RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MYO5CQ9NQX4 1742 aa22.46■■□□□ 1.19
CALD1-206ENST00000424922 PREX2Q70Z35 1606 aa22.46■■□□□ 1.19
CALD1-206ENST00000424922 ZNF644Q9H582 1327 aaPredicted RBP22.45■■□□□ 1.18
CALD1-206ENST00000424922 ZNF777Q9ULD5 760 aaPredicted RBP22.43■■□□□ 1.18
CALD1-206ENST00000424922 CAMSAP2Q08AD1 1489 aa22.43■■□□□ 1.18
CALD1-206ENST00000424922 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
CALD1-206ENST00000424922 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
CALD1-206ENST00000424922 ARHGAP5Q13017 1502 aa22.37■■□□□ 1.17
CALD1-206ENST00000424922 ABCA9Q8IUA7 1624 aa22.36■■□□□ 1.17
CALD1-206ENST00000424922 DAPK1P53355 1430 aa22.34■■□□□ 1.17
CALD1-206ENST00000424922 SAMD9LQ8IVG5 1584 aa22.34■■□□□ 1.17
CALD1-206ENST00000424922 CCER1Q8TC90 406 aaPredicted RBP22.34■■□□□ 1.17
CALD1-206ENST00000424922 PLCH2O75038 1416 aa22.33■■□□□ 1.17
CALD1-206ENST00000424922 MAPKBP1O60336 1514 aa22.33■■□□□ 1.16
CALD1-206ENST00000424922 ABCC5O15440 1437 aa22.32■■□□□ 1.16
CALD1-206ENST00000424922 CHIC2Q9UKJ5 165 aa22.32■■□□□ 1.16
CALD1-206ENST00000424922 CROCC2H7BZ55 1655 aa22.31■■□□□ 1.16
CALD1-206ENST00000424922 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
CALD1-206ENST00000424922 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
CALD1-206ENST00000424922 ARAP3Q8WWN8 1544 aa22.27■■□□□ 1.16
CALD1-206ENST00000424922 HNRNPMP52272 730 aaKnown RBP eCLIP22.27■■□□□ 1.15
CALD1-206ENST00000424922 EFCAB2Q5VUJ9 269 aa22.26■■□□□ 1.15
CALD1-206ENST00000424922 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
CALD1-206ENST00000424922 ARHGEF5Q12774 1597 aa22.25■■□□□ 1.15
CALD1-206ENST00000424922 SYCP2Q9BX26 1530 aa22.25■■□□□ 1.15
CALD1-206ENST00000424922 ADGBQ8N7X0 1667 aa22.24■■□□□ 1.15
CALD1-206ENST00000424922 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
CALD1-206ENST00000424922 MBD5Q9P267 1494 aa22.24■■□□□ 1.15
CALD1-206ENST00000424922 GCC2Q8IWJ2 1684 aa22.24■■□□□ 1.15
CALD1-206ENST00000424922 NAIPQ13075 1403 aa22.23■■□□□ 1.15
CALD1-206ENST00000424922 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
CALD1-206ENST00000424922 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
CALD1-206ENST00000424922 FANCAO15360 1455 aa22.21■■□□□ 1.15
CALD1-206ENST00000424922 ROCK1Q13464 1354 aa22.2■■□□□ 1.14
CALD1-206ENST00000424922 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
CALD1-206ENST00000424922 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
CALD1-206ENST00000424922 CCDC141Q6ZP82 1450 aa22.19■■□□□ 1.14
CALD1-206ENST00000424922 ABCC1P33527 1531 aa22.19■■□□□ 1.14
CALD1-206ENST00000424922 ARHGEF12Q9NZN5 1544 aa22.19■■□□□ 1.14
CALD1-206ENST00000424922 SHANK2Q9UPX8 1470 aa22.18■■□□□ 1.14
CALD1-206ENST00000424922 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
CALD1-206ENST00000424922 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
CALD1-206ENST00000424922 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
CALD1-206ENST00000424922 C9orf84Q5VXU9 1444 aa22.17■■□□□ 1.14
CALD1-206ENST00000424922 MAP3K4Q9Y6R4 1608 aa22.15■■□□□ 1.14
CALD1-206ENST00000424922 ADGRL2O95490 1459 aa22.15■■□□□ 1.14
CALD1-206ENST00000424922 GLI2P10070 1586 aa22.15■■□□□ 1.14
CALD1-206ENST00000424922 DIP2BQ9P265 1576 aa22.15■■□□□ 1.14
CALD1-206ENST00000424922 NCOA1Q15788 1441 aa22.14■■□□□ 1.14
CALD1-206ENST00000424922 KDM6BO15054 1643 aa22.14■■□□□ 1.13
CALD1-206ENST00000424922 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.13
CALD1-206ENST00000424922 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
CALD1-206ENST00000424922 CFAP74Q9C0B2 1584 aa22.12■■□□□ 1.13
CALD1-206ENST00000424922 FAM69CQ0P6D2 419 aa22.11■■□□□ 1.13
CALD1-206ENST00000424922 ADGRL1O94910 1474 aa22.11■■□□□ 1.13
CALD1-206ENST00000424922 TRAPPC8Q9Y2L5 1435 aa22.1■■□□□ 1.13
CALD1-206ENST00000424922 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
CALD1-206ENST00000424922 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
CALD1-206ENST00000424922 KIF13AQ9H1H9 1805 aa22.08■■□□□ 1.13
CALD1-206ENST00000424922 SCAPERQ9BY12 1400 aa22.07■■□□□ 1.12
CALD1-206ENST00000424922 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
CALD1-206ENST00000424922 DNAJC5Q9H3Z4 198 aa22.05■■□□□ 1.12
CALD1-206ENST00000424922 KIF15Q9NS87 1388 aa22.03■■□□□ 1.12
CALD1-206ENST00000424922 NEO1Q92859 1461 aa22.03■■□□□ 1.12
CALD1-206ENST00000424922 PLXNC1O60486 1568 aa22.02■■□□□ 1.12
CALD1-206ENST00000424922 ANKRD50Q9ULJ7 1429 aa22.01■■□□□ 1.11
CALD1-206ENST00000424922 PPRC1Q5VV67 1664 aaKnown RBP22■■□□□ 1.11
CALD1-206ENST00000424922 SPAG9O60271 1321 aaKnown RBP22■■□□□ 1.11
CALD1-206ENST00000424922 TRIM52Q96A61 297 aa22■■□□□ 1.11
CALD1-206ENST00000424922 ZFYVE16Q7Z3T8 1539 aa21.98■■□□□ 1.11
CALD1-206ENST00000424922 CLSPNQ9HAW4 1339 aa21.97■■□□□ 1.11
CALD1-206ENST00000424922 INO80Q9ULG1 1556 aaPredicted RBP21.97■■□□□ 1.11
CALD1-206ENST00000424922 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
CALD1-206ENST00000424922 RTEL1-TNFRSF6BF6WH68 1400 aa21.96■■□□□ 1.11
CALD1-206ENST00000424922 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
CALD1-206ENST00000424922 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
CALD1-206ENST00000424922 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
CALD1-206ENST00000424922 MYT1LQ9UL68 1186 aa21.94■■□□□ 1.1
CALD1-206ENST00000424922 DUOX2Q9NRD8 1548 aa21.93■■□□□ 1.1
CALD1-206ENST00000424922 KIDINS220Q9ULH0 1771 aa21.93■■□□□ 1.1
CALD1-206ENST00000424922 KDM5CP41229 1560 aa21.92■■□□□ 1.1
CALD1-206ENST00000424922 DENND4BO75064 1496 aaPredicted RBP21.92■■□□□ 1.1
CALD1-206ENST00000424922 TEX14Q8IWB6 1497 aa21.92■■□□□ 1.1
CALD1-206ENST00000424922 RICTORQ6R327 1708 aa21.92■■□□□ 1.1
CALD1-206ENST00000424922 RAPGEF3O95398 923 aa21.89■■□□□ 1.1
CALD1-206ENST00000424922 MPHOSPH9Q99550 1183 aa21.88■■□□□ 1.09
CALD1-206ENST00000424922 HECW2Q9P2P5 1572 aa21.88■■□□□ 1.09
CALD1-206ENST00000424922 ERBINQ96RT1 1412 aa21.87■■□□□ 1.09
CALD1-206ENST00000424922 PZPP20742 1482 aa21.85■■□□□ 1.09
CALD1-206ENST00000424922 MLH3Q9UHC1 1453 aa21.85■■□□□ 1.09
CALD1-206ENST00000424922 SLC4A1APQ9BWU0 796 aaKnown RBP21.84■■□□□ 1.09
CALD1-206ENST00000424922 NUP155O75694 1391 aa21.84■■□□□ 1.09
CALD1-206ENST00000424922 FRMPD1Q5SYB0 1578 aa21.83■■□□□ 1.09
CALD1-206ENST00000424922 UNC13BO14795 1591 aa21.83■■□□□ 1.08
CALD1-206ENST00000424922 KDM5DQ9BY66 1539 aa21.81■■□□□ 1.08
CALD1-206ENST00000424922 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
CALD1-206ENST00000424922 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
CALD1-206ENST00000424922 FOXD1Q16676 465 aa21.79■■□□□ 1.08
CALD1-206ENST00000424922 DHX29Q7Z478 1369 aaKnown RBP21.78■■□□□ 1.08
CALD1-206ENST00000424922 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms