RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 LRRC9Q6ZRR7 1453 aa37.01■■■■□ 3.51
PDGFA-205ENST00000426681 GPATCH8Q9UKJ3 1502 aaKnown RBP37■■■■□ 3.51
PDGFA-205ENST00000426681 RAPGEF3O95398 923 aa36.99■■■■□ 3.51
PDGFA-205ENST00000426681 DENND4BO75064 1496 aaPredicted RBP36.99■■■■□ 3.51
PDGFA-205ENST00000426681 ADGRL1O94910 1474 aa36.98■■■■□ 3.51
PDGFA-205ENST00000426681 CCNB3Q8WWL7 1395 aa36.95■■■■□ 3.51
PDGFA-205ENST00000426681 FRMPD1Q5SYB0 1578 aa36.95■■■■□ 3.51
PDGFA-205ENST00000426681 SUPT6HQ7KZ85 1726 aaKnown RBP36.94■■■■□ 3.5
PDGFA-205ENST00000426681 SCAPERQ9BY12 1400 aa36.93■■■■□ 3.5
PDGFA-205ENST00000426681 RICTORQ6R327 1708 aa36.93■■■■□ 3.5
PDGFA-205ENST00000426681 APLP2Q06481 763 aa36.93■■■■□ 3.5
PDGFA-205ENST00000426681 KANK4Q5T7N3 995 aaPredicted RBP36.92■■■■□ 3.5
PDGFA-205ENST00000426681 NCOA2Q15596 1464 aa36.91■■■■□ 3.5
PDGFA-205ENST00000426681 POGZQ7Z3K3 1410 aa36.86■■■■□ 3.49
PDGFA-205ENST00000426681 CFDP1Q9UEE9 299 aaPredicted RBP36.86■■■■□ 3.49
PDGFA-205ENST00000426681 ITSN2Q9NZM3 1697 aa36.83■■■■□ 3.49
PDGFA-205ENST00000426681 ABCC1P33527 1531 aa36.82■■■■□ 3.48
PDGFA-205ENST00000426681 ZMYM4Q5VZL5 1548 aa36.82■■■■□ 3.48
PDGFA-205ENST00000426681 SAMD9LQ8IVG5 1584 aa36.79■■■■□ 3.48
PDGFA-205ENST00000426681 ZNF777Q9ULD5 760 aaPredicted RBP36.78■■■■□ 3.48
PDGFA-205ENST00000426681 ZNF518AQ6AHZ1 1483 aa36.77■■■■□ 3.48
PDGFA-205ENST00000426681 ARHGEF12Q9NZN5 1544 aa36.77■■■■□ 3.48
PDGFA-205ENST00000426681 MAGI2Q86UL8 1455 aa36.75■■■■□ 3.47
PDGFA-205ENST00000426681 PLEKHH2Q8IVE3 1493 aa36.75■■■■□ 3.47
PDGFA-205ENST00000426681 KIAA1107Q9UPP5 1409 aa36.74■■■■□ 3.47
PDGFA-205ENST00000426681 KDM5CP41229 1560 aa36.72■■■■□ 3.47
PDGFA-205ENST00000426681 AFAP1Q8N556 730 aa36.72■■■■□ 3.47
PDGFA-205ENST00000426681 TRAPPC8Q9Y2L5 1435 aa36.7■■■■□ 3.47
PDGFA-205ENST00000426681 ARHGEF40Q8TER5 1519 aa36.69■■■■□ 3.46
PDGFA-205ENST00000426681 SYCP2Q9BX26 1530 aa36.67■■■■□ 3.46
PDGFA-205ENST00000426681 ZFYVE16Q7Z3T8 1539 aa36.66■■■■□ 3.46
PDGFA-205ENST00000426681 ZNF644Q9H582 1327 aaPredicted RBP36.65■■■■□ 3.46
PDGFA-205ENST00000426681 HNRNPMP52272 730 aaKnown RBP eCLIP36.64■■■■□ 3.46
PDGFA-205ENST00000426681 YEATS2Q9ULM3 1422 aa36.63■■■■□ 3.45
PDGFA-205ENST00000426681 MYOM3Q5VTT5 1437 aa36.62■■■■□ 3.45
PDGFA-205ENST00000426681 MLH3Q9UHC1 1453 aa36.62■■■■□ 3.45
PDGFA-205ENST00000426681 MIA2Q96PC5 1412 aa36.59■■■■□ 3.45
PDGFA-205ENST00000426681 HECW2Q9P2P5 1572 aa36.59■■■■□ 3.45
PDGFA-205ENST00000426681 MBD5Q9P267 1494 aa36.58■■■■□ 3.45
PDGFA-205ENST00000426681 CAMSAP2Q08AD1 1489 aa36.57■■■■□ 3.45
PDGFA-205ENST00000426681 KDM4FA0A1W2PPD8 638 aa36.54■■■■□ 3.44
PDGFA-205ENST00000426681 ATP10AO60312 1499 aa36.53■■■■□ 3.44
PDGFA-205ENST00000426681 RSPH4AQ5TD94 716 aa36.5■■■■□ 3.43
PDGFA-205ENST00000426681 KIDINS220Q9ULH0 1771 aa36.49■■■■□ 3.43
PDGFA-205ENST00000426681 MYT1LQ9UL68 1186 aa36.49■■■■□ 3.43
PDGFA-205ENST00000426681 SPAG9O60271 1321 aaKnown RBP36.49■■■■□ 3.43
PDGFA-205ENST00000426681 DIP2CQ9Y2E4 1556 aa36.47■■■■□ 3.43
PDGFA-205ENST00000426681 C9orf84Q5VXU9 1444 aa36.46■■■■□ 3.43
PDGFA-205ENST00000426681 ARHGEF5Q12774 1597 aa36.45■■■■□ 3.43
PDGFA-205ENST00000426681 ABCA6Q8N139 1617 aa36.45■■■■□ 3.42
PDGFA-205ENST00000426681 CCDC141Q6ZP82 1450 aa36.43■■■■□ 3.42
PDGFA-205ENST00000426681 INO80Q9ULG1 1556 aaPredicted RBP36.43■■■■□ 3.42
PDGFA-205ENST00000426681 FGD6Q6ZV73 1430 aa36.42■■■■□ 3.42
PDGFA-205ENST00000426681 ARID4BQ4LE39 1312 aaPredicted RBP36.42■■■■□ 3.42
PDGFA-205ENST00000426681 ATP7AQ04656 1500 aa36.42■■■■□ 3.42
PDGFA-205ENST00000426681 REREQ9P2R6 1566 aa36.41■■■■□ 3.42
PDGFA-205ENST00000426681 SIGLEC1Q9BZZ2 1709 aa36.41■■■■□ 3.42
PDGFA-205ENST00000426681 RTEL1-TNFRSF6BF6WH68 1400 aa36.39■■■■□ 3.42
PDGFA-205ENST00000426681 PTPN23Q9H3S7 1636 aa36.38■■■■□ 3.41
PDGFA-205ENST00000426681 BCORL1Q5H9F3 1711 aa36.37■■■■□ 3.41
PDGFA-205ENST00000426681 TCOF1Q13428 1488 aaKnown RBP36.36■■■■□ 3.41
PDGFA-205ENST00000426681 AEBP2Q6ZN18 517 aaPredicted RBP36.34■■■■□ 3.41
PDGFA-205ENST00000426681 ADAMTSL3P82987 1691 aa36.33■■■■□ 3.41
PDGFA-205ENST00000426681 TSPY4P0CV99 314 aa36.3■■■■□ 3.4
PDGFA-205ENST00000426681 TSPY10P0CW01 314 aa36.3■■■■□ 3.4
PDGFA-205ENST00000426681 AGLP35573 1532 aa36.29■■■■□ 3.4
PDGFA-205ENST00000426681 PPARGC1BQ86YN6 1023 aaKnown RBP36.28■■■■□ 3.4
PDGFA-205ENST00000426681 MAST1Q9Y2H9 1570 aa36.25■■■■□ 3.39
PDGFA-205ENST00000426681 ADGBQ8N7X0 1667 aa36.25■■■■□ 3.39
PDGFA-205ENST00000426681 A2MP01023 1474 aa36.24■■■■□ 3.39
PDGFA-205ENST00000426681 ABCC5O15440 1437 aa36.21■■■■□ 3.39
PDGFA-205ENST00000426681 PLXNC1O60486 1568 aa36.21■■■■□ 3.39
PDGFA-205ENST00000426681 DNMT1P26358 1616 aaKnown RBP36.19■■■■□ 3.38
PDGFA-205ENST00000426681 MADDQ8WXG6 1647 aa36.19■■■■□ 3.38
PDGFA-205ENST00000426681 DAPK1P53355 1430 aa36.17■■■■□ 3.38
PDGFA-205ENST00000426681 MLECQ14165 292 aa36.17■■■■□ 3.38
PDGFA-205ENST00000426681 SHANK2Q9UPX8 1470 aa36.17■■■■□ 3.38
PDGFA-205ENST00000426681 CROCC2H7BZ55 1655 aa36.16■■■■□ 3.38
PDGFA-205ENST00000426681 DHX29Q7Z478 1369 aaKnown RBP36.15■■■■□ 3.38
PDGFA-205ENST00000426681 FAM50AQ14320 339 aaKnown RBP36.14■■■■□ 3.38
PDGFA-205ENST00000426681 PTPRMP28827 1452 aa36.11■■■■□ 3.37
PDGFA-205ENST00000426681 FER1L4A9Z1Z3 1794 aa36.09■■■■□ 3.37
PDGFA-205ENST00000426681 RIMS1Q86UR5 1692 aaKnown RBP36.07■■■■□ 3.37
PDGFA-205ENST00000426681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.05■■■■□ 3.362e-6■■■■□ 19.8
PDGFA-205ENST00000426681 RRBP1Q9P2E9 1410 aaKnown RBP35.99■■■■□ 3.35
PDGFA-205ENST00000426681 DUOX2Q9NRD8 1548 aa35.98■■■■□ 3.35
PDGFA-205ENST00000426681 ANKRD30AQ9BXX3 1397 aa35.97■■■■□ 3.35
PDGFA-205ENST00000426681 KIF3BO15066 747 aa35.96■■■■□ 3.35
PDGFA-205ENST00000426681 PPP6R1Q9UPN7 881 aa35.96■■■■□ 3.35
PDGFA-205ENST00000426681 KIF15Q9NS87 1388 aa35.96■■■■□ 3.35
PDGFA-205ENST00000426681 ADGRL2O95490 1459 aa35.95■■■■□ 3.35
PDGFA-205ENST00000426681 NCOA1Q15788 1441 aa35.95■■■■□ 3.35
PDGFA-205ENST00000426681 CHIC2Q9UKJ5 165 aa35.95■■■■□ 3.35
PDGFA-205ENST00000426681 CNTLNQ9NXG0 1405 aa35.94■■■■□ 3.34
PDGFA-205ENST00000426681 GGT6Q6P531 493 aa35.94■■■■□ 3.34
PDGFA-205ENST00000426681 RRP7BPQ9NSQ0 103 aa35.94■■■■□ 3.34
PDGFA-205ENST00000426681 ESF1Q9H501 851 aaKnown RBP35.93■■■■□ 3.34
PDGFA-205ENST00000426681 EIF2AK4Q9P2K8 1649 aaKnown RBP35.92■■■■□ 3.34
PDGFA-205ENST00000426681 PTPRKQ15262 1439 aa35.91■■■■□ 3.34
PDGFA-205ENST00000426681 ERBINQ96RT1 1412 aa35.88■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms