RNA–Protein interactions for RNA: ENST00000427234.5

ITSN2-207, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-207ENST00000427234 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
ITSN2-207ENST00000427234 KIF14Q15058 1648 aa17.72■□□□□ 0.43
ITSN2-207ENST00000427234 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
ITSN2-207ENST00000427234 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
ITSN2-207ENST00000427234 SCAPERQ9BY12 1400 aa17.7■□□□□ 0.42
ITSN2-207ENST00000427234 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
ITSN2-207ENST00000427234 RICTORQ6R327 1708 aa17.67■□□□□ 0.42
ITSN2-207ENST00000427234 MYO5CQ9NQX4 1742 aa17.66■□□□□ 0.42
ITSN2-207ENST00000427234 POGZQ7Z3K3 1410 aa17.65■□□□□ 0.42
ITSN2-207ENST00000427234 MAGI2Q86UL8 1455 aa17.64■□□□□ 0.41
ITSN2-207ENST00000427234 ARHGAP5Q13017 1502 aa17.64■□□□□ 0.41
ITSN2-207ENST00000427234 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
ITSN2-207ENST00000427234 ARID4BQ4LE39 1312 aaPredicted RBP17.64■□□□□ 0.41
ITSN2-207ENST00000427234 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
ITSN2-207ENST00000427234 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
ITSN2-207ENST00000427234 YEATS2Q9ULM3 1422 aa17.6■□□□□ 0.41
ITSN2-207ENST00000427234 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
ITSN2-207ENST00000427234 ZNF518AQ6AHZ1 1483 aa17.58■□□□□ 0.41
ITSN2-207ENST00000427234 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
ITSN2-207ENST00000427234 CDC42BPBQ9Y5S2 1711 aa17.57■□□□□ 0.4
ITSN2-207ENST00000427234 PREX2Q70Z35 1606 aa17.56■□□□□ 0.4
ITSN2-207ENST00000427234 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
ITSN2-207ENST00000427234 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
ITSN2-207ENST00000427234 ATP10AO60312 1499 aa17.55■□□□□ 0.4
ITSN2-207ENST00000427234 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
ITSN2-207ENST00000427234 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
ITSN2-207ENST00000427234 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
ITSN2-207ENST00000427234 ZNF777Q9ULD5 760 aaPredicted RBP17.53■□□□□ 0.4
ITSN2-207ENST00000427234 KDM5CP41229 1560 aa17.53■□□□□ 0.4
ITSN2-207ENST00000427234 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.4
ITSN2-207ENST00000427234 PTPRMP28827 1452 aa17.52■□□□□ 0.4
ITSN2-207ENST00000427234 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
ITSN2-207ENST00000427234 TRAPPC8Q9Y2L5 1435 aa17.52■□□□□ 0.4
ITSN2-207ENST00000427234 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.39
ITSN2-207ENST00000427234 ABCC1P33527 1531 aa17.52■□□□□ 0.39
ITSN2-207ENST00000427234 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
ITSN2-207ENST00000427234 MLH3Q9UHC1 1453 aa17.5■□□□□ 0.39
ITSN2-207ENST00000427234 VPS8Q8N3P4 1428 aa17.5■□□□□ 0.39
ITSN2-207ENST00000427234 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
ITSN2-207ENST00000427234 PPP4R3CPQ6ZMV5 832 aa17.49■□□□□ 0.39
ITSN2-207ENST00000427234 KIAA1107Q9UPP5 1409 aa17.48■□□□□ 0.39
ITSN2-207ENST00000427234 MLECQ14165 292 aa17.48■□□□□ 0.39
ITSN2-207ENST00000427234 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
ITSN2-207ENST00000427234 PLEKHH2Q8IVE3 1493 aa17.47■□□□□ 0.39
ITSN2-207ENST00000427234 MADDQ8WXG6 1647 aa17.47■□□□□ 0.39
ITSN2-207ENST00000427234 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.39
ITSN2-207ENST00000427234 ITSN2Q9NZM3 1697 aa17.45■□□□□ 0.38
ITSN2-207ENST00000427234 SAMD9LQ8IVG5 1584 aa17.45■□□□□ 0.38
ITSN2-207ENST00000427234 SIGLEC1Q9BZZ2 1709 aa17.45■□□□□ 0.38
ITSN2-207ENST00000427234 SPAG9O60271 1321 aaKnown RBP17.44■□□□□ 0.38
ITSN2-207ENST00000427234 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
ITSN2-207ENST00000427234 DIP2CQ9Y2E4 1556 aa17.43■□□□□ 0.38
ITSN2-207ENST00000427234 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
ITSN2-207ENST00000427234 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
ITSN2-207ENST00000427234 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
ITSN2-207ENST00000427234 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
ITSN2-207ENST00000427234 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
ITSN2-207ENST00000427234 ABCA6Q8N139 1617 aa17.39■□□□□ 0.38
ITSN2-207ENST00000427234 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
ITSN2-207ENST00000427234 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.37
ITSN2-207ENST00000427234 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
ITSN2-207ENST00000427234 AGLP35573 1532 aa17.38■□□□□ 0.37
ITSN2-207ENST00000427234 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
ITSN2-207ENST00000427234 KANK4Q5T7N3 995 aaPredicted RBP17.37■□□□□ 0.37
ITSN2-207ENST00000427234 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
ITSN2-207ENST00000427234 RSPH4AQ5TD94 716 aa17.35■□□□□ 0.37
ITSN2-207ENST00000427234 FER1L4A9Z1Z3 1794 aa17.34■□□□□ 0.37
ITSN2-207ENST00000427234 APLP2Q06481 763 aa17.34■□□□□ 0.37
ITSN2-207ENST00000427234 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
ITSN2-207ENST00000427234 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
ITSN2-207ENST00000427234 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
ITSN2-207ENST00000427234 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
ITSN2-207ENST00000427234 RTEL1-TNFRSF6BF6WH68 1400 aa17.31■□□□□ 0.36
ITSN2-207ENST00000427234 CEBPAP49715 358 aaPredicted RBP17.31■□□□□ 0.36
ITSN2-207ENST00000427234 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
ITSN2-207ENST00000427234 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
ITSN2-207ENST00000427234 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
ITSN2-207ENST00000427234 A2MP01023 1474 aa17.3■□□□□ 0.36
ITSN2-207ENST00000427234 CCDC141Q6ZP82 1450 aa17.29■□□□□ 0.36
ITSN2-207ENST00000427234 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
ITSN2-207ENST00000427234 TSPY4P0CV99 314 aa17.27■□□□□ 0.36
ITSN2-207ENST00000427234 TSPY10P0CW01 314 aa17.27■□□□□ 0.36
ITSN2-207ENST00000427234 MIA2Q96PC5 1412 aa17.27■□□□□ 0.35
ITSN2-207ENST00000427234 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
ITSN2-207ENST00000427234 PLXNC1O60486 1568 aa17.26■□□□□ 0.35
ITSN2-207ENST00000427234 DHX29Q7Z478 1369 aaKnown RBP17.26■□□□□ 0.35
ITSN2-207ENST00000427234 HSPA2P54652 639 aa17.24■□□□□ 0.35
ITSN2-207ENST00000427234 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
ITSN2-207ENST00000427234 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
ITSN2-207ENST00000427234 GGT6Q6P531 493 aa17.23■□□□□ 0.35
ITSN2-207ENST00000427234 ADGBQ8N7X0 1667 aa17.21■□□□□ 0.35
ITSN2-207ENST00000427234 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
ITSN2-207ENST00000427234 UHRF1BP1Q6BDS2 1440 aa17.19■□□□□ 0.34
ITSN2-207ENST00000427234 KIF3BO15066 747 aa17.18■□□□□ 0.34
ITSN2-207ENST00000427234 C3P01024 1663 aa17.17■□□□□ 0.34
ITSN2-207ENST00000427234 PREX1Q8TCU6 1659 aa17.16■□□□□ 0.34
ITSN2-207ENST00000427234 NPATQ14207 1427 aa17.16■□□□□ 0.34
ITSN2-207ENST00000427234 MROH2AA6NES4 1674 aa17.15■□□□□ 0.34
ITSN2-207ENST00000427234 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
ITSN2-207ENST00000427234 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms