-201ENST00000431037 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
PMS2P1-201ENST00000431037 ABCA6Q8N139 1617 aa28.31■■■□□ 2.12
PMS2P1-201ENST00000431037 ABCC1P33527 1531 aa28.3■■■□□ 2.12
PMS2P1-201ENST00000431037 UHRF1BP1Q6BDS2 1440 aa28.3■■■□□ 2.12
PMS2P1-201ENST00000431037 SETD1BQ9UPS6 1966 aaKnown RBP28.28■■■□□ 2.12
PMS2P1-201ENST00000431037 MYT1LQ9UL68 1186 aa28.28■■■□□ 2.12
PMS2P1-201ENST00000431037 AGLP35573 1532 aa28.28■■■□□ 2.12
PMS2P1-201ENST00000431037 CASKIN1Q8WXD9 1431 aa28.27■■■□□ 2.12
PMS2P1-201ENST00000431037 ITSN2Q9NZM3 1697 aa28.27■■■□□ 2.12
PMS2P1-201ENST00000431037 DMRT2Q9Y5R5 561 aa28.27■■■□□ 2.12
PMS2P1-201ENST00000431037 CEBPAP49715 358 aaPredicted RBP28.26■■■□□ 2.11
PMS2P1-201ENST00000431037 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
PMS2P1-201ENST00000431037 C3P01024 1663 aa28.23■■■□□ 2.11
PMS2P1-201ENST00000431037 TRAPPC8Q9Y2L5 1435 aa28.2■■■□□ 2.11
PMS2P1-201ENST00000431037 CDC42BPAQ5VT25 1732 aa28.2■■■□□ 2.1
PMS2P1-201ENST00000431037 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
PMS2P1-201ENST00000431037 ESF1Q9H501 851 aaKnown RBP28.18■■■□□ 2.1
PMS2P1-201ENST00000431037 KIDINS220Q9ULH0 1771 aa28.18■■■□□ 2.1
PMS2P1-201ENST00000431037 CNTLNQ9NXG0 1405 aa28.17■■■□□ 2.1
PMS2P1-201ENST00000431037 PTPRTO14522 1441 aa28.13■■■□□ 2.09
PMS2P1-201ENST00000431037 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
PMS2P1-201ENST00000431037 MROH2AA6NES4 1674 aa28.1■■■□□ 2.09
PMS2P1-201ENST00000431037 SYCP2Q9BX26 1530 aa28.07■■■□□ 2.08
PMS2P1-201ENST00000431037 NPATQ14207 1427 aa28.05■■■□□ 2.08
PMS2P1-201ENST00000431037 GPATCH8Q9UKJ3 1502 aaKnown RBP28.03■■■□□ 2.08
PMS2P1-201ENST00000431037 PLEKHH2Q8IVE3 1493 aa28.02■■■□□ 2.08
PMS2P1-201ENST00000431037 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
PMS2P1-201ENST00000431037 ATP7AQ04656 1500 aa28.01■■■□□ 2.07
PMS2P1-201ENST00000431037 SPAG9O60271 1321 aaKnown RBP28■■■□□ 2.07
PMS2P1-201ENST00000431037 IQSEC2Q5JU85 1478 aa28■■■□□ 2.07
PMS2P1-201ENST00000431037 KIAA1107Q9UPP5 1409 aa28■■■□□ 2.07
PMS2P1-201ENST00000431037 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
PMS2P1-201ENST00000431037 ZNF777Q9ULD5 760 aaPredicted RBP27.99■■■□□ 2.07
PMS2P1-201ENST00000431037 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
PMS2P1-201ENST00000431037 LTBP4Q8N2S1 1624 aa27.97■■■□□ 2.07
PMS2P1-201ENST00000431037 SUPT6HQ7KZ85 1726 aaKnown RBP27.97■■■□□ 2.07
PMS2P1-201ENST00000431037 CAMSAP1Q5T5Y3 1602 aa27.94■■■□□ 2.06
PMS2P1-201ENST00000431037 ZMYM3Q14202 1370 aa27.93■■■□□ 2.06
PMS2P1-201ENST00000431037 ZNF142P52746 1687 aaPredicted RBP27.93■■■□□ 2.06
PMS2P1-201ENST00000431037 A2MP01023 1474 aa27.92■■■□□ 2.06
PMS2P1-201ENST00000431037 CCNB3Q8WWL7 1395 aa27.92■■■□□ 2.06
PMS2P1-201ENST00000431037 CLTCQ00610 1675 aaKnown RBP27.91■■■□□ 2.06
PMS2P1-201ENST00000431037 CFDP1Q9UEE9 299 aaPredicted RBP27.91■■■□□ 2.06
PMS2P1-201ENST00000431037 DISP3Q9P2K9 1392 aa27.9■■■□□ 2.06
PMS2P1-201ENST00000431037 MYO3AQ8NEV4 1616 aa27.9■■■□□ 2.06
PMS2P1-201ENST00000431037 HNRNPMP52272 730 aaKnown RBP eCLIP27.9■■■□□ 2.06
PMS2P1-201ENST00000431037 ADGBQ8N7X0 1667 aa27.89■■■□□ 2.06
PMS2P1-201ENST00000431037 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
PMS2P1-201ENST00000431037 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
PMS2P1-201ENST00000431037 CEP170BQ9Y4F5 1589 aaPredicted RBP27.85■■■□□ 2.05
PMS2P1-201ENST00000431037 SPATA31D1Q6ZQQ2 1576 aa27.84■■■□□ 2.05
PMS2P1-201ENST00000431037 TIAM1Q13009 1591 aa27.82■■■□□ 2.04
PMS2P1-201ENST00000431037 PPP6R1Q9UPN7 881 aa27.82■■■□□ 2.04
PMS2P1-201ENST00000431037 PTPRKQ15262 1439 aa27.82■■■□□ 2.04
PMS2P1-201ENST00000431037 EHBP1L1Q8N3D4 1523 aa27.82■■■□□ 2.04
PMS2P1-201ENST00000431037 TCOF1Q13428 1488 aaKnown RBP27.79■■■□□ 2.04
PMS2P1-201ENST00000431037 PKD2Q13563 968 aa27.79■■■□□ 2.04
PMS2P1-201ENST00000431037 GGT6Q6P531 493 aa27.77■■■□□ 2.04
PMS2P1-201ENST00000431037 RTEL1-TNFRSF6BF6WH68 1400 aa27.76■■■□□ 2.04
PMS2P1-201ENST00000431037 MBD5Q9P267 1494 aa27.76■■■□□ 2.03
PMS2P1-201ENST00000431037 NCKAP5LQ9HCH0 1330 aa27.74■■■□□ 2.03
PMS2P1-201ENST00000431037 CEP162Q5TB80 1403 aa27.74■■■□□ 2.03
PMS2P1-201ENST00000431037 ILDR2Q71H61 639 aa27.73■■■□□ 2.03
PMS2P1-201ENST00000431037 FAM135AQ9P2D6 1515 aa27.72■■■□□ 2.03
PMS2P1-201ENST00000431037 ZNF335Q9H4Z2 1342 aaPredicted RBP27.71■■■□□ 2.03
PMS2P1-201ENST00000431037 A2ML1A8K2U0 1454 aa27.71■■■□□ 2.03
PMS2P1-201ENST00000431037 SOCS7O14512 581 aa27.71■■■□□ 2.03
PMS2P1-201ENST00000431037 ZNF644Q9H582 1327 aaPredicted RBP27.68■■■□□ 2.02
PMS2P1-201ENST00000431037 DHX29Q7Z478 1369 aaKnown RBP27.68■■■□□ 2.02
PMS2P1-201ENST00000431037 DNMT1P26358 1616 aaKnown RBP27.67■■■□□ 2.02
PMS2P1-201ENST00000431037 CCDC141Q6ZP82 1450 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 205.3 ms