RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 RICTORQ6R327 1708 aa29.62■■■□□ 2.33
PRNP-202ENST00000424424 PREX2Q70Z35 1606 aa29.61■■■□□ 2.33
PRNP-202ENST00000424424 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
PRNP-202ENST00000424424 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
PRNP-202ENST00000424424 EHBP1L1Q8N3D4 1523 aa29.59■■■□□ 2.33
PRNP-202ENST00000424424 SCAPERQ9BY12 1400 aa29.58■■■□□ 2.33
PRNP-202ENST00000424424 TIAM1Q13009 1591 aa29.54■■■□□ 2.32
PRNP-202ENST00000424424 CCNB3Q8WWL7 1395 aa29.51■■■□□ 2.31
PRNP-202ENST00000424424 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
PRNP-202ENST00000424424 ZMYM4Q5VZL5 1548 aa29.49■■■□□ 2.31
PRNP-202ENST00000424424 GPATCH8Q9UKJ3 1502 aaKnown RBP29.49■■■□□ 2.31
PRNP-202ENST00000424424 SUPT6HQ7KZ85 1726 aaKnown RBP29.47■■■□□ 2.31
PRNP-202ENST00000424424 MAP3K1Q13233 1512 aa29.45■■■□□ 2.31
PRNP-202ENST00000424424 ZNF518AQ6AHZ1 1483 aa29.45■■■□□ 2.31
PRNP-202ENST00000424424 MAGI2Q86UL8 1455 aa29.45■■■□□ 2.31
PRNP-202ENST00000424424 ITSN2Q9NZM3 1697 aa29.44■■■□□ 2.3
PRNP-202ENST00000424424 CFDP1Q9UEE9 299 aaPredicted RBP29.44■■■□□ 2.3
PRNP-202ENST00000424424 ZNF777Q9ULD5 760 aaPredicted RBP29.44■■■□□ 2.3
PRNP-202ENST00000424424 APLP2Q06481 763 aa29.43■■■□□ 2.3
PRNP-202ENST00000424424 ABCC1P33527 1531 aa29.43■■■□□ 2.3
PRNP-202ENST00000424424 ARHGEF40Q8TER5 1519 aa29.43■■■□□ 2.3
PRNP-202ENST00000424424 ZFYVE16Q7Z3T8 1539 aa29.42■■■□□ 2.3
PRNP-202ENST00000424424 LRRC9Q6ZRR7 1453 aa29.41■■■□□ 2.3
PRNP-202ENST00000424424 SAMD9LQ8IVG5 1584 aa29.39■■■□□ 2.29
PRNP-202ENST00000424424 NCOA2Q15596 1464 aa29.38■■■□□ 2.29
PRNP-202ENST00000424424 AFAP1Q8N556 730 aa29.38■■■□□ 2.29
PRNP-202ENST00000424424 MYT1LQ9UL68 1186 aa29.37■■■□□ 2.29
PRNP-202ENST00000424424 KDM5CP41229 1560 aa29.36■■■□□ 2.29
PRNP-202ENST00000424424 PLEKHH2Q8IVE3 1493 aa29.36■■■□□ 2.29
PRNP-202ENST00000424424 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
PRNP-202ENST00000424424 YEATS2Q9ULM3 1422 aa29.35■■■□□ 2.29
PRNP-202ENST00000424424 ARHGEF12Q9NZN5 1544 aa29.35■■■□□ 2.29
PRNP-202ENST00000424424 HECW2Q9P2P5 1572 aa29.33■■■□□ 2.29
PRNP-202ENST00000424424 TRAPPC8Q9Y2L5 1435 aa29.32■■■□□ 2.28
PRNP-202ENST00000424424 SYCP2Q9BX26 1530 aa29.31■■■□□ 2.28
PRNP-202ENST00000424424 KANK4Q5T7N3 995 aaPredicted RBP29.31■■■□□ 2.28
PRNP-202ENST00000424424 KIAA1107Q9UPP5 1409 aa29.3■■■□□ 2.28
PRNP-202ENST00000424424 HNRNPMP52272 730 aaKnown RBP eCLIP29.29■■■□□ 2.284e-6■■■■□ 23.6
PRNP-202ENST00000424424 ATP10AO60312 1499 aa29.28■■■□□ 2.28
PRNP-202ENST00000424424 MLH3Q9UHC1 1453 aa29.28■■■□□ 2.28
PRNP-202ENST00000424424 BCORL1Q5H9F3 1711 aa29.26■■■□□ 2.27
PRNP-202ENST00000424424 C9orf84Q5VXU9 1444 aa29.25■■■□□ 2.27
PRNP-202ENST00000424424 ADAMTSL3P82987 1691 aa29.22■■■□□ 2.27
PRNP-202ENST00000424424 ZNF644Q9H582 1327 aaPredicted RBP29.21■■■□□ 2.27
PRNP-202ENST00000424424 KIDINS220Q9ULH0 1771 aa29.21■■■□□ 2.27
PRNP-202ENST00000424424 SPAG9O60271 1321 aaKnown RBP29.2■■■□□ 2.27
PRNP-202ENST00000424424 DIP2CQ9Y2E4 1556 aa29.2■■■□□ 2.26
PRNP-202ENST00000424424 ABCA6Q8N139 1617 aa29.19■■■□□ 2.26
PRNP-202ENST00000424424 SIGLEC1Q9BZZ2 1709 aa29.18■■■□□ 2.26
PRNP-202ENST00000424424 CAMSAP2Q08AD1 1489 aa29.17■■■□□ 2.26
PRNP-202ENST00000424424 REREQ9P2R6 1566 aa29.14■■■□□ 2.26
PRNP-202ENST00000424424 MYOM3Q5VTT5 1437 aa29.14■■■□□ 2.26
PRNP-202ENST00000424424 RSPH4AQ5TD94 716 aa29.14■■■□□ 2.26
PRNP-202ENST00000424424 MBD5Q9P267 1494 aa29.14■■■□□ 2.26
PRNP-202ENST00000424424 ATP7AQ04656 1500 aa29.13■■■□□ 2.25
PRNP-202ENST00000424424 MADDQ8WXG6 1647 aa29.12■■■□□ 2.25
PRNP-202ENST00000424424 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
PRNP-202ENST00000424424 INO80Q9ULG1 1556 aaPredicted RBP29.11■■■□□ 2.25
PRNP-202ENST00000424424 MLECQ14165 292 aa29.11■■■□□ 2.25
PRNP-202ENST00000424424 CCDC141Q6ZP82 1450 aa29.09■■■□□ 2.25
PRNP-202ENST00000424424 RIMS1Q86UR5 1692 aaKnown RBP29.07■■■□□ 2.24
PRNP-202ENST00000424424 ARHGEF5Q12774 1597 aa29.06■■■□□ 2.24
PRNP-202ENST00000424424 PTPRMP28827 1452 aa29.06■■■□□ 2.24
PRNP-202ENST00000424424 ILDR1Q86SU0 546 aaPredicted RBP29.06■■■□□ 2.24
PRNP-202ENST00000424424 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
PRNP-202ENST00000424424 AGLP35573 1532 aa29.04■■■□□ 2.24
PRNP-202ENST00000424424 RTEL1-TNFRSF6BF6WH68 1400 aa29.04■■■□□ 2.24
PRNP-202ENST00000424424 ADGBQ8N7X0 1667 aa29.03■■■□□ 2.24
PRNP-202ENST00000424424 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
PRNP-202ENST00000424424 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
PRNP-202ENST00000424424 A2MP01023 1474 aa28.99■■■□□ 2.23
PRNP-202ENST00000424424 PTPN23Q9H3S7 1636 aa28.98■■■□□ 2.23
PRNP-202ENST00000424424 FGD6Q6ZV73 1430 aa28.95■■■□□ 2.23
PRNP-202ENST00000424424 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
PRNP-202ENST00000424424 PLXNC1O60486 1568 aa28.93■■■□□ 2.22
PRNP-202ENST00000424424 MAST1Q9Y2H9 1570 aa28.91■■■□□ 2.22
PRNP-202ENST00000424424 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
PRNP-202ENST00000424424 TCOF1Q13428 1488 aaKnown RBP28.89■■■□□ 2.22
PRNP-202ENST00000424424 DHX29Q7Z478 1369 aaKnown RBP28.88■■■□□ 2.21
PRNP-202ENST00000424424 CROCC2H7BZ55 1655 aa28.84■■■□□ 2.21
PRNP-202ENST00000424424 CNTLNQ9NXG0 1405 aa28.83■■■□□ 2.21
PRNP-202ENST00000424424 DNMT1P26358 1616 aaKnown RBP28.83■■■□□ 2.21
PRNP-202ENST00000424424 GGT6Q6P531 493 aa28.82■■■□□ 2.2
PRNP-202ENST00000424424 ABCC5O15440 1437 aa28.8■■■□□ 2.2
PRNP-202ENST00000424424 DAPK1P53355 1430 aa28.8■■■□□ 2.2
PRNP-202ENST00000424424 SHANK2Q9UPX8 1470 aa28.79■■■□□ 2.2
PRNP-202ENST00000424424 FAM50AQ14320 339 aaKnown RBP28.79■■■□□ 2.2
PRNP-202ENST00000424424 KIF3BO15066 747 aa28.78■■■□□ 2.2
PRNP-202ENST00000424424 PPARGC1BQ86YN6 1023 aaKnown RBP28.78■■■□□ 2.2
PRNP-202ENST00000424424 PPP6R1Q9UPN7 881 aa28.78■■■□□ 2.2
PRNP-202ENST00000424424 C3P01024 1663 aa28.77■■■□□ 2.2
PRNP-202ENST00000424424 CEBPAP49715 358 aaPredicted RBP28.77■■■□□ 2.2
PRNP-202ENST00000424424 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
PRNP-202ENST00000424424 CLTCQ00610 1675 aaKnown RBP28.75■■■□□ 2.19
PRNP-202ENST00000424424 SETD1BQ9UPS6 1966 aaKnown RBP28.73■■■□□ 2.19
PRNP-202ENST00000424424 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
PRNP-202ENST00000424424 EIF2AK4Q9P2K8 1649 aaKnown RBP28.7■■■□□ 2.19
PRNP-202ENST00000424424 ZMYM3Q14202 1370 aa28.69■■■□□ 2.18
PRNP-202ENST00000424424 PREX1Q8TCU6 1659 aa28.69■■■□□ 2.18
PRNP-202ENST00000424424 ANKRD30AQ9BXX3 1397 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms