RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
PBRM1-212ENST00000424867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.51□□□□□ -0.09
PBRM1-212ENST00000424867 ZFP91Q96JP5 570 aaPredicted RBP14.51□□□□□ -0.09
PBRM1-212ENST00000424867 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
PBRM1-212ENST00000424867 ARSIQ5FYB1 569 aa14.48□□□□□ -0.09
PBRM1-212ENST00000424867 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
PBRM1-212ENST00000424867 ANKRD13DQ6ZTN6 518 aa14.42□□□□□ -0.1
PBRM1-212ENST00000424867 PTGER2P43116 358 aa14.41□□□□□ -0.1
PBRM1-212ENST00000424867 KHSRPQ92945 711 aaKnown RBP eCLIP14.4□□□□□ -0.1
PBRM1-212ENST00000424867 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
PBRM1-212ENST00000424867 NLRP6P59044 892 aa14.38□□□□□ -0.11
PBRM1-212ENST00000424867 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
PBRM1-212ENST00000424867 LSM11P83369 360 aaKnown RBP eCLIP14.32□□□□□ -0.12
PBRM1-212ENST00000424867 BCL11BQ9C0K0 894 aaPredicted RBP14.31□□□□□ -0.12
PBRM1-212ENST00000424867 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
PBRM1-212ENST00000424867 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
PBRM1-212ENST00000424867 NUDT7P0C024 238 aa14.25□□□□□ -0.13
PBRM1-212ENST00000424867 C2orf72A6NCS6 295 aa14.24□□□□□ -0.13
PBRM1-212ENST00000424867 MFRPQ9BY79 579 aa14.24□□□□□ -0.13
PBRM1-212ENST00000424867 KIF3CO14782 793 aa14.23□□□□□ -0.13
PBRM1-212ENST00000424867 PBX2P40425 430 aa14.21□□□□□ -0.13
PBRM1-212ENST00000424867 LHX6Q9UPM6 363 aa14.19□□□□□ -0.14
PBRM1-212ENST00000424867 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
PBRM1-212ENST00000424867 STK25O00506 426 aa14.17□□□□□ -0.14
PBRM1-212ENST00000424867 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
PBRM1-212ENST00000424867 POTEEQ6S8J3 1075 aa14.15□□□□□ -0.14
PBRM1-212ENST00000424867 SLC34A2O95436 690 aa14.14□□□□□ -0.15
PBRM1-212ENST00000424867 TMC2Q8TDI7 906 aa14.12□□□□□ -0.15
PBRM1-212ENST00000424867 PLA2G2EQ9NZK7 142 aa14.09□□□□□ -0.15
PBRM1-212ENST00000424867 HCSTQ9UBK5 93 aa14.08□□□□□ -0.16
PBRM1-212ENST00000424867 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
PBRM1-212ENST00000424867 ARHGAP33O14559 1287 aa14.04□□□□□ -0.16
PBRM1-212ENST00000424867 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
PBRM1-212ENST00000424867 PSDA5PKW4 1024 aaPredicted RBP14.01□□□□□ -0.17
PBRM1-212ENST00000424867 PPP1R37O75864 691 aa13.97□□□□□ -0.17
PBRM1-212ENST00000424867 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
PBRM1-212ENST00000424867 RGL2O15211 777 aa13.94□□□□□ -0.18
PBRM1-212ENST00000424867 TK2O00142 265 aa13.93□□□□□ -0.18
PBRM1-212ENST00000424867 PSEN2P49810 448 aa13.93□□□□□ -0.18
PBRM1-212ENST00000424867 DMRTA1Q5VZB9 504 aa13.93□□□□□ -0.18
PBRM1-212ENST00000424867 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
PBRM1-212ENST00000424867 HRO43593 1189 aa13.9□□□□□ -0.18
PBRM1-212ENST00000424867 PKD2Q13563 968 aa13.87□□□□□ -0.19
PBRM1-212ENST00000424867 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
PBRM1-212ENST00000424867 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
PBRM1-212ENST00000424867 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
PBRM1-212ENST00000424867 KCTD12Q96CX2 325 aaKnown RBP13.86□□□□□ -0.19
PBRM1-212ENST00000424867 FOXK1P85037 733 aa13.85□□□□□ -0.19
PBRM1-212ENST00000424867 TBC1D12O60347 775 aa13.83□□□□□ -0.2
PBRM1-212ENST00000424867 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
PBRM1-212ENST00000424867 KCNK17Q96T54 332 aa13.79□□□□□ -0.2
PBRM1-212ENST00000424867 DSG2Q14126 1118 aa13.78□□□□□ -0.2
PBRM1-212ENST00000424867 KCNH8Q96L42 1107 aa13.78□□□□□ -0.2
PBRM1-212ENST00000424867 PTPN5P54829 565 aa13.72□□□□□ -0.21
PBRM1-212ENST00000424867 VPS9D1Q9Y2B5 631 aa13.72□□□□□ -0.21
PBRM1-212ENST00000424867 ZNF454Q8N9F8 522 aa13.66□□□□□ -0.22
PBRM1-212ENST00000424867 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.22
PBRM1-212ENST00000424867 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
PBRM1-212ENST00000424867 HS6ST3Q8IZP7 471 aa13.64□□□□□ -0.23
PBRM1-212ENST00000424867 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
PBRM1-212ENST00000424867 SLC4A5Q9BY07 1137 aa13.62□□□□□ -0.23
PBRM1-212ENST00000424867 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
PBRM1-212ENST00000424867 RGS20O76081 388 aa13.59□□□□□ -0.23
PBRM1-212ENST00000424867 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
PBRM1-212ENST00000424867 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
PBRM1-212ENST00000424867 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
PBRM1-212ENST00000424867 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.24
PBRM1-212ENST00000424867 PTPREP23469 700 aa13.57□□□□□ -0.24
PBRM1-212ENST00000424867 FOSBP53539 338 aa13.56□□□□□ -0.24
PBRM1-212ENST00000424867 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
PBRM1-212ENST00000424867 WNT2BQ93097 391 aa13.55□□□□□ -0.24
PBRM1-212ENST00000424867 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
PBRM1-212ENST00000424867 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
PBRM1-212ENST00000424867 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
PBRM1-212ENST00000424867 PPP1R15BQ5SWA1 713 aa13.53□□□□□ -0.24
PBRM1-212ENST00000424867 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
PBRM1-212ENST00000424867 A0A0G2JS52 829 aa13.51□□□□□ -0.25
PBRM1-212ENST00000424867 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
PBRM1-212ENST00000424867 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
PBRM1-212ENST00000424867 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
PBRM1-212ENST00000424867 EVI5O60447 810 aa13.46□□□□□ -0.25
PBRM1-212ENST00000424867 ZDHHC16Q969W1 377 aa13.46□□□□□ -0.25
PBRM1-212ENST00000424867 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
PBRM1-212ENST00000424867 NBPF3Q9H094 633 aa13.46□□□□□ -0.25
PBRM1-212ENST00000424867 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.25
PBRM1-212ENST00000424867 PDE4AP27815 886 aa13.45□□□□□ -0.26
PBRM1-212ENST00000424867 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
PBRM1-212ENST00000424867 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
PBRM1-212ENST00000424867 MAP3K9P80192 1104 aa13.37□□□□□ -0.27
PBRM1-212ENST00000424867 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
PBRM1-212ENST00000424867 ANKK1Q8NFD2 765 aa13.34□□□□□ -0.27
PBRM1-212ENST00000424867 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
PBRM1-212ENST00000424867 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
PBRM1-212ENST00000424867 PROX2Q3B8N5 592 aa13.33□□□□□ -0.28
PBRM1-212ENST00000424867 DDX27Q96GQ7 796 aaKnown RBP13.32□□□□□ -0.28
PBRM1-212ENST00000424867 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
PBRM1-212ENST00000424867 PCDHGA10Q9Y5H3 936 aa13.3□□□□□ -0.28
PBRM1-212ENST00000424867 COL9A1P20849 921 aa13.29□□□□□ -0.28
PBRM1-212ENST00000424867 BCAMP50895 628 aa13.29□□□□□ -0.28
PBRM1-212ENST00000424867 SOWAHBA6NEL2 793 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms