RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 MAP3K1Q13233 1512 aa27.78■■■□□ 2.04
CTSD-203ENST00000429746 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
CTSD-203ENST00000429746 RAPGEF3O95398 923 aa27.77■■■□□ 2.04
CTSD-203ENST00000429746 ARHGAP5Q13017 1502 aa27.76■■■□□ 2.03
CTSD-203ENST00000429746 ADGRL1O94910 1474 aa27.76■■■□□ 2.03
CTSD-203ENST00000429746 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
CTSD-203ENST00000429746 DENND4BO75064 1496 aaPredicted RBP27.75■■■□□ 2.03
CTSD-203ENST00000429746 ZMYM4Q5VZL5 1548 aa27.72■■■□□ 2.03
CTSD-203ENST00000429746 LRRC9Q6ZRR7 1453 aa27.71■■■□□ 2.03
CTSD-203ENST00000429746 EFCAB2Q5VUJ9 269 aa27.71■■■□□ 2.03
CTSD-203ENST00000429746 POGZQ7Z3K3 1410 aa27.71■■■□□ 2.03
CTSD-203ENST00000429746 ARHGEF12Q9NZN5 1544 aa27.71■■■□□ 2.03
CTSD-203ENST00000429746 SCAPERQ9BY12 1400 aa27.7■■■□□ 2.03
CTSD-203ENST00000429746 ABCC1P33527 1531 aa27.7■■■□□ 2.02
CTSD-203ENST00000429746 SAMD9LQ8IVG5 1584 aa27.69■■■□□ 2.02
CTSD-203ENST00000429746 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
CTSD-203ENST00000429746 NCOA2Q15596 1464 aa27.67■■■□□ 2.02
CTSD-203ENST00000429746 KANK4Q5T7N3 995 aaPredicted RBP27.66■■■□□ 2.02
CTSD-203ENST00000429746 ITSN2Q9NZM3 1697 aa27.65■■■□□ 2.02
CTSD-203ENST00000429746 KDM5CP41229 1560 aa27.65■■■□□ 2.02
CTSD-203ENST00000429746 ARHGEF40Q8TER5 1519 aa27.64■■■□□ 2.02
CTSD-203ENST00000429746 SIGLEC1Q9BZZ2 1709 aa27.61■■■□□ 2.01
CTSD-203ENST00000429746 CCNB3Q8WWL7 1395 aa27.6■■■□□ 2.01
CTSD-203ENST00000429746 YEATS2Q9ULM3 1422 aa27.59■■■□□ 2.01
CTSD-203ENST00000429746 TRAPPC8Q9Y2L5 1435 aa27.59■■■□□ 2.01
CTSD-203ENST00000429746 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
CTSD-203ENST00000429746 MAGI2Q86UL8 1455 aa27.57■■■□□ 2
CTSD-203ENST00000429746 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
CTSD-203ENST00000429746 ZFYVE16Q7Z3T8 1539 aa27.55■■■□□ 2
CTSD-203ENST00000429746 AFAP1Q8N556 730 aa27.53■■■□□ 2
CTSD-203ENST00000429746 KIAA1107Q9UPP5 1409 aa27.52■■■□□ 2
CTSD-203ENST00000429746 CFDP1Q9UEE9 299 aaPredicted RBP27.51■■□□□ 1.99
CTSD-203ENST00000429746 HECW2Q9P2P5 1572 aa27.51■■□□□ 1.99
CTSD-203ENST00000429746 ZNF644Q9H582 1327 aaPredicted RBP27.5■■□□□ 1.99
CTSD-203ENST00000429746 MBD5Q9P267 1494 aa27.5■■□□□ 1.99
CTSD-203ENST00000429746 MLH3Q9UHC1 1453 aa27.5■■□□□ 1.99
CTSD-203ENST00000429746 KIDINS220Q9ULH0 1771 aa27.49■■□□□ 1.99
CTSD-203ENST00000429746 ABCA6Q8N139 1617 aa27.48■■□□□ 1.99
CTSD-203ENST00000429746 DIP2CQ9Y2E4 1556 aa27.48■■□□□ 1.99
CTSD-203ENST00000429746 PLEKHH2Q8IVE3 1493 aa27.47■■□□□ 1.99
CTSD-203ENST00000429746 ZNF777Q9ULD5 760 aaPredicted RBP27.46■■□□□ 1.99
CTSD-203ENST00000429746 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
CTSD-203ENST00000429746 ADAMTSL3P82987 1691 aa27.43■■□□□ 1.98
CTSD-203ENST00000429746 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
CTSD-203ENST00000429746 BCORL1Q5H9F3 1711 aa27.43■■□□□ 1.98
CTSD-203ENST00000429746 INO80Q9ULG1 1556 aaPredicted RBP27.43■■□□□ 1.98
CTSD-203ENST00000429746 MYOM3Q5VTT5 1437 aa27.41■■□□□ 1.98
CTSD-203ENST00000429746 ATP10AO60312 1499 aa27.41■■□□□ 1.98
CTSD-203ENST00000429746 REREQ9P2R6 1566 aa27.4■■□□□ 1.98
CTSD-203ENST00000429746 C9orf84Q5VXU9 1444 aa27.37■■□□□ 1.97
CTSD-203ENST00000429746 MIA2Q96PC5 1412 aa27.37■■□□□ 1.97
CTSD-203ENST00000429746 ARID4BQ4LE39 1312 aaPredicted RBP27.37■■□□□ 1.97
CTSD-203ENST00000429746 ARHGEF5Q12774 1597 aa27.35■■□□□ 1.97
CTSD-203ENST00000429746 ATP7AQ04656 1500 aa27.35■■□□□ 1.97
CTSD-203ENST00000429746 APLP2Q06481 763 aa27.33■■□□□ 1.97
CTSD-203ENST00000429746 PTPRMP28827 1452 aa27.31■■□□□ 1.96
CTSD-203ENST00000429746 CCDC141Q6ZP82 1450 aa27.31■■□□□ 1.96
CTSD-203ENST00000429746 MADDQ8WXG6 1647 aa27.3■■□□□ 1.96
CTSD-203ENST00000429746 PLXNC1O60486 1568 aa27.29■■□□□ 1.96
CTSD-203ENST00000429746 AGLP35573 1532 aa27.28■■□□□ 1.96
CTSD-203ENST00000429746 SPAG9O60271 1321 aaKnown RBP27.28■■□□□ 1.96
CTSD-203ENST00000429746 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
CTSD-203ENST00000429746 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
CTSD-203ENST00000429746 FGD6Q6ZV73 1430 aa27.27■■□□□ 1.96
CTSD-203ENST00000429746 RTEL1-TNFRSF6BF6WH68 1400 aa27.25■■□□□ 1.95
CTSD-203ENST00000429746 ADGBQ8N7X0 1667 aa27.24■■□□□ 1.95
CTSD-203ENST00000429746 MAST1Q9Y2H9 1570 aa27.23■■□□□ 1.95
CTSD-203ENST00000429746 CROCC2H7BZ55 1655 aa27.19■■□□□ 1.94
CTSD-203ENST00000429746 RIMS1Q86UR5 1692 aaKnown RBP27.19■■□□□ 1.94
CTSD-203ENST00000429746 FER1L4A9Z1Z3 1794 aa27.18■■□□□ 1.94
CTSD-203ENST00000429746 A2MP01023 1474 aa27.18■■□□□ 1.94
CTSD-203ENST00000429746 RSPH4AQ5TD94 716 aa27.17■■□□□ 1.94
CTSD-203ENST00000429746 DNMT1P26358 1616 aaKnown RBP27.16■■□□□ 1.94
CTSD-203ENST00000429746 ABCC5O15440 1437 aa27.16■■□□□ 1.94
CTSD-203ENST00000429746 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
CTSD-203ENST00000429746 SHANK2Q9UPX8 1470 aa27.12■■□□□ 1.93
CTSD-203ENST00000429746 DAPK1P53355 1430 aa27.1■■□□□ 1.93
CTSD-203ENST00000429746 MLECQ14165 292 aa27.1■■□□□ 1.93
CTSD-203ENST00000429746 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
CTSD-203ENST00000429746 PPARGC1BQ86YN6 1023 aaKnown RBP27.08■■□□□ 1.93
CTSD-203ENST00000429746 SETD1BQ9UPS6 1966 aaKnown RBP27.02■■□□□ 1.92
CTSD-203ENST00000429746 TSPY4P0CV99 314 aa27.02■■□□□ 1.92
CTSD-203ENST00000429746 TSPY10P0CW01 314 aa27.02■■□□□ 1.92
CTSD-203ENST00000429746 LMTK3Q96Q04 1460 aa27■■□□□ 1.91
CTSD-203ENST00000429746 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
CTSD-203ENST00000429746 C3P01024 1663 aa26.99■■□□□ 1.91
CTSD-203ENST00000429746 MROH2AA6NES4 1674 aa26.98■■□□□ 1.91
CTSD-203ENST00000429746 ADGRL2O95490 1459 aa26.97■■□□□ 1.91
CTSD-203ENST00000429746 MROH1Q8NDA8 1641 aa26.97■■□□□ 1.91
CTSD-203ENST00000429746 RNF17Q9BXT8 1623 aaKnown RBP26.97■■□□□ 1.91
CTSD-203ENST00000429746 EIF2AK4Q9P2K8 1649 aaKnown RBP26.97■■□□□ 1.91
CTSD-203ENST00000429746 DUOX2Q9NRD8 1548 aa26.95■■□□□ 1.91
CTSD-203ENST00000429746 CLTCQ00610 1675 aaKnown RBP26.95■■□□□ 1.9
CTSD-203ENST00000429746 NCOA1Q15788 1441 aa26.93■■□□□ 1.9
CTSD-203ENST00000429746 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
CTSD-203ENST00000429746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.93■■□□□ 1.9
CTSD-203ENST00000429746 KIF15Q9NS87 1388 aa26.92■■□□□ 1.9
CTSD-203ENST00000429746 CNTLNQ9NXG0 1405 aa26.91■■□□□ 1.9
CTSD-203ENST00000429746 FAM50AQ14320 339 aaKnown RBP26.91■■□□□ 1.9
CTSD-203ENST00000429746 CEBPAP49715 358 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms