RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 ARHGAP5Q13017 1502 aa15.08■□□□□ 0.01
TRIM39-208ENST00000428555 MYT1LQ9UL68 1186 aa15.08■□□□□ 0
TRIM39-208ENST00000428555 MTUS2Q5JR59 1369 aa15.08■□□□□ 0
TRIM39-208ENST00000428555 POGZQ7Z3K3 1410 aa15.08■□□□□ 0
TRIM39-208ENST00000428555 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
TRIM39-208ENST00000428555 MLECQ14165 292 aa15.06■□□□□ 0
TRIM39-208ENST00000428555 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
TRIM39-208ENST00000428555 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
TRIM39-208ENST00000428555 MAGI2Q86UL8 1455 aa15.05■□□□□ -0
TRIM39-208ENST00000428555 RICTORQ6R327 1708 aa15.03■□□□□ -0
TRIM39-208ENST00000428555 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
TRIM39-208ENST00000428555 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
TRIM39-208ENST00000428555 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
TRIM39-208ENST00000428555 ARHGEF12Q9NZN5 1544 aa15.02■□□□□ -0
TRIM39-208ENST00000428555 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
TRIM39-208ENST00000428555 ZMYM4Q5VZL5 1548 aa15.02□□□□□ -0.01
TRIM39-208ENST00000428555 ZFYVE16Q7Z3T8 1539 aa15.02□□□□□ -0.01
TRIM39-208ENST00000428555 ATP10AO60312 1499 aa15.01□□□□□ -0.01
TRIM39-208ENST00000428555 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
TRIM39-208ENST00000428555 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
TRIM39-208ENST00000428555 ARHGEF40Q8TER5 1519 aa14.99□□□□□ -0.01
TRIM39-208ENST00000428555 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
TRIM39-208ENST00000428555 CDC42BPBQ9Y5S2 1711 aa14.99□□□□□ -0.01
TRIM39-208ENST00000428555 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
TRIM39-208ENST00000428555 PTPRMP28827 1452 aa14.98□□□□□ -0.01
TRIM39-208ENST00000428555 KANK4Q5T7N3 995 aaPredicted RBP14.97□□□□□ -0.01
TRIM39-208ENST00000428555 SPAG9O60271 1321 aaKnown RBP14.96□□□□□ -0.01
TRIM39-208ENST00000428555 PREX2Q70Z35 1606 aa14.95□□□□□ -0.02
TRIM39-208ENST00000428555 MLH3Q9UHC1 1453 aa14.95□□□□□ -0.02
TRIM39-208ENST00000428555 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
TRIM39-208ENST00000428555 ADAMTSL3P82987 1691 aa14.95□□□□□ -0.02
TRIM39-208ENST00000428555 KIAA1107Q9UPP5 1409 aa14.94□□□□□ -0.02
TRIM39-208ENST00000428555 ABCC1P33527 1531 aa14.94□□□□□ -0.02
TRIM39-208ENST00000428555 BCORL1Q5H9F3 1711 aa14.94□□□□□ -0.02
TRIM39-208ENST00000428555 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
TRIM39-208ENST00000428555 KDM5CP41229 1560 aa14.93□□□□□ -0.02
TRIM39-208ENST00000428555 EHBP1L1Q8N3D4 1523 aa14.92□□□□□ -0.02
TRIM39-208ENST00000428555 SAMD9LQ8IVG5 1584 aa14.91□□□□□ -0.02
TRIM39-208ENST00000428555 NCOA2Q15596 1464 aa14.91□□□□□ -0.02
TRIM39-208ENST00000428555 CEBPAP49715 358 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-208ENST00000428555 APLP2Q06481 763 aa14.91□□□□□ -0.02
TRIM39-208ENST00000428555 SIGLEC1Q9BZZ2 1709 aa14.91□□□□□ -0.02
TRIM39-208ENST00000428555 PLEKHH2Q8IVE3 1493 aa14.9□□□□□ -0.02
TRIM39-208ENST00000428555 MADDQ8WXG6 1647 aa14.9□□□□□ -0.02
TRIM39-208ENST00000428555 SYCP2Q9BX26 1530 aa14.9□□□□□ -0.02
TRIM39-208ENST00000428555 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
TRIM39-208ENST00000428555 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
TRIM39-208ENST00000428555 HECW2Q9P2P5 1572 aa14.87□□□□□ -0.03
TRIM39-208ENST00000428555 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
TRIM39-208ENST00000428555 ESF1Q9H501 851 aaKnown RBP14.87□□□□□ -0.03
TRIM39-208ENST00000428555 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
TRIM39-208ENST00000428555 RSPH4AQ5TD94 716 aa14.86□□□□□ -0.03
TRIM39-208ENST00000428555 ITSN2Q9NZM3 1697 aa14.86□□□□□ -0.03
TRIM39-208ENST00000428555 MAP3K1Q13233 1512 aa14.84□□□□□ -0.03
TRIM39-208ENST00000428555 HSPA2P54652 639 aa14.84□□□□□ -0.03
TRIM39-208ENST00000428555 ABCA6Q8N139 1617 aa14.84□□□□□ -0.03
TRIM39-208ENST00000428555 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
TRIM39-208ENST00000428555 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.03
TRIM39-208ENST00000428555 TSPY4P0CV99 314 aa14.83□□□□□ -0.04
TRIM39-208ENST00000428555 TSPY10P0CW01 314 aa14.83□□□□□ -0.04
TRIM39-208ENST00000428555 GGT6Q6P531 493 aa14.83□□□□□ -0.04
TRIM39-208ENST00000428555 AGLP35573 1532 aa14.82□□□□□ -0.04
TRIM39-208ENST00000428555 SUPT6HQ7KZ85 1726 aaKnown RBP14.81□□□□□ -0.04
TRIM39-208ENST00000428555 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
TRIM39-208ENST00000428555 A2MP01023 1474 aa14.8□□□□□ -0.04
TRIM39-208ENST00000428555 ATP7AQ04656 1500 aa14.8□□□□□ -0.04
TRIM39-208ENST00000428555 RTEL1-TNFRSF6BF6WH68 1400 aa14.79□□□□□ -0.04
TRIM39-208ENST00000428555 CAMSAP2Q08AD1 1489 aa14.79□□□□□ -0.04
TRIM39-208ENST00000428555 LMTK3Q96Q04 1460 aa14.78□□□□□ -0.04
TRIM39-208ENST00000428555 DHX29Q7Z478 1369 aaKnown RBP14.78□□□□□ -0.04
TRIM39-208ENST00000428555 MYOM3Q5VTT5 1437 aa14.77□□□□□ -0.04
TRIM39-208ENST00000428555 KIF3BO15066 747 aa14.77□□□□□ -0.05
TRIM39-208ENST00000428555 CCDC141Q6ZP82 1450 aa14.76□□□□□ -0.05
TRIM39-208ENST00000428555 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
TRIM39-208ENST00000428555 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
TRIM39-208ENST00000428555 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
TRIM39-208ENST00000428555 FER1L4A9Z1Z3 1794 aa14.75□□□□□ -0.05
TRIM39-208ENST00000428555 INO80Q9ULG1 1556 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-208ENST00000428555 CNTLNQ9NXG0 1405 aa14.73□□□□□ -0.05
TRIM39-208ENST00000428555 PLXNC1O60486 1568 aa14.7□□□□□ -0.06
TRIM39-208ENST00000428555 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
TRIM39-208ENST00000428555 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
TRIM39-208ENST00000428555 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
TRIM39-208ENST00000428555 WASHC2CQ9Y4E1 1318 aa14.68□□□□□ -0.06
TRIM39-208ENST00000428555 UHRF1BP1Q6BDS2 1440 aa14.68□□□□□ -0.06
TRIM39-208ENST00000428555 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-208ENST00000428555 CHIC2Q9UKJ5 165 aa14.68□□□□□ -0.06
TRIM39-208ENST00000428555 ABCC5O15440 1437 aa14.67□□□□□ -0.06
TRIM39-208ENST00000428555 FBXO31Q5XUX0 539 aaPredicted RBP14.67□□□□□ -0.06
TRIM39-208ENST00000428555 FGD6Q6ZV73 1430 aa14.66□□□□□ -0.06
TRIM39-208ENST00000428555 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
TRIM39-208ENST00000428555 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
TRIM39-208ENST00000428555 SETD1BQ9UPS6 1966 aaKnown RBP14.64□□□□□ -0.07
TRIM39-208ENST00000428555 NPATQ14207 1427 aa14.64□□□□□ -0.07
TRIM39-208ENST00000428555 PTPRKQ15262 1439 aa14.64□□□□□ -0.07
TRIM39-208ENST00000428555 C3P01024 1663 aa14.64□□□□□ -0.07
TRIM39-208ENST00000428555 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
TRIM39-208ENST00000428555 DAPK1P53355 1430 aa14.61□□□□□ -0.07
TRIM39-208ENST00000428555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRIM39-208ENST00000428555 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms