RNA–Protein interactions for RNA: ENST00000426856.1

CRIM1-203, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-203ENST00000426856 SCAPERQ9BY12 1400 aa25.19■■□□□ 1.62
CRIM1-203ENST00000426856 KIF14Q15058 1648 aa25.19■■□□□ 1.62
CRIM1-203ENST00000426856 MYO5CQ9NQX4 1742 aa25.18■■□□□ 1.62
CRIM1-203ENST00000426856 MAGI2Q86UL8 1455 aa25.18■■□□□ 1.62
CRIM1-203ENST00000426856 LMTK3Q96Q04 1460 aa25.17■■□□□ 1.62
CRIM1-203ENST00000426856 LRRIQ1Q96JM4 1722 aa25.16■■□□□ 1.62
CRIM1-203ENST00000426856 TROQ12816 1431 aaPredicted RBP25.12■■□□□ 1.61
CRIM1-203ENST00000426856 CDK11AQ9UQ88 783 aaPredicted RBP25.1■■□□□ 1.61
CRIM1-203ENST00000426856 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
CRIM1-203ENST00000426856 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.6
CRIM1-203ENST00000426856 MLECQ14165 292 aa25.07■■□□□ 1.6
CRIM1-203ENST00000426856 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
CRIM1-203ENST00000426856 ARHGAP5Q13017 1502 aa25.07■■□□□ 1.6
CRIM1-203ENST00000426856 CLIP1P30622 1438 aa25.05■■□□□ 1.6
CRIM1-203ENST00000426856 ATP10AO60312 1499 aa25.05■■□□□ 1.6
CRIM1-203ENST00000426856 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
CRIM1-203ENST00000426856 ZNF518AQ6AHZ1 1483 aa25.02■■□□□ 1.6
CRIM1-203ENST00000426856 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
CRIM1-203ENST00000426856 KDM5CP41229 1560 aa25.02■■□□□ 1.6
CRIM1-203ENST00000426856 CDC42BPBQ9Y5S2 1711 aa25.01■■□□□ 1.59
CRIM1-203ENST00000426856 HSPA2P54652 639 aa25.01■■□□□ 1.59
CRIM1-203ENST00000426856 CASKIN1Q8WXD9 1431 aa24.99■■□□□ 1.59
CRIM1-203ENST00000426856 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
CRIM1-203ENST00000426856 FBXO41Q8TF61 875 aa24.98■■□□□ 1.59
CRIM1-203ENST00000426856 PREX2Q70Z35 1606 aa24.97■■□□□ 1.59
CRIM1-203ENST00000426856 CCDC18Q5T9S5 1454 aa24.96■■□□□ 1.59
CRIM1-203ENST00000426856 DIP2CQ9Y2E4 1556 aa24.95■■□□□ 1.58
CRIM1-203ENST00000426856 ABCC1P33527 1531 aa24.92■■□□□ 1.58
CRIM1-203ENST00000426856 ABCA6Q8N139 1617 aa24.92■■□□□ 1.58
CRIM1-203ENST00000426856 TRAPPC8Q9Y2L5 1435 aa24.9■■□□□ 1.58
CRIM1-203ENST00000426856 ITSN2Q9NZM3 1697 aa24.9■■□□□ 1.58
CRIM1-203ENST00000426856 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.58
CRIM1-203ENST00000426856 CDC42BPAQ5VT25 1732 aa24.89■■□□□ 1.58
CRIM1-203ENST00000426856 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
CRIM1-203ENST00000426856 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
CRIM1-203ENST00000426856 CEBPAP49715 358 aaPredicted RBP24.88■■□□□ 1.57
CRIM1-203ENST00000426856 MYT1LQ9UL68 1186 aa24.88■■□□□ 1.57
CRIM1-203ENST00000426856 PREX1Q8TCU6 1659 aa24.88■■□□□ 1.57
CRIM1-203ENST00000426856 KIDINS220Q9ULH0 1771 aa24.82■■□□□ 1.56
CRIM1-203ENST00000426856 AGLP35573 1532 aa24.81■■□□□ 1.56
CRIM1-203ENST00000426856 SAMD9LQ8IVG5 1584 aa24.8■■□□□ 1.56
CRIM1-203ENST00000426856 C3P01024 1663 aa24.78■■□□□ 1.56
CRIM1-203ENST00000426856 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
CRIM1-203ENST00000426856 SYCP2Q9BX26 1530 aa24.76■■□□□ 1.55
CRIM1-203ENST00000426856 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
CRIM1-203ENST00000426856 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
CRIM1-203ENST00000426856 UHRF1BP1Q6BDS2 1440 aa24.74■■□□□ 1.55
CRIM1-203ENST00000426856 SETD1BQ9UPS6 1966 aaKnown RBP24.74■■□□□ 1.55
CRIM1-203ENST00000426856 CERKQ8TCT0 537 aa24.7■■□□□ 1.54
CRIM1-203ENST00000426856 HNRNPMP52272 730 aaKnown RBP eCLIP24.67■■□□□ 1.548e-7■■■□□ 18.5
CRIM1-203ENST00000426856 ESF1Q9H501 851 aaKnown RBP24.66■■□□□ 1.54
CRIM1-203ENST00000426856 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
CRIM1-203ENST00000426856 SPAG9O60271 1321 aaKnown RBP24.65■■□□□ 1.54
CRIM1-203ENST00000426856 CNTLNQ9NXG0 1405 aa24.65■■□□□ 1.54
CRIM1-203ENST00000426856 INO80Q9ULG1 1556 aaPredicted RBP24.65■■□□□ 1.54
CRIM1-203ENST00000426856 SUPT6HQ7KZ85 1726 aaKnown RBP24.64■■□□□ 1.54
CRIM1-203ENST00000426856 KIAA1107Q9UPP5 1409 aa24.64■■□□□ 1.54
CRIM1-203ENST00000426856 CFDP1Q9UEE9 299 aaPredicted RBP24.64■■□□□ 1.54
CRIM1-203ENST00000426856 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.53
CRIM1-203ENST00000426856 CCNB3Q8WWL7 1395 aa24.64■■□□□ 1.53
CRIM1-203ENST00000426856 PLEKHH2Q8IVE3 1493 aa24.63■■□□□ 1.53
CRIM1-203ENST00000426856 PLXNC1O60486 1568 aa24.62■■□□□ 1.53
CRIM1-203ENST00000426856 MROH2AA6NES4 1674 aa24.61■■□□□ 1.53
CRIM1-203ENST00000426856 TIAM1Q13009 1591 aa24.6■■□□□ 1.53
CRIM1-203ENST00000426856 DMRT2Q9Y5R5 561 aa24.6■■□□□ 1.53
CRIM1-203ENST00000426856 EHBP1L1Q8N3D4 1523 aa24.57■■□□□ 1.52
CRIM1-203ENST00000426856 A2MP01023 1474 aa24.57■■□□□ 1.52
CRIM1-203ENST00000426856 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
CRIM1-203ENST00000426856 PTPRTO14522 1441 aa24.55■■□□□ 1.52
CRIM1-203ENST00000426856 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
CRIM1-203ENST00000426856 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
CRIM1-203ENST00000426856 NPATQ14207 1427 aa24.54■■□□□ 1.52
CRIM1-203ENST00000426856 NCOA1Q15788 1441 aa24.53■■□□□ 1.52
CRIM1-203ENST00000426856 CEP162Q5TB80 1403 aa24.53■■□□□ 1.52
CRIM1-203ENST00000426856 MBD5Q9P267 1494 aa24.51■■□□□ 1.51
CRIM1-203ENST00000426856 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
CRIM1-203ENST00000426856 CAMSAP1Q5T5Y3 1602 aa24.49■■□□□ 1.51
CRIM1-203ENST00000426856 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
CRIM1-203ENST00000426856 LTBP4Q8N2S1 1624 aa24.46■■□□□ 1.51
CRIM1-203ENST00000426856 GGT6Q6P531 493 aa24.46■■□□□ 1.51
CRIM1-203ENST00000426856 PTPRKQ15262 1439 aa24.45■■□□□ 1.51
CRIM1-203ENST00000426856 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
CRIM1-203ENST00000426856 RTEL1-TNFRSF6BF6WH68 1400 aa24.43■■□□□ 1.5
CRIM1-203ENST00000426856 NCOA2Q15596 1464 aa24.42■■□□□ 1.5
CRIM1-203ENST00000426856 CEP170BQ9Y4F5 1589 aaPredicted RBP24.42■■□□□ 1.5
CRIM1-203ENST00000426856 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.5
CRIM1-203ENST00000426856 CCDC141Q6ZP82 1450 aa24.38■■□□□ 1.49
CRIM1-203ENST00000426856 NCKAP5LQ9HCH0 1330 aa24.38■■□□□ 1.49
CRIM1-203ENST00000426856 DHX29Q7Z478 1369 aaKnown RBP24.38■■□□□ 1.49
CRIM1-203ENST00000426856 PPP6R1Q9UPN7 881 aa24.37■■□□□ 1.49
CRIM1-203ENST00000426856 PLA2R1Q13018 1463 aa24.36■■□□□ 1.49
CRIM1-203ENST00000426856 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
CRIM1-203ENST00000426856 IQSEC2Q5JU85 1478 aa24.33■■□□□ 1.49
CRIM1-203ENST00000426856 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
CRIM1-203ENST00000426856 KIF3BO15066 747 aa24.3■■□□□ 1.48
CRIM1-203ENST00000426856 ARHGEF5Q12774 1597 aa24.29■■□□□ 1.48
CRIM1-203ENST00000426856 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
CRIM1-203ENST00000426856 PKD2Q13563 968 aa24.29■■□□□ 1.48
CRIM1-203ENST00000426856 A2ML1A8K2U0 1454 aa24.29■■□□□ 1.48
CRIM1-203ENST00000426856 KDM5DQ9BY66 1539 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms