RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ASXL2Q76L83 1435 aa12.94□□□□□ -0.34
NUP98-207ENST00000429801 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
NUP98-207ENST00000429801 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
NUP98-207ENST00000429801 ABCC10Q5T3U5 1492 aa12.93□□□□□ -0.34
NUP98-207ENST00000429801 MIA2Q96PC5 1412 aa12.93□□□□□ -0.34
NUP98-207ENST00000429801 ITSN2Q9NZM3 1697 aa12.91□□□□□ -0.34
NUP98-207ENST00000429801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.91□□□□□ -0.34
NUP98-207ENST00000429801 MAPKBP1O60336 1514 aa12.91□□□□□ -0.34
NUP98-207ENST00000429801 GPATCH8Q9UKJ3 1502 aaKnown RBP12.91□□□□□ -0.34
NUP98-207ENST00000429801 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
NUP98-207ENST00000429801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
NUP98-207ENST00000429801 FAM50AQ14320 339 aaKnown RBP12.9□□□□□ -0.34
NUP98-207ENST00000429801 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
NUP98-207ENST00000429801 PTPN23Q9H3S7 1636 aa12.88□□□□□ -0.35
NUP98-207ENST00000429801 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
NUP98-207ENST00000429801 TTC37Q6PGP7 1564 aa12.88□□□□□ -0.35
NUP98-207ENST00000429801 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
NUP98-207ENST00000429801 CDC42BPAQ5VT25 1732 aa12.88□□□□□ -0.35
NUP98-207ENST00000429801 PREX2Q70Z35 1606 aa12.86□□□□□ -0.35
NUP98-207ENST00000429801 ABCA9Q8IUA7 1624 aa12.86□□□□□ -0.35
NUP98-207ENST00000429801 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
NUP98-207ENST00000429801 PLCH2O75038 1416 aa12.85□□□□□ -0.35
NUP98-207ENST00000429801 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
NUP98-207ENST00000429801 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.35
NUP98-207ENST00000429801 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
NUP98-207ENST00000429801 ITGAEP38570 1179 aa12.83□□□□□ -0.36
NUP98-207ENST00000429801 UBE2Q2Q8WVN8 375 aa12.83□□□□□ -0.36
NUP98-207ENST00000429801 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
NUP98-207ENST00000429801 CAMSAP2Q08AD1 1489 aa12.82□□□□□ -0.36
NUP98-207ENST00000429801 ZNF644Q9H582 1327 aaPredicted RBP12.82□□□□□ -0.36
NUP98-207ENST00000429801 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
NUP98-207ENST00000429801 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
NUP98-207ENST00000429801 GLI2P10070 1586 aa12.8□□□□□ -0.36
NUP98-207ENST00000429801 PLEKHH2Q8IVE3 1493 aa12.79□□□□□ -0.36
NUP98-207ENST00000429801 SAMD9LQ8IVG5 1584 aa12.78□□□□□ -0.36
NUP98-207ENST00000429801 FAM69CQ0P6D2 419 aa12.78□□□□□ -0.36
NUP98-207ENST00000429801 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
NUP98-207ENST00000429801 DIP2BQ9P265 1576 aa12.77□□□□□ -0.36
NUP98-207ENST00000429801 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.36
NUP98-207ENST00000429801 DAPK1P53355 1430 aa12.77□□□□□ -0.36
NUP98-207ENST00000429801 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.36
NUP98-207ENST00000429801 FANCAO15360 1455 aa12.77□□□□□ -0.36
NUP98-207ENST00000429801 ABCC5O15440 1437 aa12.76□□□□□ -0.37
NUP98-207ENST00000429801 MAP3K4Q9Y6R4 1608 aa12.75□□□□□ -0.37
NUP98-207ENST00000429801 PTPRKQ15262 1439 aa12.75□□□□□ -0.37
NUP98-207ENST00000429801 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
NUP98-207ENST00000429801 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
NUP98-207ENST00000429801 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
NUP98-207ENST00000429801 MBD5Q9P267 1494 aa12.74□□□□□ -0.37
NUP98-207ENST00000429801 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
NUP98-207ENST00000429801 TSPY4P0CV99 314 aa12.73□□□□□ -0.37
NUP98-207ENST00000429801 TSPY10P0CW01 314 aa12.73□□□□□ -0.37
NUP98-207ENST00000429801 ABCC1P33527 1531 aa12.73□□□□□ -0.37
NUP98-207ENST00000429801 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
NUP98-207ENST00000429801 CCDC141Q6ZP82 1450 aa12.73□□□□□ -0.37
NUP98-207ENST00000429801 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
NUP98-207ENST00000429801 SHANK2Q9UPX8 1470 aa12.72□□□□□ -0.37
NUP98-207ENST00000429801 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
NUP98-207ENST00000429801 ROCK1Q13464 1354 aa12.72□□□□□ -0.37
NUP98-207ENST00000429801 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.37
NUP98-207ENST00000429801 ADGRL1O94910 1474 aa12.71□□□□□ -0.37
NUP98-207ENST00000429801 NEO1Q92859 1461 aa12.71□□□□□ -0.37
NUP98-207ENST00000429801 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
NUP98-207ENST00000429801 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
NUP98-207ENST00000429801 SETD5Q9C0A6 1442 aa12.7□□□□□ -0.38
NUP98-207ENST00000429801 ARHGEF12Q9NZN5 1544 aa12.7□□□□□ -0.38
NUP98-207ENST00000429801 CCDC136Q96JN2 1154 aa12.69□□□□□ -0.38
NUP98-207ENST00000429801 KIF13AQ9H1H9 1805 aa12.69□□□□□ -0.38
NUP98-207ENST00000429801 C9orf84Q5VXU9 1444 aa12.69□□□□□ -0.38
NUP98-207ENST00000429801 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
NUP98-207ENST00000429801 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
NUP98-207ENST00000429801 ANKRD30AQ9BXX3 1397 aa12.68□□□□□ -0.38
NUP98-207ENST00000429801 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
NUP98-207ENST00000429801 ADGBQ8N7X0 1667 aa12.68□□□□□ -0.38
NUP98-207ENST00000429801 RRP7BPQ9NSQ0 103 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 SALL2Q9Y467 1007 aaPredicted RBP12.67□□□□□ -0.38
NUP98-207ENST00000429801 NAIPQ13075 1403 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 NCOA1Q15788 1441 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 TRAPPC8Q9Y2L5 1435 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
NUP98-207ENST00000429801 KCNA4P22459 653 aa12.65□□□□□ -0.38
NUP98-207ENST00000429801 GCC2Q8IWJ2 1684 aa12.65□□□□□ -0.38
NUP98-207ENST00000429801 ZNF518AQ6AHZ1 1483 aa12.65□□□□□ -0.38
NUP98-207ENST00000429801 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
NUP98-207ENST00000429801 TSPOAP1O95153 1857 aa12.65□□□□□ -0.38
NUP98-207ENST00000429801 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
NUP98-207ENST00000429801 PPRC1Q5VV67 1664 aaKnown RBP12.64□□□□□ -0.39
NUP98-207ENST00000429801 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
NUP98-207ENST00000429801 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
NUP98-207ENST00000429801 POGZQ7Z3K3 1410 aa12.63□□□□□ -0.39
NUP98-207ENST00000429801 TRHP20396 242 aaPredicted RBP12.63□□□□□ -0.39
NUP98-207ENST00000429801 KIF15Q9NS87 1388 aa12.62□□□□□ -0.39
NUP98-207ENST00000429801 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
NUP98-207ENST00000429801 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
NUP98-207ENST00000429801 KDM5CP41229 1560 aa12.6□□□□□ -0.39
NUP98-207ENST00000429801 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
NUP98-207ENST00000429801 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
NUP98-207ENST00000429801 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms