RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KDM6BO15054 1643 aa22.61■■□□□ 1.21
SGCE-204ENST00000428696 AKNAQ7Z591 1439 aa22.59■■□□□ 1.21
SGCE-204ENST00000428696 NCOA2Q15596 1464 aa22.58■■□□□ 1.2
SGCE-204ENST00000428696 NEO1Q92859 1461 aa22.58■■□□□ 1.2
SGCE-204ENST00000428696 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.2
SGCE-204ENST00000428696 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
SGCE-204ENST00000428696 MYO5CQ9NQX4 1742 aa22.57■■□□□ 1.2
SGCE-204ENST00000428696 GPATCH8Q9UKJ3 1502 aaKnown RBP22.57■■□□□ 1.2
SGCE-204ENST00000428696 COL17A1Q9UMD9 1497 aaPredicted RBP22.57■■□□□ 1.2
SGCE-204ENST00000428696 SUPT6HQ7KZ85 1726 aaKnown RBP22.54■■□□□ 1.2
SGCE-204ENST00000428696 SCAPERQ9BY12 1400 aa22.54■■□□□ 1.2
SGCE-204ENST00000428696 ZNF644Q9H582 1327 aaPredicted RBP22.52■■□□□ 1.2
SGCE-204ENST00000428696 ADGRL1O94910 1474 aa22.52■■□□□ 1.2
SGCE-204ENST00000428696 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.25e-8■■■■■ 27.1
SGCE-204ENST00000428696 DENND4BO75064 1496 aaPredicted RBP22.5■■□□□ 1.19
SGCE-204ENST00000428696 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
SGCE-204ENST00000428696 ARAP3Q8WWN8 1544 aa22.49■■□□□ 1.19
SGCE-204ENST00000428696 AFAP1Q8N556 730 aa22.48■■□□□ 1.19
SGCE-204ENST00000428696 PREX2Q70Z35 1606 aa22.48■■□□□ 1.19
SGCE-204ENST00000428696 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
SGCE-204ENST00000428696 CDC42BPBQ9Y5S2 1711 aa22.48■■□□□ 1.19
SGCE-204ENST00000428696 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
SGCE-204ENST00000428696 ITSN2Q9NZM3 1697 aa22.4■■□□□ 1.18
SGCE-204ENST00000428696 FAM50AQ14320 339 aaKnown RBP22.4■■□□□ 1.18
SGCE-204ENST00000428696 TRAPPC8Q9Y2L5 1435 aa22.38■■□□□ 1.17
SGCE-204ENST00000428696 SAMD9LQ8IVG5 1584 aa22.38■■□□□ 1.17
SGCE-204ENST00000428696 POGZQ7Z3K3 1410 aa22.38■■□□□ 1.17
SGCE-204ENST00000428696 PLEKHH2Q8IVE3 1493 aa22.37■■□□□ 1.17
SGCE-204ENST00000428696 ARHGEF12Q9NZN5 1544 aa22.37■■□□□ 1.17
SGCE-204ENST00000428696 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
SGCE-204ENST00000428696 SYCP2Q9BX26 1530 aa22.36■■□□□ 1.17
SGCE-204ENST00000428696 ABCC1P33527 1531 aa22.35■■□□□ 1.17
SGCE-204ENST00000428696 ARID4BQ4LE39 1312 aaPredicted RBP22.35■■□□□ 1.17
SGCE-204ENST00000428696 CAMSAP2Q08AD1 1489 aa22.34■■□□□ 1.17
SGCE-204ENST00000428696 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
SGCE-204ENST00000428696 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
SGCE-204ENST00000428696 KIAA1107Q9UPP5 1409 aa22.34■■□□□ 1.17
SGCE-204ENST00000428696 TSPY4P0CV99 314 aa22.32■■□□□ 1.16
SGCE-204ENST00000428696 TSPY10P0CW01 314 aa22.32■■□□□ 1.16
SGCE-204ENST00000428696 FRMPD1Q5SYB0 1578 aa22.32■■□□□ 1.16
SGCE-204ENST00000428696 FGD6Q6ZV73 1430 aa22.31■■□□□ 1.16
SGCE-204ENST00000428696 RICTORQ6R327 1708 aa22.31■■□□□ 1.16
SGCE-204ENST00000428696 FOXD1Q16676 465 aa22.31■■□□□ 1.16
SGCE-204ENST00000428696 RSPH4AQ5TD94 716 aa22.31■■□□□ 1.16
SGCE-204ENST00000428696 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
SGCE-204ENST00000428696 ITGAEP38570 1179 aa22.28■■□□□ 1.16
SGCE-204ENST00000428696 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
SGCE-204ENST00000428696 ZFYVE16Q7Z3T8 1539 aa22.25■■□□□ 1.15
SGCE-204ENST00000428696 MAGI2Q86UL8 1455 aa22.24■■□□□ 1.15
SGCE-204ENST00000428696 POTEDQ86YR6 584 aa22.24■■□□□ 1.15
SGCE-204ENST00000428696 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
SGCE-204ENST00000428696 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
SGCE-204ENST00000428696 MLECQ14165 292 aa22.23■■□□□ 1.15
SGCE-204ENST00000428696 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
SGCE-204ENST00000428696 ZMYM4Q5VZL5 1548 aa22.22■■□□□ 1.15
SGCE-204ENST00000428696 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
SGCE-204ENST00000428696 KDM5CP41229 1560 aa22.2■■□□□ 1.14
SGCE-204ENST00000428696 ATP10AO60312 1499 aa22.2■■□□□ 1.14
SGCE-204ENST00000428696 HECW2Q9P2P5 1572 aa22.19■■□□□ 1.14
SGCE-204ENST00000428696 TCOF1Q13428 1488 aaKnown RBP22.17■■□□□ 1.14
SGCE-204ENST00000428696 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
SGCE-204ENST00000428696 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
SGCE-204ENST00000428696 ABCC5O15440 1437 aa22.15■■□□□ 1.14
SGCE-204ENST00000428696 ATP7AQ04656 1500 aa22.15■■□□□ 1.14
SGCE-204ENST00000428696 ARHGEF5Q12774 1597 aa22.14■■□□□ 1.14
SGCE-204ENST00000428696 DAPK1P53355 1430 aa22.14■■□□□ 1.13
SGCE-204ENST00000428696 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.13
SGCE-204ENST00000428696 KIDINS220Q9ULH0 1771 aa22.12■■□□□ 1.13
SGCE-204ENST00000428696 RTEL1-TNFRSF6BF6WH68 1400 aa22.12■■□□□ 1.13
SGCE-204ENST00000428696 KDM4FA0A1W2PPD8 638 aa22.11■■□□□ 1.13
SGCE-204ENST00000428696 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
SGCE-204ENST00000428696 DIP2CQ9Y2E4 1556 aa22.1■■□□□ 1.13
SGCE-204ENST00000428696 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
SGCE-204ENST00000428696 GGT6Q6P531 493 aa22.09■■□□□ 1.13
SGCE-204ENST00000428696 ESF1Q9H501 851 aaKnown RBP22.08■■□□□ 1.13
SGCE-204ENST00000428696 A2MP01023 1474 aa22.08■■□□□ 1.13
SGCE-204ENST00000428696 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.12
SGCE-204ENST00000428696 KIF3BO15066 747 aa22.07■■□□□ 1.12
SGCE-204ENST00000428696 ANKRD30AQ9BXX3 1397 aa22.06■■□□□ 1.12
SGCE-204ENST00000428696 DNMT1P26358 1616 aaKnown RBP22.05■■□□□ 1.12
SGCE-204ENST00000428696 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
SGCE-204ENST00000428696 DHX29Q7Z478 1369 aaKnown RBP22.04■■□□□ 1.12
SGCE-204ENST00000428696 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
SGCE-204ENST00000428696 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.02■■□□□ 1.12
SGCE-204ENST00000428696 PTPRKQ15262 1439 aa22.01■■□□□ 1.11
SGCE-204ENST00000428696 SHANK2Q9UPX8 1470 aa22■■□□□ 1.11
SGCE-204ENST00000428696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.99■■□□□ 1.11
SGCE-204ENST00000428696 MAST1Q9Y2H9 1570 aa21.99■■□□□ 1.11
SGCE-204ENST00000428696 SIGLEC1Q9BZZ2 1709 aa21.99■■□□□ 1.11
SGCE-204ENST00000428696 NCOA1Q15788 1441 aa21.98■■□□□ 1.11
SGCE-204ENST00000428696 ADGBQ8N7X0 1667 aa21.97■■□□□ 1.11
SGCE-204ENST00000428696 CROCC2H7BZ55 1655 aa21.96■■□□□ 1.11
SGCE-204ENST00000428696 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
SGCE-204ENST00000428696 AGLP35573 1532 aa21.94■■□□□ 1.1
SGCE-204ENST00000428696 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
SGCE-204ENST00000428696 DUOX2Q9NRD8 1548 aa21.93■■□□□ 1.1
SGCE-204ENST00000428696 WASHC2CQ9Y4E1 1318 aa21.92■■□□□ 1.1
SGCE-204ENST00000428696 CEBPAP49715 358 aaPredicted RBP21.91■■□□□ 1.1
SGCE-204ENST00000428696 PLXNC1O60486 1568 aa21.91■■□□□ 1.1
SGCE-204ENST00000428696 ROCK1Q13464 1354 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms