RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
LINC01049-201ENST00000426840 NPM1P06748 294 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC01049-201ENST00000426840 CLIP1P30622 1438 aa11.93□□□□□ -0.5
LINC01049-201ENST00000426840 ABCA8O94911 1581 aa11.92□□□□□ -0.5
LINC01049-201ENST00000426840 ABCC2Q92887 1545 aa11.91□□□□□ -0.5
LINC01049-201ENST00000426840 CEP162Q5TB80 1403 aa11.9□□□□□ -0.5
LINC01049-201ENST00000426840 KDM5BQ9UGL1 1544 aa11.89□□□□□ -0.51
LINC01049-201ENST00000426840 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
LINC01049-201ENST00000426840 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
LINC01049-201ENST00000426840 CREBZFQ9NS37 354 aa11.86□□□□□ -0.51
LINC01049-201ENST00000426840 ATP10BO94823 1461 aa11.86□□□□□ -0.51
LINC01049-201ENST00000426840 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
LINC01049-201ENST00000426840 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
LINC01049-201ENST00000426840 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
LINC01049-201ENST00000426840 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
LINC01049-201ENST00000426840 ZCCHC11Q5TAX3 1644 aaKnown RBP11.83□□□□□ -0.52
LINC01049-201ENST00000426840 ATP1B4Q9UN42 357 aaPredicted RBP11.83□□□□□ -0.52
LINC01049-201ENST00000426840 ASXL2Q76L83 1435 aa11.83□□□□□ -0.52
LINC01049-201ENST00000426840 MIER1Q8N108 512 aa11.82□□□□□ -0.52
LINC01049-201ENST00000426840 CASKIN1Q8WXD9 1431 aa11.81□□□□□ -0.52
LINC01049-201ENST00000426840 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
LINC01049-201ENST00000426840 PLCD3Q8N3E9 789 aa11.8□□□□□ -0.52
LINC01049-201ENST00000426840 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
LINC01049-201ENST00000426840 EPRSP07814 1512 aaKnown RBP11.78□□□□□ -0.52
LINC01049-201ENST00000426840 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
LINC01049-201ENST00000426840 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
LINC01049-201ENST00000426840 CDK13Q14004 1512 aaKnown RBP11.77□□□□□ -0.52
LINC01049-201ENST00000426840 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
LINC01049-201ENST00000426840 HECW1Q76N89 1606 aa11.77□□□□□ -0.53
LINC01049-201ENST00000426840 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
LINC01049-201ENST00000426840 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
LINC01049-201ENST00000426840 VPS8Q8N3P4 1428 aa11.76□□□□□ -0.53
LINC01049-201ENST00000426840 FYCO1Q9BQS8 1478 aa11.76□□□□□ -0.53
LINC01049-201ENST00000426840 LRRIQ1Q96JM4 1722 aa11.75□□□□□ -0.53
LINC01049-201ENST00000426840 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
LINC01049-201ENST00000426840 DIP2BQ9P265 1576 aa11.75□□□□□ -0.53
LINC01049-201ENST00000426840 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
LINC01049-201ENST00000426840 CDK11AQ9UQ88 783 aaPredicted RBP11.74□□□□□ -0.53
LINC01049-201ENST00000426840 HAX1O00165 279 aa11.73□□□□□ -0.53
LINC01049-201ENST00000426840 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
LINC01049-201ENST00000426840 GLI2P10070 1586 aa11.73□□□□□ -0.53
LINC01049-201ENST00000426840 CCDC18Q5T9S5 1454 aa11.71□□□□□ -0.53
LINC01049-201ENST00000426840 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
LINC01049-201ENST00000426840 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
LINC01049-201ENST00000426840 MAGI3Q5TCQ9 1506 aa11.68□□□□□ -0.54
LINC01049-201ENST00000426840 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
LINC01049-201ENST00000426840 ABCA9Q8IUA7 1624 aa11.66□□□□□ -0.54
LINC01049-201ENST00000426840 MAP3K4Q9Y6R4 1608 aa11.66□□□□□ -0.54
LINC01049-201ENST00000426840 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
LINC01049-201ENST00000426840 TSPOAP1O95153 1857 aa11.65□□□□□ -0.54
LINC01049-201ENST00000426840 MAP3K1Q13233 1512 aa11.65□□□□□ -0.55
LINC01049-201ENST00000426840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.55
LINC01049-201ENST00000426840 PPRC1Q5VV67 1664 aaKnown RBP11.64□□□□□ -0.55
LINC01049-201ENST00000426840 CFAP43Q8NDM7 1665 aa11.64□□□□□ -0.55
LINC01049-201ENST00000426840 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
LINC01049-201ENST00000426840 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
LINC01049-201ENST00000426840 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
LINC01049-201ENST00000426840 KIF14Q15058 1648 aa11.62□□□□□ -0.55
LINC01049-201ENST00000426840 EVX2Q03828 476 aa11.61□□□□□ -0.55
LINC01049-201ENST00000426840 LRRC9Q6ZRR7 1453 aa11.61□□□□□ -0.55
LINC01049-201ENST00000426840 PLCH2O75038 1416 aa11.6□□□□□ -0.55
LINC01049-201ENST00000426840 TTC37Q6PGP7 1564 aa11.6□□□□□ -0.55
LINC01049-201ENST00000426840 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
LINC01049-201ENST00000426840 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
LINC01049-201ENST00000426840 TEX14Q8IWB6 1497 aa11.59□□□□□ -0.55
LINC01049-201ENST00000426840 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
LINC01049-201ENST00000426840 IFNLR1Q8IU57 520 aaPredicted RBP11.58□□□□□ -0.56
LINC01049-201ENST00000426840 ZBTB47Q9UFB7 747 aaPredicted RBP11.58□□□□□ -0.56
LINC01049-201ENST00000426840 EHBP1L1Q8N3D4 1523 aa11.58□□□□□ -0.56
LINC01049-201ENST00000426840 COL17A1Q9UMD9 1497 aaPredicted RBP11.57□□□□□ -0.56
LINC01049-201ENST00000426840 PHLDB1Q86UU1 1377 aa11.57□□□□□ -0.56
LINC01049-201ENST00000426840 GPATCH8Q9UKJ3 1502 aaKnown RBP11.56□□□□□ -0.56
LINC01049-201ENST00000426840 NEO1Q92859 1461 aa11.56□□□□□ -0.56
LINC01049-201ENST00000426840 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
LINC01049-201ENST00000426840 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
LINC01049-201ENST00000426840 FANCAO15360 1455 aa11.55□□□□□ -0.56
LINC01049-201ENST00000426840 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
LINC01049-201ENST00000426840 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
LINC01049-201ENST00000426840 MYO5CQ9NQX4 1742 aa11.54□□□□□ -0.56
LINC01049-201ENST00000426840 CDC42BPBQ9Y5S2 1711 aa11.54□□□□□ -0.56
LINC01049-201ENST00000426840 CDC42BPAQ5VT25 1732 aa11.53□□□□□ -0.56
LINC01049-201ENST00000426840 SUPT6HQ7KZ85 1726 aaKnown RBP11.53□□□□□ -0.56
LINC01049-201ENST00000426840 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
LINC01049-201ENST00000426840 CFDP1Q9UEE9 299 aaPredicted RBP11.53□□□□□ -0.56
LINC01049-201ENST00000426840 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
LINC01049-201ENST00000426840 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.57
LINC01049-201ENST00000426840 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
LINC01049-201ENST00000426840 ARHGAP5Q13017 1502 aa11.51□□□□□ -0.57
LINC01049-201ENST00000426840 KDM6BO15054 1643 aa11.51□□□□□ -0.57
LINC01049-201ENST00000426840 PREX2Q70Z35 1606 aa11.51□□□□□ -0.57
LINC01049-201ENST00000426840 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
LINC01049-201ENST00000426840 RAPGEF3O95398 923 aa11.51□□□□□ -0.57
LINC01049-201ENST00000426840 ZNF777Q9ULD5 760 aaPredicted RBP11.51□□□□□ -0.57
LINC01049-201ENST00000426840 ZNF644Q9H582 1327 aaPredicted RBP11.51□□□□□ -0.57
LINC01049-201ENST00000426840 SCAPERQ9BY12 1400 aa11.51□□□□□ -0.57
LINC01049-201ENST00000426840 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC01049-201ENST00000426840 NUBP1P53384 320 aa11.49□□□□□ -0.57
LINC01049-201ENST00000426840 DENND4BO75064 1496 aaPredicted RBP11.49□□□□□ -0.57
LINC01049-201ENST00000426840 ADGRL1O94910 1474 aa11.49□□□□□ -0.57
LINC01049-201ENST00000426840 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms