RNA–Protein interactions for RNA: ENST00000428956.6

C4A-243, Transcript of complement C4A (Rodgers blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C4A, Length 5,460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-243ENST00000428956 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
C4A-243ENST00000428956 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
C4A-243ENST00000428956 RCAN3Q9UKA8 241 aa20.13■□□□□ 0.81
C4A-243ENST00000428956 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
C4A-243ENST00000428956 GOLGA6L6A8MZA4 724 aa20.13■□□□□ 0.81
C4A-243ENST00000428956 DEKP35659 375 aaKnown RBP20.13■□□□□ 0.81
C4A-243ENST00000428956 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
C4A-243ENST00000428956 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
C4A-243ENST00000428956 IPO8O15397 1037 aaKnown RBP20.11■□□□□ 0.81
C4A-243ENST00000428956 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
C4A-243ENST00000428956 MCCP23508 829 aa20.1■□□□□ 0.81
C4A-243ENST00000428956 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
C4A-243ENST00000428956 NRDCO43847 1150 aa20.09■□□□□ 0.81
C4A-243ENST00000428956 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
C4A-243ENST00000428956 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
C4A-243ENST00000428956 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
C4A-243ENST00000428956 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
C4A-243ENST00000428956 EIF3AQ14152 1382 aaKnown RBP20.05■□□□□ 0.8
C4A-243ENST00000428956 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
C4A-243ENST00000428956 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
C4A-243ENST00000428956 TSHZ2Q9NRE2 1034 aa20.03■□□□□ 0.8
C4A-243ENST00000428956 NUP155O75694 1391 aa20.03■□□□□ 0.8
C4A-243ENST00000428956 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.79
C4A-243ENST00000428956 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
C4A-243ENST00000428956 GBP4Q96PP9 640 aa20.01■□□□□ 0.79
C4A-243ENST00000428956 KCNJ4P48050 445 aa20.01■□□□□ 0.79
C4A-243ENST00000428956 RSPH4AQ5TD94 716 aa20.01■□□□□ 0.79
C4A-243ENST00000428956 MSNP26038 577 aaKnown RBP20■□□□□ 0.79
C4A-243ENST00000428956 CHAF1AQ13111 956 aaPredicted RBP20■□□□□ 0.79
C4A-243ENST00000428956 HDGFL2Q7Z4V5 671 aaPredicted RBP20■□□□□ 0.79
C4A-243ENST00000428956 NLRP13Q86W25 1043 aa20■□□□□ 0.79
C4A-243ENST00000428956 FGD1P98174 961 aa20■□□□□ 0.79
C4A-243ENST00000428956 GOLGA6L4A6NEF3 574 aa19.99■□□□□ 0.79
C4A-243ENST00000428956 RTN4Q9NQC3 1192 aaKnown RBP19.99■□□□□ 0.79
C4A-243ENST00000428956 IPO9Q96P70 1041 aaKnown RBP19.98■□□□□ 0.79
C4A-243ENST00000428956 A0A0G2JS52 829 aa19.98■□□□□ 0.79
C4A-243ENST00000428956 DHX57Q6P158 1386 aaKnown RBP19.97■□□□□ 0.79
C4A-243ENST00000428956 CCDC18Q5T9S5 1454 aa19.97■□□□□ 0.79
C4A-243ENST00000428956 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
C4A-243ENST00000428956 L3MBTL2Q969R5 705 aa19.96■□□□□ 0.79
C4A-243ENST00000428956 WIZO95785 1651 aa19.96■□□□□ 0.79
C4A-243ENST00000428956 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
C4A-243ENST00000428956 FOXD1Q16676 465 aa19.95■□□□□ 0.78
C4A-243ENST00000428956 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
C4A-243ENST00000428956 GOLGA2Q08379 1002 aa19.94■□□□□ 0.78
C4A-243ENST00000428956 KIF15Q9NS87 1388 aa19.93■□□□□ 0.78
C4A-243ENST00000428956 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
C4A-243ENST00000428956 PLEKHG5O94827 1062 aa19.91■□□□□ 0.78
C4A-243ENST00000428956 U2AF1L5P0DN76 240 aaPredicted RBP19.9■□□□□ 0.78
C4A-243ENST00000428956 U2AF1Q01081 240 aaKnown RBP eCLIP19.9■□□□□ 0.78
C4A-243ENST00000428956 TPRNQ4KMQ1 711 aa19.9■□□□□ 0.78
C4A-243ENST00000428956 USP35Q9P2H5 1018 aa19.88■□□□□ 0.77
C4A-243ENST00000428956 MYBBP1AQ9BQG0 1328 aaKnown RBP19.88■□□□□ 0.77
C4A-243ENST00000428956 FHOD3Q2V2M9 1422 aa19.88■□□□□ 0.77
C4A-243ENST00000428956 ITPRIPQ8IWB1 547 aa19.86■□□□□ 0.77
C4A-243ENST00000428956 CADPSQ9ULU8 1353 aa19.86■□□□□ 0.77
C4A-243ENST00000428956 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
C4A-243ENST00000428956 SYAP1Q96A49 352 aaPredicted RBP19.86■□□□□ 0.77
C4A-243ENST00000428956 KIAA1211Q6ZU35 1233 aa19.86■□□□□ 0.77
C4A-243ENST00000428956 CENPJQ9HC77 1338 aaPredicted RBP19.83■□□□□ 0.76
C4A-243ENST00000428956 HTATSF1O43719 755 aaKnown RBP19.83■□□□□ 0.76
C4A-243ENST00000428956 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.76
C4A-243ENST00000428956 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.76
C4A-243ENST00000428956 HDAC5Q9UQL6 1122 aa19.83■□□□□ 0.76
C4A-243ENST00000428956 TERF2IPQ9NYB0 399 aa19.82■□□□□ 0.76
C4A-243ENST00000428956 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
C4A-243ENST00000428956 KIAA2012Q0VF49 1180 aa19.81■□□□□ 0.76
C4A-243ENST00000428956 GGT6Q6P531 493 aa19.81■□□□□ 0.76
C4A-243ENST00000428956 GOLGA6L3A6NEY3 463 aa19.8■□□□□ 0.76
C4A-243ENST00000428956 HMMRO75330 724 aa19.8■□□□□ 0.76
C4A-243ENST00000428956 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
C4A-243ENST00000428956 NAP1L2Q9ULW6 460 aaPredicted RBP19.8■□□□□ 0.76
C4A-243ENST00000428956 LMOD3Q0VAK6 560 aa19.8■□□□□ 0.76
C4A-243ENST00000428956 CENPQQ7L2Z9 268 aaPredicted RBP19.79■□□□□ 0.76
C4A-243ENST00000428956 SMC4Q9NTJ3 1288 aa19.79■□□□□ 0.76
C4A-243ENST00000428956 MLECQ14165 292 aa19.79■□□□□ 0.76
C4A-243ENST00000428956 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
C4A-243ENST00000428956 SLKQ9H2G2 1235 aaPredicted RBP19.78■□□□□ 0.76
C4A-243ENST00000428956 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
C4A-243ENST00000428956 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
C4A-243ENST00000428956 DRC7Q8IY82 874 aa19.78■□□□□ 0.76
C4A-243ENST00000428956 SMARCA4P51532 1647 aa19.78■□□□□ 0.76
C4A-243ENST00000428956 NGEFQ8N5V2 710 aa19.77■□□□□ 0.75
C4A-243ENST00000428956 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.75
C4A-243ENST00000428956 SPAG9O60271 1321 aaKnown RBP19.76■□□□□ 0.75
C4A-243ENST00000428956 STK26Q9P289 416 aa19.76■□□□□ 0.75
C4A-243ENST00000428956 UACAQ9BZF9 1416 aa19.75■□□□□ 0.75
C4A-243ENST00000428956 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
C4A-243ENST00000428956 CSPP1Q1MSJ5 1256 aa19.74■□□□□ 0.75
C4A-243ENST00000428956 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
C4A-243ENST00000428956 MFAP1P55081 439 aaKnown RBP19.73■□□□□ 0.75
C4A-243ENST00000428956 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
C4A-243ENST00000428956 FAM161AQ3B820 660 aa19.72■□□□□ 0.75
C4A-243ENST00000428956 GPATCH3Q96I76 525 aa19.71■□□□□ 0.75
C4A-243ENST00000428956 HNRNPMP52272 730 aaKnown RBP eCLIP19.7■□□□□ 0.74
C4A-243ENST00000428956 DDX11L8A8MPP1 907 aa19.7■□□□□ 0.74
C4A-243ENST00000428956 E9PSI1 815 aa19.7■□□□□ 0.74
C4A-243ENST00000428956 KIF3BO15066 747 aa19.7■□□□□ 0.74
C4A-243ENST00000428956 RRP1P56182 461 aaKnown RBP19.7■□□□□ 0.74
C4A-243ENST00000428956 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms