RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 CUX1P39880 1505 aa8.97□□□□□ -0.97
CPS1-203ENST00000430249 ATAD2BQ9ULI0 1458 aa8.96□□□□□ -0.97
CPS1-203ENST00000430249 OS9Q13438 667 aaPredicted RBP8.96□□□□□ -0.97
CPS1-203ENST00000430249 NOP58Q9Y2X3 529 aaKnown RBP8.96□□□□□ -0.97
CPS1-203ENST00000430249 SUPT16HQ9Y5B9 1047 aaKnown RBP8.96□□□□□ -0.97
CPS1-203ENST00000430249 LMOD3Q0VAK6 560 aa8.96□□□□□ -0.98
CPS1-203ENST00000430249 RTF1Q92541 710 aaKnown RBP8.96□□□□□ -0.98
CPS1-203ENST00000430249 WIZO95785 1651 aa8.95□□□□□ -0.98
CPS1-203ENST00000430249 HTATSF1O43719 755 aaKnown RBP8.95□□□□□ -0.98
CPS1-203ENST00000430249 HSPA5P11021 654 aaKnown RBP8.94□□□□□ -0.98
CPS1-203ENST00000430249 PMFBP1Q8TBY8 1022 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 STAC3Q96MF2 364 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 RAB3GAP2Q9H2M9 1393 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 PKD2Q13563 968 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
CPS1-203ENST00000430249 SIN3AQ96ST3 1273 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 MPHOSPH9Q99550 1183 aa8.94□□□□□ -0.98
CPS1-203ENST00000430249 RWDD1Q9H446 243 aaPredicted RBP8.94□□□□□ -0.98
CPS1-203ENST00000430249 NUP155O75694 1391 aa8.93□□□□□ -0.98
CPS1-203ENST00000430249 U2SURPO15042 1029 aaKnown RBP8.93□□□□□ -0.98
CPS1-203ENST00000430249 CC2D1BQ5T0F9 858 aaKnown RBP8.93□□□□□ -0.98
CPS1-203ENST00000430249 NGEFQ8N5V2 710 aa8.93□□□□□ -0.98
CPS1-203ENST00000430249 HIRIP3Q9BW71 556 aaPredicted RBP8.93□□□□□ -0.98
CPS1-203ENST00000430249 LAS1LQ9Y4W2 734 aaKnown RBP8.93□□□□□ -0.98
CPS1-203ENST00000430249 IRX6P78412 446 aaPredicted RBP8.93□□□□□ -0.98
CPS1-203ENST00000430249 TERF2IPQ9NYB0 399 aa8.93□□□□□ -0.98
CPS1-203ENST00000430249 TCERG1O14776 1098 aaKnown RBP8.92□□□□□ -0.98
CPS1-203ENST00000430249 A0A0G2JS52 829 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 CHMP4CQ96CF2 233 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 KIF15Q9NS87 1388 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 CHAF1AQ13111 956 aaPredicted RBP8.91□□□□□ -0.98
CPS1-203ENST00000430249 FRAT1Q92837 279 aaPredicted RBP8.91□□□□□ -0.98
CPS1-203ENST00000430249 KCNJ4P48050 445 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 FGD1P98174 961 aa8.91□□□□□ -0.98
CPS1-203ENST00000430249 SPAG9O60271 1321 aaKnown RBP8.91□□□□□ -0.98
CPS1-203ENST00000430249 GPATCH3Q96I76 525 aa8.9□□□□□ -0.98
CPS1-203ENST00000430249 GOLGA6L4A6NEF3 574 aa8.9□□□□□ -0.98
CPS1-203ENST00000430249 CSPP1Q1MSJ5 1256 aa8.9□□□□□ -0.98
CPS1-203ENST00000430249 GBP4Q96PP9 640 aa8.9□□□□□ -0.98
CPS1-203ENST00000430249 FANCD2Q9BXW9 1451 aa8.9□□□□□ -0.98
CPS1-203ENST00000430249 HMMRO75330 724 aa8.89□□□□□ -0.99
CPS1-203ENST00000430249 SYAP1Q96A49 352 aaPredicted RBP8.89□□□□□ -0.99
CPS1-203ENST00000430249 DNTTIP2Q5QJE6 756 aaKnown RBP8.88□□□□□ -0.99
CPS1-203ENST00000430249 NPHP1O15259 732 aa8.88□□□□□ -0.99
CPS1-203ENST00000430249 EID1Q9Y6B2 187 aa8.88□□□□□ -0.99
CPS1-203ENST00000430249 KIAA1211Q6ZU35 1233 aa8.88□□□□□ -0.99
CPS1-203ENST00000430249 CCDC34Q96HJ3 373 aa8.88□□□□□ -0.99
CPS1-203ENST00000430249 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
CPS1-203ENST00000430249 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
CPS1-203ENST00000430249 CCDC144AA2RUR9 1427 aa8.87□□□□□ -0.99
CPS1-203ENST00000430249 RCAN3Q9UKA8 241 aa8.87□□□□□ -0.99
CPS1-203ENST00000430249 RGS3P49796 1198 aa8.86□□□□□ -0.99
CPS1-203ENST00000430249 FHOD3Q2V2M9 1422 aa8.86□□□□□ -0.99
CPS1-203ENST00000430249 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
CPS1-203ENST00000430249 TPM4P67936 248 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 STK31Q9BXU1 1019 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 MYBBP1AQ9BQG0 1328 aaKnown RBP8.85□□□□□ -0.99
CPS1-203ENST00000430249 ERICH3Q5RHP9 1530 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 ARXQ96QS3 562 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
CPS1-203ENST00000430249 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
CPS1-203ENST00000430249 AAMPQ13685 434 aa8.84□□□□□ -0.99
CPS1-203ENST00000430249 MSNP26038 577 aaKnown RBP8.84□□□□□ -0.99
CPS1-203ENST00000430249 KIF21BO75037 1637 aa8.84□□□□□ -1
CPS1-203ENST00000430249 KANK4Q5T7N3 995 aaPredicted RBP8.83□□□□□ -1
CPS1-203ENST00000430249 MIA2Q96PC5 1412 aa8.83□□□□□ -1
CPS1-203ENST00000430249 TMX4Q9H1E5 349 aaPredicted RBP8.83□□□□□ -1
CPS1-203ENST00000430249 KIF3AQ9Y496 699 aa8.83□□□□□ -1
CPS1-203ENST00000430249 GGT6Q6P531 493 aa8.83□□□□□ -1
CPS1-203ENST00000430249 EFCAB5A4FU69 1503 aa8.82□□□□□ -1
CPS1-203ENST00000430249 FYCO1Q9BQS8 1478 aa8.82□□□□□ -1
CPS1-203ENST00000430249 NCAPD3P42695 1498 aa8.82□□□□□ -1
CPS1-203ENST00000430249 KIAA2012Q0VF49 1180 aa8.82□□□□□ -1
CPS1-203ENST00000430249 PTPRGP23470 1445 aa8.81□□□□□ -1
CPS1-203ENST00000430249 SCAPERQ9BY12 1400 aa8.81□□□□□ -1
CPS1-203ENST00000430249 CGNL1Q0VF96 1302 aa8.81□□□□□ -1
CPS1-203ENST00000430249 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
CPS1-203ENST00000430249 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -1
CPS1-203ENST00000430249 GAPVD1Q14C86 1478 aa8.81□□□□□ -1
CPS1-203ENST00000430249 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
CPS1-203ENST00000430249 PHF14O94880 888 aa8.81□□□□□ -1
CPS1-203ENST00000430249 GNL2Q13823 731 aaKnown RBP8.81□□□□□ -1
CPS1-203ENST00000430249 CENPJQ9HC77 1338 aaPredicted RBP8.81□□□□□ -1
CPS1-203ENST00000430249 ROCK1Q13464 1354 aa8.8□□□□□ -1
CPS1-203ENST00000430249 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
CPS1-203ENST00000430249 EVC2Q86UK5 1308 aa8.8□□□□□ -1
CPS1-203ENST00000430249 WASHC2CQ9Y4E1 1318 aa8.8□□□□□ -1
CPS1-203ENST00000430249 KIF3BO15066 747 aa8.8□□□□□ -1
CPS1-203ENST00000430249 ITPRIPQ8IWB1 547 aa8.8□□□□□ -1
CPS1-203ENST00000430249 JPH4Q96JJ6 628 aa8.8□□□□□ -1
CPS1-203ENST00000430249 PLEKHH2Q8IVE3 1493 aa8.79□□□□□ -1
CPS1-203ENST00000430249 NAP1L5Q96NT1 182 aaPredicted RBP8.79□□□□□ -1
CPS1-203ENST00000430249 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
CPS1-203ENST00000430249 WWC1Q8IX03 1113 aa8.78□□□□□ -1
CPS1-203ENST00000430249 CASKIN1Q8WXD9 1431 aa8.78□□□□□ -1
CPS1-203ENST00000430249 FGD5Q6ZNL6 1462 aa8.78□□□□□ -1
CPS1-203ENST00000430249 DHX57Q6P158 1386 aaKnown RBP8.78□□□□□ -1
CPS1-203ENST00000430249 E9PSI1 815 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms