RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 ARID4BQ4LE39 1312 aaPredicted RBP21.74■■□□□ 1.07
CCDC12-202ENST00000425441 UBTFP17480 764 aaKnown RBP21.73■■□□□ 1.07
CCDC12-202ENST00000425441 FMN1Q68DA7 1419 aa21.72■■□□□ 1.07
CCDC12-202ENST00000425441 CDK13Q14004 1512 aaKnown RBP21.72■■□□□ 1.07
CCDC12-202ENST00000425441 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
CCDC12-202ENST00000425441 ZMYM4Q5VZL5 1548 aa21.7■■□□□ 1.07
CCDC12-202ENST00000425441 MADDQ8WXG6 1647 aa21.69■■□□□ 1.06
CCDC12-202ENST00000425441 ZFYVE16Q7Z3T8 1539 aa21.66■■□□□ 1.06
CCDC12-202ENST00000425441 MAGI2Q86UL8 1455 aa21.66■■□□□ 1.06
CCDC12-202ENST00000425441 POGZQ7Z3K3 1410 aa21.66■■□□□ 1.06
CCDC12-202ENST00000425441 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-202ENST00000425441 CDK11AQ9UQ88 783 aaPredicted RBP21.66■■□□□ 1.06
CCDC12-202ENST00000425441 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
CCDC12-202ENST00000425441 PLCH2O75038 1416 aa21.65■■□□□ 1.06
CCDC12-202ENST00000425441 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
CCDC12-202ENST00000425441 MYO5CQ9NQX4 1742 aa21.63■■□□□ 1.05
CCDC12-202ENST00000425441 EHMT2Q96KQ7 1210 aa21.63■■□□□ 1.05
CCDC12-202ENST00000425441 RIMS1Q86UR5 1692 aaKnown RBP21.63■■□□□ 1.05
CCDC12-202ENST00000425441 SCAPERQ9BY12 1400 aa21.61■■□□□ 1.05
CCDC12-202ENST00000425441 KIF14Q15058 1648 aa21.6■■□□□ 1.05
CCDC12-202ENST00000425441 PCF11O94913 1555 aaKnown RBP21.59■■□□□ 1.05
CCDC12-202ENST00000425441 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
CCDC12-202ENST00000425441 RNF39Q9H2S5 420 aa21.59■■□□□ 1.05
CCDC12-202ENST00000425441 YEATS2Q9ULM3 1422 aa21.58■■□□□ 1.05
CCDC12-202ENST00000425441 CLIP1P30622 1438 aa21.57■■□□□ 1.04
CCDC12-202ENST00000425441 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
CCDC12-202ENST00000425441 LMTK3Q96Q04 1460 aa21.54■■□□□ 1.04
CCDC12-202ENST00000425441 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.04
CCDC12-202ENST00000425441 FER1L4A9Z1Z3 1794 aa21.52■■□□□ 1.04
CCDC12-202ENST00000425441 ATP10AO60312 1499 aa21.52■■□□□ 1.03
CCDC12-202ENST00000425441 ARHGAP5Q13017 1502 aa21.51■■□□□ 1.03
CCDC12-202ENST00000425441 C9orf84Q5VXU9 1444 aa21.51■■□□□ 1.03
CCDC12-202ENST00000425441 ZNF518AQ6AHZ1 1483 aa21.51■■□□□ 1.03
CCDC12-202ENST00000425441 LRRIQ1Q96JM4 1722 aa21.5■■□□□ 1.03
CCDC12-202ENST00000425441 CCDC18Q5T9S5 1454 aa21.49■■□□□ 1.03
CCDC12-202ENST00000425441 MLECQ14165 292 aa21.47■■□□□ 1.03
CCDC12-202ENST00000425441 KDM5CP41229 1560 aa21.46■■□□□ 1.03
CCDC12-202ENST00000425441 FBXO41Q8TF61 875 aa21.46■■□□□ 1.03
CCDC12-202ENST00000425441 CASKIN1Q8WXD9 1431 aa21.46■■□□□ 1.03
CCDC12-202ENST00000425441 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
CCDC12-202ENST00000425441 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
CCDC12-202ENST00000425441 CDC42BPBQ9Y5S2 1711 aa21.43■■□□□ 1.02
CCDC12-202ENST00000425441 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
CCDC12-202ENST00000425441 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
CCDC12-202ENST00000425441 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
CCDC12-202ENST00000425441 HSPA2P54652 639 aa21.38■■□□□ 1.01
CCDC12-202ENST00000425441 DIP2CQ9Y2E4 1556 aa21.38■■□□□ 1.01
CCDC12-202ENST00000425441 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
CCDC12-202ENST00000425441 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
CCDC12-202ENST00000425441 ABCC1P33527 1531 aa21.37■■□□□ 1.01
CCDC12-202ENST00000425441 PREX1Q8TCU6 1659 aa21.37■■□□□ 1.01
CCDC12-202ENST00000425441 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
CCDC12-202ENST00000425441 ABCA6Q8N139 1617 aa21.34■■□□□ 1.01
CCDC12-202ENST00000425441 CDC42BPAQ5VT25 1732 aa21.34■■□□□ 1.01
CCDC12-202ENST00000425441 AGLP35573 1532 aa21.31■■□□□ 1
CCDC12-202ENST00000425441 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
CCDC12-202ENST00000425441 C1QBPQ07021 282 aaKnown RBP21.29■■□□□ 1
CCDC12-202ENST00000425441 CEBPAP49715 358 aaPredicted RBP21.27■■□□□ 1
CCDC12-202ENST00000425441 ESF1Q9H501 851 aaKnown RBP21.27■■□□□ 1
CCDC12-202ENST00000425441 KIDINS220Q9ULH0 1771 aa21.27■■□□□ 1
CCDC12-202ENST00000425441 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
CCDC12-202ENST00000425441 SETD1BQ9UPS6 1966 aaKnown RBP21.25■□□□□ 0.99
CCDC12-202ENST00000425441 C3P01024 1663 aa21.24■□□□□ 0.99
CCDC12-202ENST00000425441 SAMD9LQ8IVG5 1584 aa21.23■□□□□ 0.99
CCDC12-202ENST00000425441 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
CCDC12-202ENST00000425441 GPATCH8Q9UKJ3 1502 aaKnown RBP21.22■□□□□ 0.99
CCDC12-202ENST00000425441 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
CCDC12-202ENST00000425441 PLEKHH2Q8IVE3 1493 aa21.21■□□□□ 0.99
CCDC12-202ENST00000425441 SYCP2Q9BX26 1530 aa21.21■□□□□ 0.99
CCDC12-202ENST00000425441 CERKQ8TCT0 537 aa21.2■□□□□ 0.98
CCDC12-202ENST00000425441 NCBP3Q53F19 620 aaKnown RBP21.19■□□□□ 0.98
CCDC12-202ENST00000425441 SPAG9O60271 1321 aaKnown RBP21.18■□□□□ 0.98
CCDC12-202ENST00000425441 CCNB3Q8WWL7 1395 aa21.18■□□□□ 0.98
CCDC12-202ENST00000425441 KIAA1107Q9UPP5 1409 aa21.18■□□□□ 0.98
CCDC12-202ENST00000425441 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
CCDC12-202ENST00000425441 STRCQ7RTU9 1775 aa21.16■□□□□ 0.98
CCDC12-202ENST00000425441 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
CCDC12-202ENST00000425441 CFDP1Q9UEE9 299 aaPredicted RBP21.16■□□□□ 0.98
CCDC12-202ENST00000425441 ATP7AQ04656 1500 aa21.15■□□□□ 0.98
CCDC12-202ENST00000425441 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.973e-6■■□□□ 12.2
CCDC12-202ENST00000425441 INO80Q9ULG1 1556 aaPredicted RBP21.13■□□□□ 0.97
CCDC12-202ENST00000425441 SUPT6HQ7KZ85 1726 aaKnown RBP21.12■□□□□ 0.97
CCDC12-202ENST00000425441 EHBP1L1Q8N3D4 1523 aa21.12■□□□□ 0.97
CCDC12-202ENST00000425441 PTPRTO14522 1441 aa21.11■□□□□ 0.97
CCDC12-202ENST00000425441 NPATQ14207 1427 aa21.1■□□□□ 0.97
CCDC12-202ENST00000425441 A2MP01023 1474 aa21.09■□□□□ 0.97
CCDC12-202ENST00000425441 PLXNC1O60486 1568 aa21.09■□□□□ 0.97
CCDC12-202ENST00000425441 TIAM1Q13009 1591 aa21.08■□□□□ 0.97
CCDC12-202ENST00000425441 ADGBQ8N7X0 1667 aa21.07■□□□□ 0.96
CCDC12-202ENST00000425441 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
CCDC12-202ENST00000425441 CLTCQ00610 1675 aaKnown RBP21.05■□□□□ 0.96
CCDC12-202ENST00000425441 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
CCDC12-202ENST00000425441 NCOA1Q15788 1441 aa21.03■□□□□ 0.96
CCDC12-202ENST00000425441 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
CCDC12-202ENST00000425441 GGT6Q6P531 493 aa21■□□□□ 0.95
CCDC12-202ENST00000425441 MBD5Q9P267 1494 aa21■□□□□ 0.95
CCDC12-202ENST00000425441 CAMSAP1Q5T5Y3 1602 aa21■□□□□ 0.95
CCDC12-202ENST00000425441 ZNF142P52746 1687 aaPredicted RBP20.99■□□□□ 0.95
CCDC12-202ENST00000425441 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
CCDC12-202ENST00000425441 ZNF644Q9H582 1327 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms