RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 CUX2O14529 1486 aa12.79□□□□□ -0.36
CLTCL1-202ENST00000427926 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
CLTCL1-202ENST00000427926 IRX6P78412 446 aaPredicted RBP12.78□□□□□ -0.36
CLTCL1-202ENST00000427926 CYB5RLQ6IPT4 315 aa12.78□□□□□ -0.36
CLTCL1-202ENST00000427926 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-202ENST00000427926 SOGA1O94964 1423 aa12.77□□□□□ -0.37
CLTCL1-202ENST00000427926 CCDC88BA6NC98 1476 aa12.76□□□□□ -0.37
CLTCL1-202ENST00000427926 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
CLTCL1-202ENST00000427926 FHAD1B1AJZ9 1412 aa12.76□□□□□ -0.37
CLTCL1-202ENST00000427926 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
CLTCL1-202ENST00000427926 KIF3BO15066 747 aa12.74□□□□□ -0.37
CLTCL1-202ENST00000427926 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
CLTCL1-202ENST00000427926 EVA1CP58658 441 aa12.73□□□□□ -0.37
CLTCL1-202ENST00000427926 CHMP4AQ9BY43 222 aa12.73□□□□□ -0.37
CLTCL1-202ENST00000427926 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
CLTCL1-202ENST00000427926 PTMAP06454 111 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-202ENST00000427926 CHMP3Q9Y3E7 222 aa12.72□□□□□ -0.37
CLTCL1-202ENST00000427926 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
CLTCL1-202ENST00000427926 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
CLTCL1-202ENST00000427926 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
CLTCL1-202ENST00000427926 ABCC8Q09428 1581 aa12.71□□□□□ -0.37
CLTCL1-202ENST00000427926 CADPSQ9ULU8 1353 aa12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 GOLGA6L6A8MZA4 724 aa12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 ANP32EQ9BTT0 268 aa12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
CLTCL1-202ENST00000427926 FRAT2O75474 233 aaPredicted RBP12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 NBR1Q14596 966 aa12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 GOLGA6L4A6NEF3 574 aa12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 AMPHP49418 695 aa12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
CLTCL1-202ENST00000427926 CALD1Q05682 793 aaKnown RBP12.68□□□□□ -0.38
CLTCL1-202ENST00000427926 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
CLTCL1-202ENST00000427926 MCCP23508 829 aa12.68□□□□□ -0.38
CLTCL1-202ENST00000427926 NUTM2DQ5VT03 806 aaPredicted RBP12.67□□□□□ -0.38
CLTCL1-202ENST00000427926 LTV1Q96GA3 475 aaPredicted RBP12.67□□□□□ -0.38
CLTCL1-202ENST00000427926 TDRD9Q8NDG6 1382 aaKnown RBP12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 PKD2Q13563 968 aa12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 PRM3Q9NNZ6 103 aa12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 TERF2IPQ9NYB0 399 aa12.66□□□□□ -0.38
CLTCL1-202ENST00000427926 NRDCO43847 1150 aa12.65□□□□□ -0.38
CLTCL1-202ENST00000427926 RGS3P49796 1198 aa12.65□□□□□ -0.38
CLTCL1-202ENST00000427926 U2AF1L5P0DN76 240 aaPredicted RBP12.64□□□□□ -0.39
CLTCL1-202ENST00000427926 U2AF1Q01081 240 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLTCL1-202ENST00000427926 WIZO95785 1651 aa12.64□□□□□ -0.39
CLTCL1-202ENST00000427926 TOP2AP11388 1531 aaKnown RBP12.64□□□□□ -0.39
CLTCL1-202ENST00000427926 APBB1O00213 710 aa12.63□□□□□ -0.39
CLTCL1-202ENST00000427926 HDAC5Q9UQL6 1122 aa12.63□□□□□ -0.39
CLTCL1-202ENST00000427926 HSP90AB1P08238 724 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-202ENST00000427926 KIAA1211Q6ZU35 1233 aa12.63□□□□□ -0.39
CLTCL1-202ENST00000427926 KRI1Q8N9T8 703 aaKnown RBP12.63□□□□□ -0.39
CLTCL1-202ENST00000427926 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
CLTCL1-202ENST00000427926 SIN3AQ96ST3 1273 aa12.62□□□□□ -0.39
CLTCL1-202ENST00000427926 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
CLTCL1-202ENST00000427926 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-202ENST00000427926 VPS8Q8N3P4 1428 aa12.61□□□□□ -0.39
CLTCL1-202ENST00000427926 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
CLTCL1-202ENST00000427926 NUP155O75694 1391 aa12.6□□□□□ -0.39
CLTCL1-202ENST00000427926 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
CLTCL1-202ENST00000427926 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
CLTCL1-202ENST00000427926 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
CLTCL1-202ENST00000427926 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
CLTCL1-202ENST00000427926 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.39
CLTCL1-202ENST00000427926 CFAP44Q96MT7 982 aa12.58□□□□□ -0.39
CLTCL1-202ENST00000427926 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
CLTCL1-202ENST00000427926 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
CLTCL1-202ENST00000427926 GPATCH3Q96I76 525 aa12.58□□□□□ -0.4
CLTCL1-202ENST00000427926 FAM69CQ0P6D2 419 aa12.58□□□□□ -0.4
CLTCL1-202ENST00000427926 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 FOXD1Q16676 465 aa12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 CTDP1Q9Y5B0 961 aaPredicted RBP12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 ROCK2O75116 1388 aaKnown RBP12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 TRIM34Q9BYJ4 488 aa12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 CHAF1AQ13111 956 aaPredicted RBP12.57□□□□□ -0.4
CLTCL1-202ENST00000427926 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
CLTCL1-202ENST00000427926 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
CLTCL1-202ENST00000427926 SF3B2Q13435 895 aaKnown RBP12.56□□□□□ -0.4
CLTCL1-202ENST00000427926 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
CLTCL1-202ENST00000427926 RSPH4AQ5TD94 716 aa12.56□□□□□ -0.4
CLTCL1-202ENST00000427926 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
CLTCL1-202ENST00000427926 ATF3P18847 181 aa12.55□□□□□ -0.4
CLTCL1-202ENST00000427926 L1TD1Q5T7N2 865 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-202ENST00000427926 MARCH6O60337 910 aa12.54□□□□□ -0.4
CLTCL1-202ENST00000427926 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
CLTCL1-202ENST00000427926 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
CLTCL1-202ENST00000427926 RASSF8Q8NHQ8 419 aa12.54□□□□□ -0.4
CLTCL1-202ENST00000427926 FMN1Q68DA7 1419 aa12.53□□□□□ -0.4
CLTCL1-202ENST00000427926 TTC5Q8N0Z6 440 aa12.53□□□□□ -0.4
CLTCL1-202ENST00000427926 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
CLTCL1-202ENST00000427926 NOL10Q9BSC4 688 aaKnown RBP12.53□□□□□ -0.4
CLTCL1-202ENST00000427926 PSME1Q06323 249 aa12.52□□□□□ -0.4
CLTCL1-202ENST00000427926 SLC4A10Q6U841 1118 aa12.52□□□□□ -0.41
CLTCL1-202ENST00000427926 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
CLTCL1-202ENST00000427926 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms