RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 GNL2Q13823 731 aaKnown RBP16.01■□□□□ 0.15
HDLBP-214ENST00000427183 APBB1O00213 710 aa16.01■□□□□ 0.15
HDLBP-214ENST00000427183 KCNH8Q96L42 1107 aa16■□□□□ 0.15
HDLBP-214ENST00000427183 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
HDLBP-214ENST00000427183 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
HDLBP-214ENST00000427183 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
HDLBP-214ENST00000427183 KIAA2012Q0VF49 1180 aa15.99■□□□□ 0.15
HDLBP-214ENST00000427183 UNC13AQ9UPW8 1703 aa15.99■□□□□ 0.15
HDLBP-214ENST00000427183 MCCP23508 829 aa15.97■□□□□ 0.15
HDLBP-214ENST00000427183 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
HDLBP-214ENST00000427183 SOX12O15370 315 aa15.96■□□□□ 0.15
HDLBP-214ENST00000427183 SLKQ9H2G2 1235 aaPredicted RBP15.96■□□□□ 0.15
HDLBP-214ENST00000427183 A0A0U1RQG5 324 aaPredicted RBP15.95■□□□□ 0.14
HDLBP-214ENST00000427183 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
HDLBP-214ENST00000427183 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
HDLBP-214ENST00000427183 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
HDLBP-214ENST00000427183 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
HDLBP-214ENST00000427183 CHMP4BQ9H444 224 aaKnown RBP15.93■□□□□ 0.14
HDLBP-214ENST00000427183 POGKQ9P215 609 aa15.92■□□□□ 0.14
HDLBP-214ENST00000427183 MS4A1P11836 297 aa15.9■□□□□ 0.14
HDLBP-214ENST00000427183 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
HDLBP-214ENST00000427183 CREBRFQ8IUR6 639 aa15.89■□□□□ 0.13
HDLBP-214ENST00000427183 PEG3Q9GZU2 1588 aa15.88■□□□□ 0.13
HDLBP-214ENST00000427183 KIF21BO75037 1637 aa15.88■□□□□ 0.13
HDLBP-214ENST00000427183 GOLGA6L1Q8N7Z2 621 aa15.88■□□□□ 0.13
HDLBP-214ENST00000427183 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
HDLBP-214ENST00000427183 GBP4Q96PP9 640 aa15.88■□□□□ 0.13
HDLBP-214ENST00000427183 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
HDLBP-214ENST00000427183 KIAA1211Q6ZU35 1233 aa15.86■□□□□ 0.13
HDLBP-214ENST00000427183 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
HDLBP-214ENST00000427183 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
HDLBP-214ENST00000427183 CUX2O14529 1486 aa15.83■□□□□ 0.12
HDLBP-214ENST00000427183 NCAPD3P42695 1498 aa15.83■□□□□ 0.12
HDLBP-214ENST00000427183 GOLGA6L3A6NEY3 463 aa15.82■□□□□ 0.12
HDLBP-214ENST00000427183 PATL2C9JE40 543 aaKnown RBP15.82■□□□□ 0.12
HDLBP-214ENST00000427183 NOL8Q76FK4 1167 aaKnown RBP15.82■□□□□ 0.12
HDLBP-214ENST00000427183 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
HDLBP-214ENST00000427183 CHMP7Q8WUX9 453 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-214ENST00000427183 ZNF330Q9Y3S2 320 aaPredicted RBP15.8■□□□□ 0.12
HDLBP-214ENST00000427183 TPM4P67936 248 aa15.8■□□□□ 0.12
HDLBP-214ENST00000427183 MFAP1P55081 439 aaKnown RBP15.79■□□□□ 0.12
HDLBP-214ENST00000427183 SAFB2Q14151 953 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDLBP-214ENST00000427183 FOXD4L5Q5VV16 416 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-214ENST00000427183 FOXD4L4Q8WXT5 416 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-214ENST00000427183 SYAP1Q96A49 352 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-214ENST00000427183 CARMIL1Q5VZK9 1371 aa15.77■□□□□ 0.11
HDLBP-214ENST00000427183 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
HDLBP-214ENST00000427183 HMGXB3Q12766 1538 aa15.76■□□□□ 0.11
HDLBP-214ENST00000427183 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
HDLBP-214ENST00000427183 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
HDLBP-214ENST00000427183 HSP90AA2PQ14568 343 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-214ENST00000427183 PTMSP20962 102 aa15.75■□□□□ 0.11
HDLBP-214ENST00000427183 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
HDLBP-214ENST00000427183 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
HDLBP-214ENST00000427183 HTATSF1O43719 755 aaKnown RBP15.75■□□□□ 0.11
HDLBP-214ENST00000427183 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
HDLBP-214ENST00000427183 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
HDLBP-214ENST00000427183 WWC1Q8IX03 1113 aa15.74■□□□□ 0.11
HDLBP-214ENST00000427183 CALD1Q05682 793 aaKnown RBP15.73■□□□□ 0.11
HDLBP-214ENST00000427183 MORC1Q86VD1 984 aa15.73■□□□□ 0.11
HDLBP-214ENST00000427183 SRPK2P78362 688 aaKnown RBP15.73■□□□□ 0.11
HDLBP-214ENST00000427183 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
HDLBP-214ENST00000427183 TRIM6-TRIM34B2RNG4 842 aa15.72■□□□□ 0.11
HDLBP-214ENST00000427183 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
HDLBP-214ENST00000427183 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
HDLBP-214ENST00000427183 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
HDLBP-214ENST00000427183 ERICH3Q5RHP9 1530 aa15.71■□□□□ 0.11
HDLBP-214ENST00000427183 CFDP1Q9UEE9 299 aaPredicted RBP15.71■□□□□ 0.11
HDLBP-214ENST00000427183 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
HDLBP-214ENST00000427183 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.11
HDLBP-214ENST00000427183 TPM3P06753 285 aa15.7■□□□□ 0.1
HDLBP-214ENST00000427183 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
HDLBP-214ENST00000427183 TMF1P82094 1093 aa15.7■□□□□ 0.1
HDLBP-214ENST00000427183 CHMP3Q9Y3E7 222 aa15.7■□□□□ 0.1
HDLBP-214ENST00000427183 KANK4Q5T7N3 995 aaPredicted RBP15.7■□□□□ 0.1
HDLBP-214ENST00000427183 DCAF11Q8TEB1 546 aa15.69■□□□□ 0.1
HDLBP-214ENST00000427183 GORABQ5T7V8 394 aa15.68■□□□□ 0.1
HDLBP-214ENST00000427183 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
HDLBP-214ENST00000427183 RWDD1Q9H446 243 aaPredicted RBP15.67■□□□□ 0.1
HDLBP-214ENST00000427183 IPO8O15397 1037 aaKnown RBP15.67■□□□□ 0.1
HDLBP-214ENST00000427183 CFTRP13569 1480 aa15.67■□□□□ 0.1
HDLBP-214ENST00000427183 FOXD4L6Q3SYB3 417 aaPredicted RBP15.66■□□□□ 0.1
HDLBP-214ENST00000427183 FOXD4L3Q6VB84 417 aaPredicted RBP15.66■□□□□ 0.1
HDLBP-214ENST00000427183 VPS53Q5VIR6 699 aa15.66■□□□□ 0.1
HDLBP-214ENST00000427183 RCAN3Q9UKA8 241 aa15.65■□□□□ 0.1
HDLBP-214ENST00000427183 CALRP27797 417 aaKnown RBP15.65■□□□□ 0.1
HDLBP-214ENST00000427183 ZNF771Q7L3S4 317 aaPredicted RBP15.65■□□□□ 0.1
HDLBP-214ENST00000427183 TOMM22Q9NS69 142 aa15.64■□□□□ 0.09
HDLBP-214ENST00000427183 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
HDLBP-214ENST00000427183 IPO9Q96P70 1041 aaKnown RBP15.63■□□□□ 0.09
HDLBP-214ENST00000427183 STK26Q9P289 416 aa15.63■□□□□ 0.09
HDLBP-214ENST00000427183 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
HDLBP-214ENST00000427183 ZNF592Q92610 1267 aa15.62■□□□□ 0.09
HDLBP-214ENST00000427183 SF3A1Q15459 793 aaKnown RBP15.62■□□□□ 0.09
HDLBP-214ENST00000427183 CLUAP1Q96AJ1 413 aa15.62■□□□□ 0.09
HDLBP-214ENST00000427183 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
HDLBP-214ENST00000427183 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
HDLBP-214ENST00000427183 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.093e-6■□□□□ 11.1
HDLBP-214ENST00000427183 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
HDLBP-214ENST00000427183 CUX1P39880 1505 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms