RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.47
HMGA1P4-201ENST00000428643 FAM50AQ14320 339 aaKnown RBP12.08□□□□□ -0.48
HMGA1P4-201ENST00000428643 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
HMGA1P4-201ENST00000428643 ARAP3Q8WWN8 1544 aa12.07□□□□□ -0.48
HMGA1P4-201ENST00000428643 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
HMGA1P4-201ENST00000428643 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
HMGA1P4-201ENST00000428643 MAP3K4Q9Y6R4 1608 aa12.07□□□□□ -0.48
HMGA1P4-201ENST00000428643 CAMSAP2Q08AD1 1489 aa12.07□□□□□ -0.48
HMGA1P4-201ENST00000428643 EFCAB2Q5VUJ9 269 aa12.06□□□□□ -0.48
HMGA1P4-201ENST00000428643 FANCAO15360 1455 aa12.06□□□□□ -0.48
HMGA1P4-201ENST00000428643 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
HMGA1P4-201ENST00000428643 TCOF1Q13428 1488 aaKnown RBP12.05□□□□□ -0.48
HMGA1P4-201ENST00000428643 ZNF644Q9H582 1327 aaPredicted RBP12.05□□□□□ -0.48
HMGA1P4-201ENST00000428643 PLEKHH2Q8IVE3 1493 aa12.03□□□□□ -0.48
HMGA1P4-201ENST00000428643 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
HMGA1P4-201ENST00000428643 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
HMGA1P4-201ENST00000428643 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
HMGA1P4-201ENST00000428643 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.48
HMGA1P4-201ENST00000428643 CDC42BPBQ9Y5S2 1711 aa12.02□□□□□ -0.49
HMGA1P4-201ENST00000428643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.02□□□□□ -0.49
HMGA1P4-201ENST00000428643 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
HMGA1P4-201ENST00000428643 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
HMGA1P4-201ENST00000428643 NEO1Q92859 1461 aa12.02□□□□□ -0.49
HMGA1P4-201ENST00000428643 ABCC1P33527 1531 aa12.01□□□□□ -0.49
HMGA1P4-201ENST00000428643 ITGAEP38570 1179 aa12.01□□□□□ -0.49
HMGA1P4-201ENST00000428643 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
HMGA1P4-201ENST00000428643 KIAA1107Q9UPP5 1409 aa12□□□□□ -0.49
HMGA1P4-201ENST00000428643 CCDC141Q6ZP82 1450 aa11.98□□□□□ -0.49
HMGA1P4-201ENST00000428643 DAPK1P53355 1430 aa11.98□□□□□ -0.49
HMGA1P4-201ENST00000428643 SCAPERQ9BY12 1400 aa11.98□□□□□ -0.49
HMGA1P4-201ENST00000428643 HNRNPMP52272 730 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGA1P4-201ENST00000428643 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
HMGA1P4-201ENST00000428643 ARHGEF12Q9NZN5 1544 aa11.97□□□□□ -0.49
HMGA1P4-201ENST00000428643 PCGF6Q9BYE7 350 aa11.97□□□□□ -0.49
HMGA1P4-201ENST00000428643 DNMT1P26358 1616 aaKnown RBP11.97□□□□□ -0.49
HMGA1P4-201ENST00000428643 ARHGEF5Q12774 1597 aa11.96□□□□□ -0.49
HMGA1P4-201ENST00000428643 MBD5Q9P267 1494 aa11.96□□□□□ -0.49
HMGA1P4-201ENST00000428643 ABCC5O15440 1437 aa11.96□□□□□ -0.49
HMGA1P4-201ENST00000428643 TSPOAP1O95153 1857 aa11.96□□□□□ -0.49
HMGA1P4-201ENST00000428643 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
HMGA1P4-201ENST00000428643 POGZQ7Z3K3 1410 aa11.95□□□□□ -0.5
HMGA1P4-201ENST00000428643 TRAPPC8Q9Y2L5 1435 aa11.95□□□□□ -0.5
HMGA1P4-201ENST00000428643 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
HMGA1P4-201ENST00000428643 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
HMGA1P4-201ENST00000428643 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
HMGA1P4-201ENST00000428643 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 RSPH4AQ5TD94 716 aa11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 SENP3Q9H4L4 574 aaPredicted RBP11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 CHIC2Q9UKJ5 165 aa11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 PTPRKQ15262 1439 aa11.93□□□□□ -0.5
HMGA1P4-201ENST00000428643 CROCC2H7BZ55 1655 aa11.92□□□□□ -0.5
HMGA1P4-201ENST00000428643 AFAP1Q8N556 730 aa11.92□□□□□ -0.5
HMGA1P4-201ENST00000428643 SPAG9O60271 1321 aaKnown RBP11.91□□□□□ -0.5
HMGA1P4-201ENST00000428643 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
HMGA1P4-201ENST00000428643 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
HMGA1P4-201ENST00000428643 ZFYVE16Q7Z3T8 1539 aa11.9□□□□□ -0.5
HMGA1P4-201ENST00000428643 ANKRD30AQ9BXX3 1397 aa11.9□□□□□ -0.5
HMGA1P4-201ENST00000428643 KDM5CP41229 1560 aa11.89□□□□□ -0.51
HMGA1P4-201ENST00000428643 FRMPD1Q5SYB0 1578 aa11.89□□□□□ -0.51
HMGA1P4-201ENST00000428643 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
HMGA1P4-201ENST00000428643 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
HMGA1P4-201ENST00000428643 MAST1Q9Y2H9 1570 aa11.88□□□□□ -0.51
HMGA1P4-201ENST00000428643 ATP7AQ04656 1500 aa11.88□□□□□ -0.51
HMGA1P4-201ENST00000428643 RRP7BPQ9NSQ0 103 aa11.88□□□□□ -0.51
HMGA1P4-201ENST00000428643 HECW2Q9P2P5 1572 aa11.88□□□□□ -0.51
HMGA1P4-201ENST00000428643 INO80Q9ULG1 1556 aaPredicted RBP11.88□□□□□ -0.51
HMGA1P4-201ENST00000428643 KIF15Q9NS87 1388 aa11.87□□□□□ -0.51
HMGA1P4-201ENST00000428643 COL17A1Q9UMD9 1497 aaPredicted RBP11.87□□□□□ -0.51
HMGA1P4-201ENST00000428643 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
HMGA1P4-201ENST00000428643 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 ZMYM4Q5VZL5 1548 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 KDM6BO15054 1643 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
HMGA1P4-201ENST00000428643 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
HMGA1P4-201ENST00000428643 MLH3Q9UHC1 1453 aa11.85□□□□□ -0.51
HMGA1P4-201ENST00000428643 NAIPQ13075 1403 aa11.84□□□□□ -0.51
HMGA1P4-201ENST00000428643 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
HMGA1P4-201ENST00000428643 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
HMGA1P4-201ENST00000428643 GCC2Q8IWJ2 1684 aa11.82□□□□□ -0.52
HMGA1P4-201ENST00000428643 YEATS2Q9ULM3 1422 aa11.82□□□□□ -0.52
HMGA1P4-201ENST00000428643 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
HMGA1P4-201ENST00000428643 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
HMGA1P4-201ENST00000428643 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
HMGA1P4-201ENST00000428643 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
HMGA1P4-201ENST00000428643 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
HMGA1P4-201ENST00000428643 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
HMGA1P4-201ENST00000428643 DIP2CQ9Y2E4 1556 aa11.8□□□□□ -0.52
HMGA1P4-201ENST00000428643 A2MP01023 1474 aa11.8□□□□□ -0.52
HMGA1P4-201ENST00000428643 ERBINQ96RT1 1412 aa11.79□□□□□ -0.52
HMGA1P4-201ENST00000428643 ATP10AO60312 1499 aa11.77□□□□□ -0.52
HMGA1P4-201ENST00000428643 DHX29Q7Z478 1369 aaKnown RBP11.77□□□□□ -0.53
HMGA1P4-201ENST00000428643 KIF3BO15066 747 aa11.74□□□□□ -0.53
HMGA1P4-201ENST00000428643 TRIM52Q96A61 297 aa11.74□□□□□ -0.53
HMGA1P4-201ENST00000428643 EIF2AK4Q9P2K8 1649 aaKnown RBP11.73□□□□□ -0.53
HMGA1P4-201ENST00000428643 REREQ9P2R6 1566 aa11.73□□□□□ -0.53
HMGA1P4-201ENST00000428643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.53
HMGA1P4-201ENST00000428643 ARID4BQ4LE39 1312 aaPredicted RBP11.71□□□□□ -0.53
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