RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 HECW2Q9P2P5 1572 aa13.61□□□□□ -0.23
ECHDC1-207ENST00000430841 MAP3K4Q9Y6R4 1608 aa13.6□□□□□ -0.23
ECHDC1-207ENST00000430841 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-207ENST00000430841 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
ECHDC1-207ENST00000430841 FAM9AQ8IZU1 332 aaPredicted RBP13.58□□□□□ -0.24
ECHDC1-207ENST00000430841 KDM5BQ9UGL1 1544 aa13.55□□□□□ -0.24
ECHDC1-207ENST00000430841 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
ECHDC1-207ENST00000430841 KIAA0556O60303 1618 aa13.54□□□□□ -0.24
ECHDC1-207ENST00000430841 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
ECHDC1-207ENST00000430841 RAPGEF2Q9Y4G8 1499 aa13.53□□□□□ -0.24
ECHDC1-207ENST00000430841 UGGT2Q9NYU1 1516 aa13.53□□□□□ -0.24
ECHDC1-207ENST00000430841 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
ECHDC1-207ENST00000430841 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
ECHDC1-207ENST00000430841 CTTNBP2Q8WZ74 1663 aa13.5□□□□□ -0.25
ECHDC1-207ENST00000430841 CD109Q6YHK3 1445 aa13.49□□□□□ -0.25
ECHDC1-207ENST00000430841 COL17A1Q9UMD9 1497 aaPredicted RBP13.48□□□□□ -0.25
ECHDC1-207ENST00000430841 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
ECHDC1-207ENST00000430841 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
ECHDC1-207ENST00000430841 KIF21BO75037 1637 aa13.46□□□□□ -0.26
ECHDC1-207ENST00000430841 MAGI3Q5TCQ9 1506 aa13.45□□□□□ -0.26
ECHDC1-207ENST00000430841 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
ECHDC1-207ENST00000430841 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-207ENST00000430841 FBXO41Q8TF61 875 aa13.4□□□□□ -0.26
ECHDC1-207ENST00000430841 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-207ENST00000430841 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
ECHDC1-207ENST00000430841 ABCA8O94911 1581 aa13.38□□□□□ -0.27
ECHDC1-207ENST00000430841 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
ECHDC1-207ENST00000430841 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
ECHDC1-207ENST00000430841 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
ECHDC1-207ENST00000430841 PHLDB1Q86UU1 1377 aa13.34□□□□□ -0.27
ECHDC1-207ENST00000430841 PTPRMP28827 1452 aa13.33□□□□□ -0.28
ECHDC1-207ENST00000430841 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
ECHDC1-207ENST00000430841 PCF11O94913 1555 aaKnown RBP13.3□□□□□ -0.28
ECHDC1-207ENST00000430841 NEO1Q92859 1461 aa13.29□□□□□ -0.28
ECHDC1-207ENST00000430841 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
ECHDC1-207ENST00000430841 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
ECHDC1-207ENST00000430841 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
ECHDC1-207ENST00000430841 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
ECHDC1-207ENST00000430841 CFAP74Q9C0B2 1584 aa13.28□□□□□ -0.28
ECHDC1-207ENST00000430841 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
ECHDC1-207ENST00000430841 POGZQ7Z3K3 1410 aa13.27□□□□□ -0.29
ECHDC1-207ENST00000430841 RAPGEF6Q8TEU7 1601 aa13.27□□□□□ -0.29
ECHDC1-207ENST00000430841 RAPGEF3O95398 923 aa13.26□□□□□ -0.29
ECHDC1-207ENST00000430841 RIMS1Q86UR5 1692 aaKnown RBP13.26□□□□□ -0.29
ECHDC1-207ENST00000430841 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
ECHDC1-207ENST00000430841 ATP10BO94823 1461 aa13.25□□□□□ -0.29
ECHDC1-207ENST00000430841 OTUD5Q96G74 571 aa13.25□□□□□ -0.29
ECHDC1-207ENST00000430841 FANCAO15360 1455 aa13.23□□□□□ -0.29
ECHDC1-207ENST00000430841 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
ECHDC1-207ENST00000430841 DENND4BO75064 1496 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-207ENST00000430841 ZNF579Q8NAF0 562 aaKnown RBP13.21□□□□□ -0.29
ECHDC1-207ENST00000430841 LMTK3Q96Q04 1460 aa13.21□□□□□ -0.3
ECHDC1-207ENST00000430841 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
ECHDC1-207ENST00000430841 RANGAP1P46060 587 aaPredicted RBP13.2□□□□□ -0.3
ECHDC1-207ENST00000430841 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
ECHDC1-207ENST00000430841 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
ECHDC1-207ENST00000430841 SAMD9Q5K651 1589 aa13.19□□□□□ -0.3
ECHDC1-207ENST00000430841 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
ECHDC1-207ENST00000430841 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-207ENST00000430841 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
ECHDC1-207ENST00000430841 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
ECHDC1-207ENST00000430841 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
ECHDC1-207ENST00000430841 CLCN6P51797 869 aa13.16□□□□□ -0.3
ECHDC1-207ENST00000430841 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
ECHDC1-207ENST00000430841 HSPA2P54652 639 aa13.15□□□□□ -0.3
ECHDC1-207ENST00000430841 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
ECHDC1-207ENST00000430841 MLECQ14165 292 aa13.14□□□□□ -0.31
ECHDC1-207ENST00000430841 NUP153P49790 1475 aaKnown RBP13.14□□□□□ -0.31
ECHDC1-207ENST00000430841 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
ECHDC1-207ENST00000430841 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
ECHDC1-207ENST00000430841 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
ECHDC1-207ENST00000430841 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
ECHDC1-207ENST00000430841 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
ECHDC1-207ENST00000430841 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
ECHDC1-207ENST00000430841 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
ECHDC1-207ENST00000430841 PREX1Q8TCU6 1659 aa13.09□□□□□ -0.31
ECHDC1-207ENST00000430841 TTC37Q6PGP7 1564 aa13.09□□□□□ -0.31
ECHDC1-207ENST00000430841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.08□□□□□ -0.31
ECHDC1-207ENST00000430841 PELP1Q8IZL8 1130 aaKnown RBP13.08□□□□□ -0.32
ECHDC1-207ENST00000430841 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
ECHDC1-207ENST00000430841 EEA1Q15075 1411 aa13.07□□□□□ -0.32
ECHDC1-207ENST00000430841 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
ECHDC1-207ENST00000430841 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
ECHDC1-207ENST00000430841 YEATS2Q9ULM3 1422 aa13.06□□□□□ -0.32
ECHDC1-207ENST00000430841 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
ECHDC1-207ENST00000430841 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
ECHDC1-207ENST00000430841 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
ECHDC1-207ENST00000430841 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
ECHDC1-207ENST00000430841 CDK11AQ9UQ88 783 aaPredicted RBP13.04□□□□□ -0.32
ECHDC1-207ENST00000430841 ATP10AO60312 1499 aa13.03□□□□□ -0.32
ECHDC1-207ENST00000430841 CDK13Q14004 1512 aaKnown RBP13.03□□□□□ -0.32
ECHDC1-207ENST00000430841 POTEMA6NI47 508 aa13.02□□□□□ -0.33
ECHDC1-207ENST00000430841 POTEJP0CG39 1038 aa13.02□□□□□ -0.33
ECHDC1-207ENST00000430841 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
ECHDC1-207ENST00000430841 KIF14Q15058 1648 aa13.02□□□□□ -0.33
ECHDC1-207ENST00000430841 CLIP1P30622 1438 aa13.01□□□□□ -0.33
ECHDC1-207ENST00000430841 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
ECHDC1-207ENST00000430841 ARHGEF12Q9NZN5 1544 aa13.01□□□□□ -0.33
ECHDC1-207ENST00000430841 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
ECHDC1-207ENST00000430841 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms