RNA–Protein interactions for RNA: ENST00000426797.7

EDC3-202, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-202ENST00000426797 CD109Q6YHK3 1445 aa25.6■■□□□ 1.69
EDC3-202ENST00000426797 MYO5CQ9NQX4 1742 aa25.6■■□□□ 1.69
EDC3-202ENST00000426797 DIP2BQ9P265 1576 aa25.59■■□□□ 1.69
EDC3-202ENST00000426797 PREX2Q70Z35 1606 aa25.58■■□□□ 1.69
EDC3-202ENST00000426797 PTPN23Q9H3S7 1636 aa25.58■■□□□ 1.69
EDC3-202ENST00000426797 ZEB1P37275 1124 aaPredicted RBP25.58■■□□□ 1.69
EDC3-202ENST00000426797 GLI2P10070 1586 aa25.57■■□□□ 1.68
EDC3-202ENST00000426797 EFCAB2Q5VUJ9 269 aa25.57■■□□□ 1.68
EDC3-202ENST00000426797 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
EDC3-202ENST00000426797 ITGAEP38570 1179 aa25.55■■□□□ 1.68
EDC3-202ENST00000426797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.54■■□□□ 1.682e-11■□□□□ 9.6
EDC3-202ENST00000426797 TCOF1Q13428 1488 aaKnown RBP25.54■■□□□ 1.68
EDC3-202ENST00000426797 KIF13AQ9H1H9 1805 aa25.51■■□□□ 1.67
EDC3-202ENST00000426797 CAMSAP2Q08AD1 1489 aa25.51■■□□□ 1.67
EDC3-202ENST00000426797 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
EDC3-202ENST00000426797 MAP3K4Q9Y6R4 1608 aa25.5■■□□□ 1.67
EDC3-202ENST00000426797 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
EDC3-202ENST00000426797 FANCAO15360 1455 aa25.49■■□□□ 1.67
EDC3-202ENST00000426797 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
EDC3-202ENST00000426797 SAMD9LQ8IVG5 1584 aa25.47■■□□□ 1.67
EDC3-202ENST00000426797 TSPOAP1O95153 1857 aa25.44■■□□□ 1.66
EDC3-202ENST00000426797 AKNAQ7Z591 1439 aa25.42■■□□□ 1.66
EDC3-202ENST00000426797 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
EDC3-202ENST00000426797 MBD5Q9P267 1494 aa25.41■■□□□ 1.66
EDC3-202ENST00000426797 ARHGEF12Q9NZN5 1544 aa25.4■■□□□ 1.66
EDC3-202ENST00000426797 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
EDC3-202ENST00000426797 ABCC5O15440 1437 aa25.39■■□□□ 1.66
EDC3-202ENST00000426797 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.65
EDC3-202ENST00000426797 RSPH4AQ5TD94 716 aa25.38■■□□□ 1.65
EDC3-202ENST00000426797 PLEKHH2Q8IVE3 1493 aa25.38■■□□□ 1.65
EDC3-202ENST00000426797 SYCP2Q9BX26 1530 aa25.38■■□□□ 1.65
EDC3-202ENST00000426797 DAPK1P53355 1430 aa25.38■■□□□ 1.65
EDC3-202ENST00000426797 SCAPERQ9BY12 1400 aa25.37■■□□□ 1.65
EDC3-202ENST00000426797 PPRC1Q5VV67 1664 aaKnown RBP25.36■■□□□ 1.65
EDC3-202ENST00000426797 ADGRL1O94910 1474 aa25.36■■□□□ 1.65
EDC3-202ENST00000426797 NEO1Q92859 1461 aa25.36■■□□□ 1.65
EDC3-202ENST00000426797 ABCC1P33527 1531 aa25.35■■□□□ 1.65
EDC3-202ENST00000426797 DNMT1P26358 1616 aaKnown RBP25.35■■□□□ 1.65
EDC3-202ENST00000426797 AFAP1Q8N556 730 aa25.35■■□□□ 1.65
EDC3-202ENST00000426797 TSPY4P0CV99 314 aa25.34■■□□□ 1.65
EDC3-202ENST00000426797 TSPY10P0CW01 314 aa25.34■■□□□ 1.65
EDC3-202ENST00000426797 TRAPPC8Q9Y2L5 1435 aa25.33■■□□□ 1.65
EDC3-202ENST00000426797 CFAP74Q9C0B2 1584 aa25.32■■□□□ 1.64
EDC3-202ENST00000426797 TEX14Q8IWB6 1497 aa25.32■■□□□ 1.64
EDC3-202ENST00000426797 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
EDC3-202ENST00000426797 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
EDC3-202ENST00000426797 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
EDC3-202ENST00000426797 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
EDC3-202ENST00000426797 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
EDC3-202ENST00000426797 C9orf84Q5VXU9 1444 aa25.24■■□□□ 1.63
EDC3-202ENST00000426797 DENND4BO75064 1496 aaPredicted RBP25.23■■□□□ 1.63
EDC3-202ENST00000426797 CROCC2H7BZ55 1655 aa25.23■■□□□ 1.63
EDC3-202ENST00000426797 SPAG9O60271 1321 aaKnown RBP25.22■■□□□ 1.63
EDC3-202ENST00000426797 NCOA1Q15788 1441 aa25.21■■□□□ 1.63
EDC3-202ENST00000426797 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
EDC3-202ENST00000426797 ZNF518AQ6AHZ1 1483 aa25.2■■□□□ 1.63
EDC3-202ENST00000426797 POGZQ7Z3K3 1410 aa25.2■■□□□ 1.62
EDC3-202ENST00000426797 ROCK1Q13464 1354 aa25.2■■□□□ 1.62
EDC3-202ENST00000426797 COL17A1Q9UMD9 1497 aaPredicted RBP25.19■■□□□ 1.62
EDC3-202ENST00000426797 MYT1LQ9UL68 1186 aa25.19■■□□□ 1.62
EDC3-202ENST00000426797 ANKRD30AQ9BXX3 1397 aa25.18■■□□□ 1.62
EDC3-202ENST00000426797 ADGRL2O95490 1459 aa25.17■■□□□ 1.62
EDC3-202ENST00000426797 HFM1A2PYH4 1435 aa25.16■■□□□ 1.62
EDC3-202ENST00000426797 NAIPQ13075 1403 aa25.16■■□□□ 1.62
EDC3-202ENST00000426797 SETD5Q9C0A6 1442 aa25.16■■□□□ 1.62
EDC3-202ENST00000426797 MAST1Q9Y2H9 1570 aa25.15■■□□□ 1.62
EDC3-202ENST00000426797 RTEL1-TNFRSF6BF6WH68 1400 aa25.14■■□□□ 1.62
EDC3-202ENST00000426797 RICTORQ6R327 1708 aa25.13■■□□□ 1.61
EDC3-202ENST00000426797 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
EDC3-202ENST00000426797 KDM5CP41229 1560 aa25.12■■□□□ 1.61
EDC3-202ENST00000426797 RAB3GAP2Q9H2M9 1393 aa25.11■■□□□ 1.61
EDC3-202ENST00000426797 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
EDC3-202ENST00000426797 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
EDC3-202ENST00000426797 ATP7AQ04656 1500 aa25.09■■□□□ 1.61
EDC3-202ENST00000426797 ZFYVE16Q7Z3T8 1539 aa25.09■■□□□ 1.61
EDC3-202ENST00000426797 FRMPD1Q5SYB0 1578 aa25.08■■□□□ 1.61
EDC3-202ENST00000426797 KIDINS220Q9ULH0 1771 aa25.08■■□□□ 1.61
EDC3-202ENST00000426797 INO80Q9ULG1 1556 aaPredicted RBP25.07■■□□□ 1.6
EDC3-202ENST00000426797 PLXNC1O60486 1568 aa25.04■■□□□ 1.6
EDC3-202ENST00000426797 HECW2Q9P2P5 1572 aa25.04■■□□□ 1.6
EDC3-202ENST00000426797 GCC2Q8IWJ2 1684 aa25.04■■□□□ 1.6
EDC3-202ENST00000426797 ANKRD50Q9ULJ7 1429 aa25.04■■□□□ 1.6
EDC3-202ENST00000426797 KDM6BO15054 1643 aa25.03■■□□□ 1.6
EDC3-202ENST00000426797 YEATS2Q9ULM3 1422 aa25.01■■□□□ 1.59
EDC3-202ENST00000426797 ZMYM4Q5VZL5 1548 aa25■■□□□ 1.59
EDC3-202ENST00000426797 DUOX2Q9NRD8 1548 aa24.99■■□□□ 1.59
EDC3-202ENST00000426797 MAGI2Q86UL8 1455 aa24.98■■□□□ 1.59
EDC3-202ENST00000426797 DHX29Q7Z478 1369 aaKnown RBP24.98■■□□□ 1.59
EDC3-202ENST00000426797 ABCA6Q8N139 1617 aa24.95■■□□□ 1.59
EDC3-202ENST00000426797 TRIM52Q96A61 297 aa24.95■■□□□ 1.58
EDC3-202ENST00000426797 A2MP01023 1474 aa24.94■■□□□ 1.58
EDC3-202ENST00000426797 DIP2CQ9Y2E4 1556 aa24.93■■□□□ 1.58
EDC3-202ENST00000426797 ERBINQ96RT1 1412 aa24.92■■□□□ 1.58
EDC3-202ENST00000426797 KIF3BO15066 747 aa24.91■■□□□ 1.58
EDC3-202ENST00000426797 ATP10AO60312 1499 aa24.89■■□□□ 1.58
EDC3-202ENST00000426797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.87■■□□□ 1.573e-7■■□□□ 13.1
EDC3-202ENST00000426797 ACIN1Q9UKV3 1341 aaKnown RBP24.86■■□□□ 1.57
EDC3-202ENST00000426797 NUP155O75694 1391 aa24.84■■□□□ 1.57
EDC3-202ENST00000426797 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
EDC3-202ENST00000426797 MPHOSPH9Q99550 1183 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms