RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 RIMS1Q86UR5 1692 aaKnown RBP24.86■■□□□ 1.57
ATG4B-209ENST00000425239 PCF11O94913 1555 aaKnown RBP24.86■■□□□ 1.57
ATG4B-209ENST00000425239 LRRIQ1Q96JM4 1722 aa24.83■■□□□ 1.57
ATG4B-209ENST00000425239 KIF14Q15058 1648 aa24.83■■□□□ 1.57
ATG4B-209ENST00000425239 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
ATG4B-209ENST00000425239 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
ATG4B-209ENST00000425239 CDK11AQ9UQ88 783 aaPredicted RBP24.8■■□□□ 1.56
ATG4B-209ENST00000425239 MYO5CQ9NQX4 1742 aa24.8■■□□□ 1.56
ATG4B-209ENST00000425239 TROQ12816 1431 aaPredicted RBP24.79■■□□□ 1.56
ATG4B-209ENST00000425239 ATP10AO60312 1499 aa24.77■■□□□ 1.56
ATG4B-209ENST00000425239 FBXO41Q8TF61 875 aa24.76■■□□□ 1.55
ATG4B-209ENST00000425239 MLECQ14165 292 aa24.74■■□□□ 1.55
ATG4B-209ENST00000425239 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
ATG4B-209ENST00000425239 HSPA2P54652 639 aa24.73■■□□□ 1.55
ATG4B-209ENST00000425239 AFAP1Q8N556 730 aa24.73■■□□□ 1.55
ATG4B-209ENST00000425239 KDM5CP41229 1560 aa24.72■■□□□ 1.55
ATG4B-209ENST00000425239 C9orf84Q5VXU9 1444 aa24.71■■□□□ 1.55
ATG4B-209ENST00000425239 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
ATG4B-209ENST00000425239 FER1L4A9Z1Z3 1794 aa24.7■■□□□ 1.55
ATG4B-209ENST00000425239 ZNF518AQ6AHZ1 1483 aa24.7■■□□□ 1.54
ATG4B-209ENST00000425239 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
ATG4B-209ENST00000425239 ARHGAP5Q13017 1502 aa24.68■■□□□ 1.54
ATG4B-209ENST00000425239 PLPPR3Q6T4P5 718 aa24.67■■□□□ 1.54
ATG4B-209ENST00000425239 CLIP1P30622 1438 aa24.67■■□□□ 1.54
ATG4B-209ENST00000425239 MLH3Q9UHC1 1453 aa24.63■■□□□ 1.53
ATG4B-209ENST00000425239 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
ATG4B-209ENST00000425239 DIP2CQ9Y2E4 1556 aa24.62■■□□□ 1.53
ATG4B-209ENST00000425239 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
ATG4B-209ENST00000425239 CCDC18Q5T9S5 1454 aa24.61■■□□□ 1.53
ATG4B-209ENST00000425239 REREQ9P2R6 1566 aa24.61■■□□□ 1.53
ATG4B-209ENST00000425239 PREX2Q70Z35 1606 aa24.61■■□□□ 1.53
ATG4B-209ENST00000425239 ABCC1P33527 1531 aa24.58■■□□□ 1.53
ATG4B-209ENST00000425239 ABCA6Q8N139 1617 aa24.57■■□□□ 1.52
ATG4B-209ENST00000425239 CDC42BPAQ5VT25 1732 aa24.55■■□□□ 1.52
ATG4B-209ENST00000425239 PREX1Q8TCU6 1659 aa24.54■■□□□ 1.52
ATG4B-209ENST00000425239 ITSN2Q9NZM3 1697 aa24.53■■□□□ 1.52
ATG4B-209ENST00000425239 FYCO1Q9BQS8 1478 aa24.53■■□□□ 1.52
ATG4B-209ENST00000425239 AGLP35573 1532 aa24.53■■□□□ 1.52
ATG4B-209ENST00000425239 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
ATG4B-209ENST00000425239 SETD1BQ9UPS6 1966 aaKnown RBP24.51■■□□□ 1.51
ATG4B-209ENST00000425239 GPATCH8Q9UKJ3 1502 aaKnown RBP24.49■■□□□ 1.51
ATG4B-209ENST00000425239 STRCQ7RTU9 1775 aa24.49■■□□□ 1.51
ATG4B-209ENST00000425239 CERKQ8TCT0 537 aa24.47■■□□□ 1.51
ATG4B-209ENST00000425239 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
ATG4B-209ENST00000425239 C3P01024 1663 aa24.46■■□□□ 1.51
ATG4B-209ENST00000425239 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
ATG4B-209ENST00000425239 UHRF1BP1Q6BDS2 1440 aa24.42■■□□□ 1.5
ATG4B-209ENST00000425239 HNRNPMP52272 730 aaKnown RBP eCLIP24.41■■□□□ 1.54e-7■■■■□ 21.8
ATG4B-209ENST00000425239 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
ATG4B-209ENST00000425239 KIAA1107Q9UPP5 1409 aa24.39■■□□□ 1.5
ATG4B-209ENST00000425239 SYCP2Q9BX26 1530 aa24.39■■□□□ 1.49
ATG4B-209ENST00000425239 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
ATG4B-209ENST00000425239 CNTLNQ9NXG0 1405 aa24.35■■□□□ 1.49
ATG4B-209ENST00000425239 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
ATG4B-209ENST00000425239 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-209ENST00000425239 PTPRTO14522 1441 aa24.31■■□□□ 1.48
ATG4B-209ENST00000425239 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
ATG4B-209ENST00000425239 ESF1Q9H501 851 aaKnown RBP24.31■■□□□ 1.48
ATG4B-209ENST00000425239 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
ATG4B-209ENST00000425239 ATP7AQ04656 1500 aa24.3■■□□□ 1.48
ATG4B-209ENST00000425239 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
ATG4B-209ENST00000425239 PLEKHH2Q8IVE3 1493 aa24.3■■□□□ 1.48
ATG4B-209ENST00000425239 CCNB3Q8WWL7 1395 aa24.29■■□□□ 1.48
ATG4B-209ENST00000425239 MROH2AA6NES4 1674 aa24.29■■□□□ 1.48
ATG4B-209ENST00000425239 SUPT6HQ7KZ85 1726 aaKnown RBP24.29■■□□□ 1.48
ATG4B-209ENST00000425239 ZNF644Q9H582 1327 aaPredicted RBP24.29■■□□□ 1.48
ATG4B-209ENST00000425239 NPATQ14207 1427 aa24.27■■□□□ 1.48
ATG4B-209ENST00000425239 MBD5Q9P267 1494 aa24.27■■□□□ 1.48
ATG4B-209ENST00000425239 MTUS2Q5JR59 1369 aa24.27■■□□□ 1.48
ATG4B-209ENST00000425239 A2MP01023 1474 aa24.26■■□□□ 1.47
ATG4B-209ENST00000425239 NCOA1Q15788 1441 aa24.25■■□□□ 1.47
ATG4B-209ENST00000425239 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
ATG4B-209ENST00000425239 LTBP4Q8N2S1 1624 aa24.23■■□□□ 1.47
ATG4B-209ENST00000425239 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
ATG4B-209ENST00000425239 CLTCQ00610 1675 aaKnown RBP24.2■■□□□ 1.46
ATG4B-209ENST00000425239 EHBP1L1Q8N3D4 1523 aa24.19■■□□□ 1.46
ATG4B-209ENST00000425239 PTPRKQ15262 1439 aa24.18■■□□□ 1.46
ATG4B-209ENST00000425239 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
ATG4B-209ENST00000425239 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
ATG4B-209ENST00000425239 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
ATG4B-209ENST00000425239 GGT6Q6P531 493 aa24.17■■□□□ 1.46
ATG4B-209ENST00000425239 ADGBQ8N7X0 1667 aa24.17■■□□□ 1.46
ATG4B-209ENST00000425239 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
ATG4B-209ENST00000425239 NCKAP5LQ9HCH0 1330 aa24.12■■□□□ 1.45
ATG4B-209ENST00000425239 ZNF142P52746 1687 aaPredicted RBP24.11■■□□□ 1.45
ATG4B-209ENST00000425239 MYO3AQ8NEV4 1616 aa24.1■■□□□ 1.45
ATG4B-209ENST00000425239 NCOA2Q15596 1464 aa24.1■■□□□ 1.45
ATG4B-209ENST00000425239 TCOF1Q13428 1488 aaKnown RBP24.09■■□□□ 1.45
ATG4B-209ENST00000425239 PLA2R1Q13018 1463 aa24.08■■□□□ 1.45
ATG4B-209ENST00000425239 IQSEC2Q5JU85 1478 aa24.08■■□□□ 1.45
ATG4B-209ENST00000425239 CEP170BQ9Y4F5 1589 aaPredicted RBP24.08■■□□□ 1.44
ATG4B-209ENST00000425239 PKD2Q13563 968 aa24.05■■□□□ 1.44
ATG4B-209ENST00000425239 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
ATG4B-209ENST00000425239 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
ATG4B-209ENST00000425239 CCDC141Q6ZP82 1450 aa24.04■■□□□ 1.44
ATG4B-209ENST00000425239 ZNF335Q9H4Z2 1342 aaPredicted RBP24.03■■□□□ 1.44
ATG4B-209ENST00000425239 FBXO31Q5XUX0 539 aaPredicted RBP24.02■■□□□ 1.44
ATG4B-209ENST00000425239 KIF3BO15066 747 aa24.01■■□□□ 1.43
ATG4B-209ENST00000425239 DNMT1P26358 1616 aaKnown RBP24.01■■□□□ 1.43
ATG4B-209ENST00000425239 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms